M. musculus Gene: S100a4 - ENSMUSG00000001020 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000001020
NameS100a4
DescriptionS100 calcium binding protein A4 [Source:MGI Symbol;Acc:MGI:1330282]
OrganismMus musculus (mouse)
Synonym(s)18a2, 42a, calvasculin, capl, fsp1, metastasin, mts1, p20066, pel98, pk9a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
78.0
  • 78.0
99.81410
  • 99.81410
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
117
  • 117
  • 128
  • 180
  • 376
  • 1.31e3
99.71992
  • 99.71992
  • 99.69338
  • 99.56818
  • 99.09585
  • 96.84206
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
280
  • 280
99.32578
  • 99.32578
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
302
  • 302
99.27330
  • 99.27330
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
486
  • 486
  • 564
98.83025
  • 98.83025
  • 98.64184
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000061early adult stage
558
  • 558
98.65524
  • 98.65524
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
617
  • 617
98.51265
  • 98.51265
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
845
  • 845
  • 884
97.96185
  • 97.96185
  • 97.86712
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
978
  • 978
  • 991
97.64090
  • 97.64090
  • 97.61060
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.25e3
  • 1.25e3
96.98324
  • 96.98324
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.51e3
  • 1.51e3
  • 9.18e3
  • 9.49e3
96.36408
  • 96.36408
  • 77.84194
  • 77.10043
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.79e3
  • 1.79e3
  • 2.70e3
95.67342
  • 95.67342
  • 93.48566
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.95e3
  • 1.95e3
  • 2.12e3
95.28324
  • 95.28324
  • 94.88996
AEIR
  • AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.98e3
  • 1.98e3
95.21502
  • 95.21502
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.99e3
  • 1.99e3
95.18786
  • 95.18786
AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
2.55e3
  • 2.55e3
93.84114
  • 93.84114
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
3.46e3
  • 3.46e3
  • 5.62e3
  • 5.96e3
91.64655
  • 91.64655
  • 86.43749
  • 85.60794
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.75e3
  • 3.75e3
90.95758
  • 90.95758
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.17e3
  • 4.17e3
89.93421
  • 89.93421
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
4.24e3
  • 4.24e3
89.75857
  • 89.75857
AEIR
  • AEIR
EMAPA:35961embryo mesenchyme (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
5.32e3
  • 5.32e3
87.16982
  • 87.16982
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
5.36e3
  • 5.36e3
87.05094
  • 87.05094
AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
5.81e3
  • 5.81e3
  • 1.15e4
  • 1.31e4
85.97296
  • 85.97296
  • 72.30082
  • 68.26840
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.49e3
  • 6.49e3
84.34208
  • 84.34208
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.55e3
  • 6.55e3
84.19119
  • 84.19119
AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
8.42e3
  • 8.42e3
79.67166
  • 79.67166
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.57e3
  • 8.57e3
79.30179
  • 79.30179
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.83e3
  • 8.83e3
78.67924
  • 78.67924
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
8.84e3
  • 8.84e3
78.65937
  • 78.65937
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
9.53e3
  • 9.53e3
76.99698
  • 76.99698
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
9.57e3
  • 9.57e3
  • 1.15e4
  • 1.26e4
  • 1.67e4
  • 2.31e4
76.88798
  • 76.88798
  • 72.25606
  • 69.65234
  • 59.60893
  • 44.35118
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
9.60e3
  • 9.60e3
  • 1.54e4
  • 2.11e4
76.83643
  • 76.83643
  • 62.94061
  • 49.12571
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
9.62e3
  • 9.62e3
  • 1.33e4
  • 1.43e4
76.76999
  • 76.76999
  • 67.81927
  • 65.43189
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
9.65e3
  • 9.65e3
  • 1.12e4
  • 1.27e4
76.69614
  • 76.69614
  • 73.04628
  • 69.44739
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
9.91e3
  • 9.91e3
76.07598
  • 76.07598
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
9.94e3
  • 9.94e3
76.00529
  • 76.00529
AEIR
  • AEIR
EMAPA:17568metencephalon part of 4th ventricle choroid plexus (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.04e4
  • 1.04e4
74.97948
  • 74.97948
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
70.62914
  • 70.62914
AEIR
  • AEIR
UBERON:0002192ventricular system choroidal fissure
  • MmusDv:0000032Theiler stage 23 (mouse)
1.27e4
  • 1.27e4
69.43358
  • 69.43358
AEIR
  • AEIR
UBERON:0005562thymus primordium
  • MmusDv:0000032Theiler stage 23 (mouse)
1.29e4
  • 1.29e4
68.94621
  • 68.94621
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.37e4
  • 1.37e4
66.93158
  • 66.93158
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.39e4
  • 1.39e4
  • 2.17e4
  • 2.55e4
66.32337
  • 66.32337
  • 47.64273
  • 38.53547
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
1.58e4
  • 1.58e4
61.91309
  • 61.91309
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
58.20203
  • 58.20203
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.77e4
  • 1.77e4
57.30051
  • 57.30051
AEIR
  • AEIR
UBERON:0002102forelimb
  • MmusDv:0000032Theiler stage 23 (mouse)
1.80e4
  • 1.80e4
56.65338
  • 56.65338
AEIR
  • AEIR
UBERON:0003301roof plate of diencephalon
  • MmusDv:0000032Theiler stage 23 (mouse)
1.86e4
  • 1.86e4
54.99155
  • 54.99155
AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
  • 2.51e4
53.16755
  • 53.16755
  • 39.47900
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
52.05456
  • 52.05456
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.20e4
  • 2.20e4
46.82583
  • 46.82583
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
2.44e4
  • 2.44e4
41.05821
  • 41.05821
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.74e4
  • 2.74e4
33.76806
  • 33.76806
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
2.80e4
  • 2.80e4
32.52004
  • 32.52004
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Cross-references

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