M. musculus Gene: Rfx6 - ENSMUSG00000019900 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000019900
NameRfx6
Descriptionregulatory factor X, 6 [Source:MGI Symbol;Acc:MGI:2445208]
OrganismMus musculus (mouse)
Synonym(s)4930572o07rik, q8cdn5, rfxdc1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000925endoderm
  • MmusDv:0000021Theiler stage 14 (mouse)
6.84e3
  • 6.84e3
83.33455
  • 83.33455
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
9.47e3
  • 9.47e3
  • 1.30e4
76.92101
  • 76.92101
  • 68.41041
AEIR
  • AEIR
  • AEIR
UBERON:0009749limb mesenchyme
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.17e4
  • 1.17e4
  • 1.31e4
  • 1.47e4
71.42613
  • 71.42613
  • 68.17572
  • 64.28205
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000024Theiler stage 17 (mouse)
1.17e4
  • 1.17e4
71.42126
  • 71.42126
AEIR
  • AEIR
UBERON:0005870olfactory pit
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.23e4
  • 1.23e4
  • 1.54e4
69.99512
  • 69.99512
  • 62.49877
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000026Theiler stage 19 (mouse)
1.28e4
  • 1.28e4
68.74635
  • 68.74635
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • MmusDv:0000024Theiler stage 17 (mouse)
1.32e4
  • 1.32e4
67.84860
  • 67.84860
AEIR
  • AEIR
UBERON:0001846internal ear
  • MmusDv:0000026Theiler stage 19 (mouse)
1.37e4
  • 1.37e4
66.66179
  • 66.66179
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000026Theiler stage 19 (mouse)
1.37e4
  • 1.37e4
66.65935
  • 66.65935
AEIR
  • AEIR
UBERON:0001264pancreas
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.73e4
  • 2.05e4
64.26377
  • 64.26377
  • 57.72403
  • 49.98781
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005598trunk somite
  • MmusDv:0000026Theiler stage 19 (mouse)
1.54e4
  • 1.54e4
62.49511
  • 62.49511
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
60.03196
  • 60.03196
AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
1.91e4
  • 1.91e4
53.43815
  • 53.43815
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
1.93e4
  • 1.93e4
  • 1.99e4
52.86232
  • 52.86232
  • 51.46374
AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
52.77168
  • 52.77168
AEIR
  • AEIR
UBERON:0003929digestive tract epithelium
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
2.05e4
  • 2.05e4
  • 2.05e4
50.00122
  • 50.00122
  • 50.00000
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.96e4
  • 2.96e4
  • 3.66e4
27.94828
  • 27.94828
  • 10.71846
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Cross-references

CCDSCCDS23835 (CCDS23835.1), CCDS48558 (CCDS48558.1)
EMBLAC153527, AK029809, AK049380, BC132104, BC132294
EnsemblENSMUSG00000019900 (Rfx6)
MGIMGI:2445208 (Rfx6)
Uniprot/SWISSPROTQ8C7R7, RFX6_MOUSE

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