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M. musculus Gene: 9530003J23Rik - ENSMUSG00000020177 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000020177
Name9530003J23Rik
DescriptionRIKEN cDNA 9530003J23 gene [Source:MGI Symbol;Acc:MGI:1924647]
OrganismMus musculus (mouse)
Synonym(s)lyzf1
Orthologs(s)62 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000998seminal vesicle
  • MmusDv:0000061early adult stage
32.2
  • 32.2
99.93
  • 99.93
AEIR
  • AEIR
UBERON:0002090postcranial axial skeleton
  • MmusDv:0000032Theiler stage 23 (mouse)
6.52e3
  • 6.52e3
84.37
  • 84.37
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
6.67e3
  • 6.67e3
  • 2.08e4
  • 2.58e4
83.99
  • 83.99
  • 49.99
  • 38.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000981femur
  • MmusDv:0000032Theiler stage 23 (mouse)
1.01e4
  • 1.01e4
75.79
  • 75.79
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
  • 3.50e4
70.95
  • 70.95
  • 16.13
AEIR
  • AEIR
  • AEIR
UBERON:0000976humerus
  • MmusDv:0000032Theiler stage 23 (mouse)
1.29e4
  • 1.29e4
69.03
  • 69.03
AEIR
  • AEIR
UBERON:0001446fibula
  • MmusDv:0000032Theiler stage 23 (mouse)
1.60e4
  • 1.60e4
61.53
  • 61.53
AEIR
  • AEIR
UBERON:0002228rib
  • MmusDv:0000032Theiler stage 23 (mouse)
1.64e4
  • 1.64e4
60.53
  • 60.53
AEIR
  • AEIR
UBERON:0000979tibia
  • MmusDv:0000032Theiler stage 23 (mouse)
1.67e4
  • 1.67e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0006849scapula
  • MmusDv:0000032Theiler stage 23 (mouse)
1.69e4
  • 1.69e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0007830pelvic girdle bone/zone
  • MmusDv:0000032Theiler stage 23 (mouse)
1.74e4
  • 1.74e4
58.32
  • 58.32
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.74e4
  • 1.74e4
58.30
  • 58.30
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
  • 2.35e4
  • 2.51e4
  • 2.62e4
  • 2.96e4
57.17
  • 57.17
  • 43.55
  • 39.70
  • 37.17
  • 29.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
  • 2.91e4
  • 3.55e4
56.96
  • 56.96
  • 30.24
  • 14.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007221neonate stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.81e4
  • 1.81e4
  • 2.17e4
  • 2.31e4
  • 2.32e4
  • 2.34e4
  • 2.41e4
  • 2.46e4
  • 2.54e4
  • 2.55e4
56.54
  • 56.54
  • 47.96
  • 44.56
  • 44.42
  • 43.93
  • 42.11
  • 40.87
  • 38.96
  • 38.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
  • 2.82e4
  • 3.50e4
55.25
  • 55.25
  • 32.42
  • 16.05
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
52.26
  • 52.26
AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
1.99e4
  • 1.99e4
52.18
  • 52.18
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
2.02e4
  • 2.02e4
  • 3.07e4
51.56
  • 51.56
  • 26.34
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000104life cycle
2.05e4
  • 2.05e4
50.86
  • 50.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
2.05e4
  • 2.05e4
  • 2.23e4
  • 2.36e4
  • 2.44e4
  • 2.56e4
  • 2.65e4
50.74
  • 50.74
  • 46.49
  • 43.41
  • 41.44
  • 38.68
  • 36.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000068embryo stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
  • 2.45e4
  • 2.49e4
  • 2.51e4
  • 2.54e4
  • 2.56e4
  • 2.56e4
  • 2.56e4
  • 2.58e4
  • 2.97e4
  • 2.97e4
  • 3.09e4
47.60
  • 47.60
  • 41.22
  • 40.32
  • 39.86
  • 39.00
  • 38.69
  • 38.59
  • 38.58
  • 38.19
  • 28.80
  • 28.72
  • 25.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
46.86
  • 46.86
AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000026Theiler stage 19 (mouse)
2.22e4
  • 2.22e4
46.65
  • 46.65
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.25e4
  • 2.25e4
  • 3.37e4
46.01
  • 46.01
  • 19.06
AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000024Theiler stage 17 (mouse)
2.26e4
  • 2.26e4
45.88
  • 45.88
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
2.29e4
  • 2.29e4
44.94
  • 44.94
AEIR
  • AEIR
UBERON:0001328lobe of prostate
  • UBERON:0000113post-juvenile adult stage
2.30e4
  • 2.30e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
  • 2.51e4
  • 3.08e4
  • 3.08e4
  • 3.40e4
43.88
  • 43.88
  • 39.71
  • 26.17
  • 26.00
  • 18.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.38e4
  • 2.38e4
  • 2.48e4
  • 2.55e4
  • 3.57e4
42.99
  • 42.99
  • 40.59
  • 38.83
  • 14.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004134proximal tubule
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
2.40e4
  • 2.40e4
  • 2.56e4
42.48
  • 42.48
  • 38.50
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000104life cycle
2.40e4
  • 2.40e4
  • 2.41e4
42.42
  • 42.42
  • 42.06
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
2.43e4
  • 2.43e4
  • 2.91e4
41.58
  • 41.58
  • 30.23
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.45e4
  • 2.45e4
  • 2.48e4
  • 2.51e4
  • 2.59e4
  • 2.66e4
  • 2.96e4
41.29
  • 41.29
  • 40.50
  • 39.70
  • 37.97
  • 36.08
  • 28.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
2.48e4
  • 2.48e4
40.37
  • 40.37
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
2.49e4
  • 2.49e4
40.14
  • 40.14
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.50e4
  • 2.50e4
  • 2.52e4
40.12
  • 40.12
  • 39.41
AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
2.51e4
  • 2.51e4
  • 2.52e4
  • 2.52e4
  • 2.55e4
  • 3.09e4
  • 3.56e4
39.75
  • 39.75
  • 39.63
  • 39.62
  • 38.85
  • 25.81
  • 14.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
2.52e4
  • 2.52e4
39.45
  • 39.45
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:00000633 month-old stage (mouse)
2.53e4
  • 2.53e4
39.34
  • 39.34
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000633 month-old stage (mouse)
2.53e4
  • 2.53e4
  • 2.54e4
  • 2.55e4
  • 2.57e4
  • 2.89e4
  • 2.91e4
  • 2.93e4
  • 3.10e4
39.31
  • 39.31
  • 39.08
  • 38.87
  • 38.26
  • 30.76
  • 30.18
  • 29.64
  • 25.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.55e4
  • 2.55e4
  • 3.07e4
38.82
  • 38.82
  • 26.44
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.68e4
  • 2.68e4
35.61
  • 35.61
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.74e4
  • 2.74e4
  • 3.58e4
34.15
  • 34.15
  • 14.16
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
2.82e4
  • 2.82e4
32.30
  • 32.30
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
2.86e4
  • 2.86e4
31.40
  • 31.40
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • UBERON:0007221neonate stage
2.88e4
  • 2.88e4
30.84
  • 30.84
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
3.00e4
  • 3.00e4
27.98
  • 27.98
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.09e4
  • 3.09e4
25.96
  • 25.96
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
3.11e4
  • 3.11e4
25.25
  • 25.25
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
3.22e4
  • 3.22e4
22.62
  • 22.62
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
3.25e4
  • 3.25e4
21.92
  • 21.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species3 genesCompare expression
Glires3 species5 genesCompare expression
Euarchontoglires7 species9 genesCompare expression
Boreoeutheria11 species13 genesCompare expression
Theria12 species17 genesCompare expression
Mammalia13 species18 genesCompare expression
Tetrapoda14 species19 genesCompare expression
Bilateria20 species62 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000020177.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Muroidea2 genesCompare expression

Paralogy information comes from OMA : ENSMUSG00000020177.

Cross-references

CCDSCCDS24192 (CCDS24192.1)
EnsemblENSMUSG00000020177 (9530003J23Rik)
MGIMGI:1924647 (9530003J23Rik)
EMBLAC139638, AK035441, BC120771, BC120797, CH466539, HG931777
Uniprot/SPTREMBLQ8BM26, Q8BM26_MOUSE

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