M. musculus Gene: Hoxc5 - ENSMUSG00000022485 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000022485
NameHoxc5
Descriptionhomeobox C5 [Source:MGI Symbol;Acc:MGI:96196]
OrganismMus musculus (mouse)
Synonym(s)ai181837, hox-3.4, hox-6.2, hoxc-5, q8bjw4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000080mesonephros
  • MmusDv:0000027Theiler stage 20 (mouse)
1.52e3
  • 1.52e3
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000025Theiler stage 18 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • UBERON:0000104life cycle
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
2.52e3
  • 2.52e3
  • 8.61e3
  • 9.09e3
  • 1.01e4
  • 1.15e4
  • 1.26e4
  • 1.44e4
  • 1.78e4
  • 2.03e4
  • 2.05e4
  • 2.12e4
  • 2.13e4
  • 2.18e4
  • 2.19e4
  • 2.22e4
  • 2.53e4
  • 2.59e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000061early adult stage
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
2.69e3
  • 2.69e3
  • 9.48e3
  • 1.69e4
  • 1.80e4
  • 1.85e4
  • 1.98e4
  • 1.98e4
  • 1.99e4
  • 2.01e4
  • 2.30e4
  • 2.36e4
  • 2.38e4
  • 2.40e4
  • 2.48e4
  • 2.53e4
  • 3.44e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004876urogenital fold
  • MmusDv:0000024Theiler stage 17 (mouse)
2.93e3
  • 2.93e3
AEIR
  • AEIR
UBERON:0006946efferent duct
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
3.03e3
  • 3.03e3
  • 3.44e3
  • 3.64e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • MmusDv:0000022Theiler stage 15 (mouse)
3.32e3
  • 3.32e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00001134-7 days (mouse)
3.76e3
  • 3.76e3
  • 1.22e4
  • 1.34e4
  • 1.36e4
  • 1.68e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000113post-juvenile adult stage
4.32e3
  • 4.32e3
  • 2.05e4
AEIR
  • AEIR
  • AEIR
UBERON:0010412epididymal fat pad
  • MmusDv:0000097late adult stage
  • MmusDv:000005410 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
4.34e3
  • 4.34e3
  • 6.75e3
  • 8.66e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003697abdominal wall
  • MmusDv:0000024Theiler stage 17 (mouse)
4.37e3
  • 4.37e3
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:0000097late adult stage
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000695 month-old stage (mouse)
  • UBERON:0007221neonate stage
4.59e3
  • 4.59e3
  • 5.40e3
  • 7.38e3
  • 7.83e3
  • 8.09e3
  • 8.44e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000113post-juvenile adult stage
4.81e3
  • 4.81e3
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
4.89e3
  • 4.89e3
  • 1.03e4
AEIR
  • AEIR
  • AEIR
UBERON:0003918kidney mesenchyme
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
5.13e3
  • 5.13e3
  • 1.37e4
  • 1.37e4
  • 1.47e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
5.37e3
  • 5.37e3
  • 7.19e3
  • 8.24e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000104life cycle
5.60e3
  • 5.60e3
  • 1.77e4
  • 2.53e4
AEIR
  • AEIR
  • AEIR
  • AEIR
EMAPA:35961embryo mesenchyme (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
5.79e3
  • 5.79e3
AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • MmusDv:00000776 month-old stage (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000451 week (mouse)
5.93e3
  • 5.93e3
  • 9.82e3
  • 1.08e4
  • 1.09e4
  • 1.16e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
6.09e3
  • 6.09e3
AEIR
  • AEIR
UBERON:0001301epididymis
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
6.43e3
  • 6.43e3
  • 7.17e3
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
6.48e3
  • 6.48e3
  • 8.09e3
  • 1.06e4
  • 1.23e4
  • 1.63e4
  • 1.74e4
  • 1.89e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000079male reproductive system
  • MmusDv:0000029Theiler stage 22 (mouse)
6.79e3
  • 6.79e3
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000104life cycle
  • UBERON:0007221neonate stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00001134-7 days (mouse)
6.83e3
  • 6.83e3
  • 7.69e3
  • 9.41e3
  • 9.46e3
  • 1.09e4
  • 1.14e4
  • 1.33e4
  • 1.36e4
  • 1.43e4
  • 1.44e4
  • 1.51e4
  • 1.61e4
  • 1.72e4
  • 1.74e4
  • 1.75e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
EMAPA:19358T1 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
6.84e3
  • 6.84e3
  • 1.37e4
AEIR
  • AEIR
  • AEIR
EMAPA:19359T2 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
6.84e3
  • 6.84e3
  • 1.37e4
AEIR
  • AEIR
  • AEIR
EMAPA:17954early nephron group (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
6.84e3
  • 6.84e3
  • 1.03e4
  • 1.37e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006364ureteric bud tip
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
6.84e3
  • 6.84e3
  • 6.84e3
  • 1.03e4
  • 1.30e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005215kidney interstitium
  • MmusDv:0000032Theiler stage 23 (mouse)
6.84e3
  • 6.84e3
AEIR
  • AEIR
UBERON:0002067dermis
  • MmusDv:0000032Theiler stage 23 (mouse)
6.96e3
  • 6.96e3
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.14e3
  • 7.14e3
  • 1.70e4
  • 1.82e4
  • 1.95e4
  • 2.17e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005107metanephric cap
  • MmusDv:0000032Theiler stage 23 (mouse)
7.18e3
  • 7.18e3
AEIR
  • AEIR
UBERON:0001103diaphragm
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000061early adult stage
7.59e3
  • 7.59e3
  • 1.03e4
  • 1.45e4
  • 2.20e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009117indifferent gonad
  • MmusDv:0000026Theiler stage 19 (mouse)
7.64e3
  • 7.64e3
AEIR
  • AEIR
UBERON:0001017central nervous system
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
7.69e3
  • 7.69e3
  • 1.47e4
  • 1.50e4
  • 1.67e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
  • MmusDv:0000076aged adult stage (mouse)
7.98e3
  • 7.98e3
  • 2.23e4
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000113post-juvenile adult stage
8.39e3
  • 8.39e3
  • 1.69e4
  • 2.34e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001229renal corpuscle
  • MmusDv:0000032Theiler stage 23 (mouse)
8.50e3
  • 8.50e3
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0000112sexually immature stage
8.55e3
  • 8.55e3
AEIR
  • AEIR
UBERON:0001989superior cervical ganglion
  • MmusDv:0000028Theiler stage 21 (mouse)
8.68e3
  • 8.68e3
AEIR
  • AEIR
UBERON:0001276epithelium of stomach
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000104life cycle
8.79e3
  • 8.79e3
  • 2.03e4
AEIR
  • AEIR
  • AEIR
UBERON:0003220metanephric mesenchyme
  • MmusDv:0000026Theiler stage 19 (mouse)
8.85e3
  • 8.85e3
AEIR
  • AEIR
EMAPA:28533male associated reproductive structure (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
9.12e3
  • 9.12e3
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
9.23e3
  • 9.23e3
  • 2.49e4
AEIR
  • AEIR
  • AEIR
UBERON:0005147metanephric renal vesicle
  • MmusDv:0000027Theiler stage 20 (mouse)
9.50e3
  • 9.50e3
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
9.92e3
  • 9.92e3
  • 1.07e4
  • 1.12e4
  • 1.16e4
  • 1.19e4
  • 1.71e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000056ureter
  • MmusDv:0000032Theiler stage 23 (mouse)
9.93e3
  • 9.93e3
AEIR
  • AEIR
UBERON:0001068skin of back
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000495 weeks (mouse)
9.93e3
  • 9.93e3
  • 1.36e4
  • 1.41e4
  • 1.42e4
  • 1.46e4
  • 1.70e4
  • 1.73e4
  • 1.82e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000068embryo stage
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.02e4
  • 1.02e4
  • 1.09e4
  • 1.17e4
  • 1.19e4
  • 1.20e4
  • 1.51e4
  • 1.70e4
  • 1.71e4
  • 1.84e4
  • 1.94e4
  • 2.00e4
  • 2.55e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002257ventral horn of spinal cord
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.60e4
AEIR
  • AEIR
  • AEIR
EMAPA:19349C6 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
1.03e4
  • 1.03e4
AEIR
  • AEIR
EMAPA:19350C7 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.03e4
  • 1.03e4
  • 1.03e4
AEIR
  • AEIR
  • AEIR
EMAPA:19376T8 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.03e4
  • 1.03e4
  • 2.05e4
AEIR
  • AEIR
  • AEIR
EMAPA:19378T10 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.03e4
  • 1.03e4
  • 2.05e4
AEIR
  • AEIR
  • AEIR
EMAPA:19360T3 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.03e4
  • 1.03e4
  • 1.37e4
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.03e4
  • 1.03e4
  • 1.23e4
AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
1.03e4
  • 1.03e4
  • 1.54e4
  • 1.54e4
  • 1.61e4
  • 1.68e4
  • 1.89e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0000112sexually immature stage
1.03e4
  • 1.03e4
AEIR
  • AEIR
UBERON:0005148metanephric S-shaped body
  • MmusDv:0000032Theiler stage 23 (mouse)
1.03e4
  • 1.03e4
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
1.06e4
  • 1.06e4
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
1.07e4
  • 1.07e4
  • 1.14e4
  • 1.36e4
  • 1.59e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005211renal medulla interstitium
  • MmusDv:0000032Theiler stage 23 (mouse)
1.07e4
  • 1.07e4
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00000462 weeks (mouse)
1.08e4
  • 1.08e4
  • 1.20e4
  • 1.55e4
  • 1.56e4
  • 1.57e4
  • 1.73e4
  • 1.73e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.54e4
  • 2.54e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.10e4
  • 1.10e4
  • 1.85e4
AEIR
  • AEIR
  • AEIR
CL:0002607migratory enteric neural crest cell
  • MmusDv:0000029Theiler stage 22 (mouse)
1.10e4
  • 1.10e4
AEIR
  • AEIR
UBERON:0000947aorta
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000506 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000097late adult stage
1.10e4
  • 1.10e4
  • 1.33e4
  • 1.69e4
  • 2.34e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.11e4
  • 1.11e4
  • 1.32e4
  • 1.53e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002360meninx
  • UBERON:0000112sexually immature stage
1.12e4
  • 1.12e4
AEIR
  • AEIR
UBERON:0005151metanephric proximal tubule
  • MmusDv:0000032Theiler stage 23 (mouse)
1.15e4
  • 1.15e4
AEIR
  • AEIR
UBERON:0005294gonadal ridge
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
1.17e4
  • 1.17e4
  • 1.58e4
  • 1.59e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000032Theiler stage 23 (mouse)
1.17e4
  • 1.17e4
AEIR
  • AEIR
UBERON:0009749limb mesenchyme
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.17e4
  • 1.17e4
  • 1.47e4
AEIR
  • AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.17e4
  • 1.17e4
  • 1.23e4
  • 1.37e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001322sciatic nerve
  • MmusDv:0000061early adult stage
1.17e4
  • 1.17e4
AEIR
  • AEIR
UBERON:0005130metanephric loop of Henle
  • MmusDv:0000032Theiler stage 23 (mouse)
1.19e4
  • 1.19e4
AEIR
  • AEIR
UBERON:0001333male urethra
  • MmusDv:0000032Theiler stage 23 (mouse)
1.20e4
  • 1.20e4
AEIR
  • AEIR
UBERON:0009979condyle
  • MmusDv:0000033Theiler stage 24 (mouse)
1.20e4
  • 1.20e4
AEIR
  • AEIR
UBERON:0000081metanephros
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
1.22e4
  • 1.22e4
  • 1.25e4
  • 1.62e4
  • 2.52e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
1.23e4
  • 1.23e4
  • 1.93e4
  • 2.49e4
  • 2.96e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0000112sexually immature stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.23e4
  • 1.23e4
  • 1.42e4
  • 1.78e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0005115metanephric cortical collecting duct
  • MmusDv:0000032Theiler stage 23 (mouse)
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0006241future spinal cord
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.26e4
  • 1.26e4
  • 1.42e4
AEIR
  • AEIR
  • AEIR
UBERON:0005185renal medulla collecting duct
  • MmusDv:0000032Theiler stage 23 (mouse)
1.27e4
  • 1.27e4
AEIR
  • AEIR
UBERON:0000945stomach
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.51e4
  • 1.58e4
  • 1.64e4
  • 1.74e4
  • 2.08e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001950neocortex
  • MmusDv:0000032Theiler stage 23 (mouse)
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0000112sexually immature stage
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0001000vas deferens
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
1.30e4
  • 1.30e4
  • 1.33e4
  • 1.53e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
1.31e4
  • 1.31e4
AEIR
  • AEIR
EMAPA:19361T4 vertebral cartilage condensation (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
1.37e4
  • 1.37e4
  • 1.37e4
AEIR
  • AEIR
  • AEIR
EMAPA:19362T5 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.37e4
  • 1.37e4
  • 2.05e4
AEIR
  • AEIR
  • AEIR
EMAPA:19374T6 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.37e4
  • 1.37e4
  • 2.05e4
AEIR
  • AEIR
  • AEIR
EMAPA:19375T7 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.37e4
  • 1.37e4
  • 2.05e4
AEIR
  • AEIR
  • AEIR
UBERON:0009583spinal cord mantle layer
  • MmusDv:0000027Theiler stage 20 (mouse)
1.37e4
  • 1.37e4
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0000104life cycle
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000506 weeks (mouse)
1.37e4
  • 1.37e4
  • 1.59e4
  • 1.77e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:0000021Theiler stage 14 (mouse)
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.97e4
  • 2.34e4
  • 2.41e4
  • 2.45e4
  • 2.89e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • MmusDv:0000028Theiler stage 21 (mouse)
1.42e4
  • 1.42e4
AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:00000539 weeks (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000695 month-old stage (mouse)
1.42e4
  • 1.42e4
  • 1.47e4
  • 1.53e4
  • 1.65e4
  • 1.94e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005598trunk somite
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.42e4
  • 1.42e4
  • 1.49e4
  • 1.54e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000365urothelium
  • MmusDv:0000032Theiler stage 23 (mouse)
1.45e4
  • 1.45e4
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000506 weeks (mouse)
1.45e4
  • 1.45e4
  • 1.58e4
  • 1.70e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000022Theiler stage 15 (mouse)
1.45e4
  • 1.45e4
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:0000026Theiler stage 19 (mouse)
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0002331umbilical cord
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
AEIR
  • AEIR
UBERON:0001385tibialis anterior
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
1.50e4
  • 1.50e4
  • 1.68e4
AEIR
  • AEIR
  • AEIR
UBERON:0006862diaphysis of femur
  • MmusDv:00000495 weeks (mouse)
1.51e4
  • 1.51e4
AEIR
  • AEIR
UBERON:0001665triceps surae
  • MmusDv:00000495 weeks (mouse)
1.52e4
  • 1.52e4
AEIR
  • AEIR
UBERON:0004347limb bud
  • MmusDv:0000027Theiler stage 20 (mouse)
1.53e4
  • 1.53e4
AEIR
  • AEIR
UBERON:0002108small intestine
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.54e4
  • 1.54e4
  • 1.76e4
  • 2.06e4
  • 2.09e4
  • 2.18e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
EMAPA:17022stomach mesenchyme (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
1.54e4
  • 1.54e4
AEIR
  • AEIR
UBERON:0001976epithelium of esophagus
  • MmusDv:0000027Theiler stage 20 (mouse)
1.54e4
  • 1.54e4
AEIR
  • AEIR
UBERON:0001894diencephalon
  • MmusDv:0000026Theiler stage 19 (mouse)
1.54e4
  • 1.54e4
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
  • 2.07e4
  • 2.27e4
  • 2.30e4
  • 2.36e4
  • 2.62e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:0000026Theiler stage 19 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000539 weeks (mouse)
1.60e4
  • 1.60e4
  • 2.13e4
  • 2.16e4
  • 2.23e4
  • 2.27e4
  • 2.32e4
  • 2.34e4
  • 2.43e4
  • 2.45e4
  • 2.49e4
  • 2.52e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0000068embryo stage
1.60e4
  • 1.60e4
  • 1.80e4
  • 2.41e4
  • 2.44e4
  • 2.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004341primitive streak
  • UBERON:0000068embryo stage
1.62e4
  • 1.62e4
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.63e4
  • 1.63e4
  • 1.88e4
  • 1.90e4
  • 2.03e4
  • 2.21e4
  • 2.27e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
  • 1.70e4
  • 1.82e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007021sexually immature organism
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
1.75e4
  • 1.75e4
  • 2.52e4
AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • UBERON:0007221neonate stage
1.77e4
  • 1.77e4
  • 1.77e4
  • 1.79e4
  • 1.86e4
  • 2.04e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.81e4
  • 1.81e4
  • 2.13e4
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • MmusDv:0000005Theiler stage 02 (mouse)
1.93e4
  • 1.93e4
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:000005410 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0007221neonate stage
2.02e4
  • 2.02e4
  • 2.03e4
  • 2.08e4
  • 2.42e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
2.05e4
  • 2.05e4
  • 2.09e4
  • 2.33e4
  • 2.42e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
EMAPA:19377T9 vertebral cartilage condensation (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.05e4
  • 2.05e4
  • 2.05e4
AEIR
  • AEIR
  • AEIR
EMAPA:19379T11 vertebral cartilage condensation (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
2.05e4
  • 2.05e4
  • 2.05e4
AEIR
  • AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
2.10e4
  • 2.10e4
AEIR
  • AEIR
UBERON:0000323late embryo
  • UBERON:0007220late embryonic stage
2.20e4
  • 2.20e4
AEIR
  • AEIR
UBERON:0002308nucleus of brain
  • MmusDv:0000061early adult stage
2.27e4
  • 2.27e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS27896 (CCDS27896.1)
EMBLAK078527, BC115551, BC115552, U28071
EnsemblENSMUSG00000022485 (Hoxc5)
MGIMGI:96196 (Hoxc5)
Uniprot/SWISSPROTHXC5_MOUSE, P32043

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