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M. musculus Gene: Prph2 - ENSMUSG00000023978 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000023978
NamePrph2
Descriptionperipherin 2 [Source:MGI Symbol;Acc:MGI:102791]
OrganismMus musculus (mouse)
Synonym(s)aofmd, avmd, nmf193, prph, rd-2, rd2, rds, rds {eco:0000313|embl:edl23547.1,gn eco:0000313|mgi:mgi:102791}, rp7, tspan22
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
26.0
  • 26.0
99.94
  • 99.94
AEIR
  • AEIR
UBERON:0000966retina
  • MmusDv:00000495 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:0000061early adult stage
34.9
  • 34.9
  • 97.2
  • 145
  • 2.10e3
  • 5.17e3
  • 6.85e3
  • 7.11e3
  • 7.84e3
  • 8.40e3
  • 8.56e3
  • 1.34e4
  • 1.53e4
  • 1.94e4
99.92
  • 99.92
  • 99.77
  • 99.65
  • 94.97
  • 87.59
  • 83.57
  • 82.94
  • 81.18
  • 79.85
  • 79.46
  • 67.84
  • 63.30
  • 53.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:0000061early adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00001134-7 days (mouse)
368
  • 368
  • 5.73e3
  • 6.19e3
  • 7.00e3
  • 1.43e4
  • 1.75e4
  • 2.40e4
99.12
  • 99.12
  • 86.25
  • 85.15
  • 83.20
  • 65.69
  • 58.00
  • 42.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • MmusDv:0000061early adult stage
4.69e3
  • 4.69e3
88.75
  • 88.75
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
6.05e3
  • 6.05e3
  • 8.07e3
  • 1.74e4
  • 1.80e4
85.49
  • 85.49
  • 80.63
  • 58.35
  • 56.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001803epithelium of lens
  • MmusDv:00000473 weeks (mouse)
9.09e3
  • 9.09e3
78.19
  • 78.19
AEIR
  • AEIR
UBERON:0001782pigmented layer of retina
  • MmusDv:00000622 month-old stage (mouse)
9.72e3
  • 9.72e3
76.67
  • 76.67
AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • UBERON:0000112sexually immature stage
1.04e4
  • 1.04e4
74.99
  • 74.99
AEIR
  • AEIR
UBERON:0002370thymus
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
1.32e4
  • 1.32e4
  • 1.99e4
  • 2.26e4
  • 2.27e4
  • 2.41e4
  • 2.51e4
68.22
  • 68.22
  • 52.14
  • 45.89
  • 45.63
  • 42.19
  • 39.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.71e4
  • 1.71e4
  • 1.76e4
  • 1.90e4
  • 2.51e4
  • 2.55e4
  • 2.65e4
58.92
  • 58.92
  • 57.87
  • 54.41
  • 39.87
  • 38.85
  • 36.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
56.21
  • 56.21
AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
  • 2.47e4
  • 2.50e4
  • 2.59e4
  • 2.79e4
  • 3.05e4
56.16
  • 56.16
  • 40.68
  • 39.97
  • 37.97
  • 33.03
  • 26.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000032Theiler stage 23 (mouse)
2.04e4
  • 2.04e4
  • 2.39e4
  • 2.42e4
  • 2.45e4
51.06
  • 51.06
  • 42.62
  • 41.82
  • 41.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
49.85
  • 49.85
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
2.11e4
  • 2.11e4
  • 2.22e4
  • 2.51e4
  • 2.52e4
  • 2.52e4
  • 2.55e4
  • 3.44e4
49.31
  • 49.31
  • 46.74
  • 39.75
  • 39.63
  • 39.62
  • 38.85
  • 17.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
2.12e4
  • 2.12e4
  • 2.48e4
49.14
  • 49.14
  • 40.41
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
  • 2.40e4
  • 2.41e4
  • 2.43e4
  • 2.50e4
  • 2.51e4
  • 2.55e4
  • 2.56e4
  • 2.88e4
  • 3.14e4
47.75
  • 47.75
  • 42.51
  • 42.26
  • 41.72
  • 39.95
  • 39.86
  • 38.91
  • 38.58
  • 30.83
  • 24.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
46.46
  • 46.46
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
  • 2.47e4
44.39
  • 44.39
  • 40.70
AEIR
  • AEIR
  • AEIR
UBERON:0000964cornea
  • MmusDv:00000451 week (mouse)
  • UBERON:0000104life cycle
2.32e4
  • 2.32e4
  • 2.63e4
44.36
  • 44.36
  • 36.87
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:0000076aged adult stage (mouse)
2.36e4
  • 2.36e4
  • 2.47e4
  • 2.51e4
  • 2.53e4
  • 2.56e4
  • 2.67e4
43.36
  • 43.36
  • 40.74
  • 39.75
  • 39.31
  • 38.56
  • 35.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004134proximal tubule
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
2.40e4
  • 2.40e4
  • 2.68e4
42.48
  • 42.48
  • 35.64
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
2.43e4
  • 2.43e4
  • 3.40e4
41.58
  • 41.58
  • 18.32
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.44e4
  • 2.44e4
  • 2.52e4
41.38
  • 41.38
  • 39.41
AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0000104life cycle
2.47e4
  • 2.47e4
40.84
  • 40.84
AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.48e4
  • 2.48e4
  • 2.92e4
40.49
  • 40.49
  • 29.84
AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.50e4
  • 2.50e4
  • 2.97e4
40.03
  • 40.03
  • 28.68
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
2.74e4
  • 2.74e4
34.25
  • 34.25
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
2.91e4
  • 2.91e4
30.28
  • 30.28
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.05e4
  • 3.05e4
26.85
  • 26.85
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
3.05e4
  • 3.05e4
26.76
  • 26.76
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
3.09e4
  • 3.09e4
25.79
  • 25.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000023978.

Cross-references

CCDSCCDS28844 (CCDS28844.1)
EnsemblENSMUSG00000023978 (Prph2)
MGIMGI:102791 (Prph2)
EMBLAC165289, AK136280, BC028958, BC085266, CH466559, L42167, X14770
Uniprot/SPTREMBLQ3UWK3, Q3UWK3_MOUSE
Uniprot/SWISSPROTP15499, PRPH2_MOUSE

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