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M. musculus Gene: Pou4f3 - ENSMUSG00000024497 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000024497
NamePou4f3
DescriptionPOU domain, class 4, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102523]
OrganismMus musculus (mouse)
Synonym(s)a6h6n6, brn-3.1, brn-3c, brn3.1, brn3c, ddl, dreidel
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0007221neonate stage
  • MmusDv:0000028Theiler stage 21 (mouse)
3.79e3
  • 3.79e3
  • 2.54e4
90.91
  • 90.91
  • 39.05
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:00000451 week (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
4.17e3
  • 4.17e3
  • 1.97e4
  • 2.04e4
  • 2.22e4
  • 2.33e4
  • 2.57e4
  • 2.60e4
90.00
  • 90.00
  • 52.71
  • 51.12
  • 46.64
  • 44.20
  • 38.30
  • 37.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
7.82e3
  • 7.82e3
  • 2.10e4
81.25
  • 81.25
  • 49.69
AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • MmusDv:0000028Theiler stage 21 (mouse)
8.93e3
  • 8.93e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.02e4
  • 1.02e4
  • 1.04e4
  • 1.16e4
  • 1.38e4
  • 1.94e4
  • 2.36e4
75.59
  • 75.59
  • 75.13
  • 72.10
  • 66.99
  • 53.43
  • 43.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000025Theiler stage 18 (mouse)
1.02e4
  • 1.02e4
  • 2.08e4
  • 2.42e4
75.46
  • 75.46
  • 50.06
  • 41.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002227spiral organ of cochlea
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
1.04e4
  • 1.04e4
  • 1.25e4
75.00
  • 75.00
  • 70.00
AEIR
  • AEIR
  • AEIR
UBERON:0009581midbrain mantle layer
  • MmusDv:0000032Theiler stage 23 (mouse)
1.04e4
  • 1.04e4
74.98
  • 74.98
AEIR
  • AEIR
UBERON:0000044dorsal root ganglion
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.13e4
  • 1.13e4
  • 1.63e4
  • 1.65e4
  • 1.67e4
72.84
  • 72.84
  • 60.90
  • 60.52
  • 59.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • MmusDv:0000028Theiler stage 21 (mouse)
1.19e4
  • 1.19e4
71.42
  • 71.42
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • MmusDv:0000032Theiler stage 23 (mouse)
1.22e4
  • 1.22e4
70.82
  • 70.82
AEIR
  • AEIR
UBERON:0001854saccule of membranous labyrinth
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
1.23e4
  • 1.23e4
  • 1.28e4
  • 1.91e4
70.40
  • 70.40
  • 69.25
  • 54.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.24e4
  • 1.24e4
  • 1.32e4
  • 1.52e4
70.18
  • 70.18
  • 68.38
  • 63.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000451 week (mouse)
1.38e4
  • 1.38e4
  • 1.77e4
  • 1.96e4
  • 1.96e4
66.91
  • 66.91
  • 57.60
  • 53.02
  • 52.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001844cochlea
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
1.39e4
  • 1.39e4
  • 2.19e4
  • 2.20e4
  • 2.45e4
  • 2.58e4
66.67
  • 66.67
  • 47.54
  • 47.18
  • 41.10
  • 38.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.42e4
  • 1.42e4
  • 1.65e4
65.91
  • 65.91
  • 60.40
AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0007221neonate stage
1.46e4
  • 1.46e4
  • 1.63e4
  • 1.72e4
  • 1.76e4
  • 1.97e4
  • 2.26e4
64.87
  • 64.87
  • 60.84
  • 58.79
  • 57.84
  • 52.82
  • 45.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006932vestibular epithelium
  • UBERON:0007221neonate stage
1.47e4
  • 1.47e4
64.76
  • 64.76
AEIR
  • AEIR
UBERON:0001690ear
  • UBERON:0007221neonate stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000111organogenesis stage
  • UBERON:0000068embryo stage
  • MmusDv:00000622 month-old stage (mouse)
1.49e4
  • 1.49e4
  • 1.56e4
  • 2.21e4
  • 2.23e4
  • 2.55e4
64.28
  • 64.28
  • 62.50
  • 46.98
  • 46.43
  • 38.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.57e4
  • 1.57e4
  • 1.60e4
  • 1.78e4
62.30
  • 62.30
  • 61.55
  • 57.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
  • 1.95e4
  • 2.41e4
  • 2.43e4
  • 2.43e4
  • 2.46e4
  • 2.48e4
  • 2.50e4
  • 2.51e4
  • 2.55e4
  • 2.55e4
  • 2.56e4
  • 2.56e4
  • 2.77e4
62.26
  • 62.26
  • 53.25
  • 42.08
  • 41.76
  • 41.68
  • 40.88
  • 40.59
  • 39.95
  • 39.65
  • 38.81
  • 38.77
  • 38.59
  • 38.58
  • 33.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001853utricle of membranous labyrinth
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00001134-7 days (mouse)
1.60e4
  • 1.60e4
  • 1.68e4
61.50
  • 61.50
  • 59.80
AEIR
  • AEIR
  • AEIR
UBERON:0003243epithelium of cochlear duct
  • UBERON:0007221neonate stage
1.65e4
  • 1.65e4
60.41
  • 60.41
AEIR
  • AEIR
UBERON:0001894diencephalon
  • MmusDv:0000024Theiler stage 17 (mouse)
1.74e4
  • 1.74e4
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.80e4
  • 1.80e4
56.89
  • 56.89
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.90e4
  • 1.90e4
54.44
  • 54.44
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
1.90e4
  • 1.90e4
54.42
  • 54.42
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000026Theiler stage 19 (mouse)
2.27e4
  • 2.27e4
45.65
  • 45.65
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
  • 2.52e4
  • 2.55e4
  • 2.94e4
43.94
  • 43.94
  • 39.62
  • 38.85
  • 29.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
  • 2.50e4
  • 2.54e4
  • 3.00e4
  • 3.68e4
43.05
  • 43.05
  • 39.94
  • 39.08
  • 28.07
  • 11.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
  • 2.41e4
  • 2.43e4
  • 2.71e4
  • 3.57e4
43.02
  • 43.02
  • 42.10
  • 41.79
  • 35.02
  • 14.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.40e4
  • 2.40e4
  • 2.49e4
  • 3.60e4
42.39
  • 42.39
  • 40.14
  • 13.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001474bone element
  • MmusDv:00000622 month-old stage (mouse)
2.43e4
  • 2.43e4
41.58
  • 41.58
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
2.46e4
  • 2.46e4
  • 2.46e4
  • 2.52e4
  • 2.57e4
  • 2.57e4
41.03
  • 41.03
  • 40.99
  • 39.41
  • 38.33
  • 38.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000056ureter
  • MmusDv:0000032Theiler stage 23 (mouse)
2.47e4
  • 2.47e4
40.73
  • 40.73
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:00000633 month-old stage (mouse)
2.53e4
  • 2.53e4
39.34
  • 39.34
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
2.67e4
  • 2.67e4
  • 3.11e4
  • 3.46e4
35.83
  • 35.83
  • 25.39
  • 17.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
2.70e4
  • 2.70e4
  • 2.72e4
  • 3.43e4
35.26
  • 35.26
  • 34.84
  • 17.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.75e4
  • 2.75e4
34.04
  • 34.04
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.76e4
  • 2.76e4
33.70
  • 33.70
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
2.92e4
  • 2.92e4
30.03
  • 30.03
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
3.01e4
  • 3.01e4
27.66
  • 27.66
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
3.14e4
  • 3.14e4
24.58
  • 24.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000024497.

Cross-references

CCDSCCDS29212 (CCDS29212.1)
EnsemblENSMUSG00000024497 (Pou4f3)
MGIMGI:102523 (Pou4f3)
EMBLBC145941, CH466528, S69352
Uniprot/SWISSPROTPO4F3_MOUSE, Q63955

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