M. musculus Gene: Rp1 - ENSMUSG00000025900 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000025900
NameRp1
Descriptionretinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
OrganismMus musculus (mouse)
Synonym(s)dcdc3, mg145, orp1, oxygen-regulated protein 1, q548q8, rp1h

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • MmusDv:00000451 week (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0007221neonate stage
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000506 weeks (mouse)
81.0
  • 81.0
  • 92.4
  • 125
  • 176
  • 178
  • 188
  • 1.49e3
  • 3.62e3
  • 7.98e3
  • 8.52e3
  • 2.05e4
99.80507
  • 99.80507
  • 99.77709
  • 99.69721
  • 99.57363
  • 99.56836
  • 99.54436
  • 96.36617
  • 91.17906
  • 80.54870
  • 79.23266
  • 49.99512
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000506 weeks (mouse)
359
  • 359
  • 570
  • 1.25e3
  • 4.36e3
  • 5.45e3
  • 8.68e3
  • 1.91e4
  • 2.52e4
99.12629
  • 99.12629
  • 98.61304
  • 96.95988
  • 89.38001
  • 86.71985
  • 78.84261
  • 53.54444
  • 38.68373
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001782pigmented layer of retina
  • MmusDv:00000622 month-old stage (mouse)
638
  • 638
98.44629
  • 98.44629
AEIR
  • AEIR
UBERON:0001803epithelium of lens
  • MmusDv:00000473 weeks (mouse)
2.20e3
  • 2.20e3
94.63934
  • 94.63934
AEIR
  • AEIR
UBERON:0001769iris
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
5.00e3
  • 5.00e3
  • 1.46e4
87.81243
  • 87.81243
  • 64.31917
AEIR
  • AEIR
  • AEIR
UBERON:0001775ciliary body
  • MmusDv:00000622 month-old stage (mouse)
5.03e3
  • 5.03e3
87.74652
  • 87.74652
AEIR
  • AEIR
UBERON:0010307conjunctival fornix
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000451 week (mouse)
1.09e4
  • 1.09e4
  • 1.68e4
73.34927
  • 73.34927
  • 59.11420
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
  • 1.60e4
  • 2.41e4
  • 2.53e4
  • 2.53e4
  • 2.55e4
  • 2.61e4
  • 2.62e4
  • 2.64e4
71.79281
  • 71.79281
  • 60.98923
  • 41.21253
  • 38.34099
  • 38.31527
  • 37.75157
  • 36.35610
  • 36.09952
  • 35.67020
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000964cornea
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000451 week (mouse)
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.70e4
  • 2.04e4
71.55647
  • 71.55647
  • 58.45952
  • 50.23447
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.67e4
  • 2.50e4
  • 2.85e4
65.99147
  • 65.99147
  • 59.29616
  • 39.15659
  • 30.43703
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0007221neonate stage
1.53e4
  • 1.53e4
  • 2.17e4
62.64678
  • 62.64678
  • 46.99676
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
  • 1.81e4
  • 2.50e4
  • 2.57e4
  • 2.57e4
60.58808
  • 60.58808
  • 55.99203
  • 39.07101
  • 37.45904
  • 37.28929
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
1.77e4
  • 1.77e4
  • 2.15e4
  • 2.65e4
56.95617
  • 56.95617
  • 47.47615
  • 35.30450
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
2.01e4
  • 2.01e4
  • 2.08e4
  • 2.52e4
  • 2.52e4
  • 2.55e4
51.09568
  • 51.09568
  • 49.41358
  • 38.66462
  • 38.61058
  • 37.83027
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
2.12e4
  • 2.12e4
48.33519
  • 48.33519
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.13e4
  • 2.13e4
48.16381
  • 48.16381
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.42e4
  • 2.42e4
  • 2.92e4
41.08188
  • 41.08188
  • 28.81984
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000061early adult stage
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
2.46e4
  • 2.46e4
  • 2.51e4
  • 2.51e4
  • 2.56e4
  • 2.67e4
  • 2.75e4
39.93051
  • 39.93051
  • 38.84592
  • 38.75206
  • 37.57892
  • 34.83115
  • 32.89810
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
2.48e4
  • 2.48e4
  • 2.49e4
  • 2.49e4
  • 2.73e4
39.45704
  • 39.45704
  • 39.33669
  • 39.33002
  • 33.44302
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.49e4
  • 2.49e4
  • 2.51e4
  • 2.53e4
  • 2.56e4
  • 2.83e4
39.41221
  • 39.41221
  • 38.77326
  • 38.35110
  • 37.67023
  • 31.05692
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.50e4
  • 2.50e4
  • 2.50e4
  • 2.51e4
  • 2.51e4
  • 2.55e4
39.02218
  • 39.02218
  • 38.95409
  • 38.79937
  • 38.79101
  • 37.95983
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • MmusDv:0000005Theiler stage 02 (mouse)
2.52e4
  • 2.52e4
38.59376
  • 38.59376
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000021Theiler stage 14 (mouse)
2.61e4
  • 2.61e4
36.33671
  • 36.33671
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

CCDSCCDS14804 (CCDS14804.1)
EMBLAF155141, AF291754, BC120927, BC120928
EnsemblENSMUSG00000025900 (Rp1)
MGIMGI:1341105 (Rp1)
Uniprot/SWISSPROTP56716, RP1_MOUSE

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