M. musculus Gene: Tmco5 - ENSMUSG00000027355 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000027355
NameTmco5
Descriptiontransmembrane and coiled-coil domains 5 [Source:MGI Symbol;Acc:MGI:1914606]
OrganismMus musculus (mouse)
Synonym(s)1700095f04rik, a2arb1, q9cvn5, tmco5a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000506 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000462 weeks (mouse)
135
  • 135
  • 288
  • 626
  • 633
  • 652
  • 736
  • 751
  • 974
  • 1.39e3
  • 2.21e3
  • 5.13e3
  • 1.99e4
99.67648
  • 99.67648
  • 99.30599
  • 98.49039
  • 98.47533
  • 98.42825
  • 98.22607
  • 98.18991
  • 97.65029
  • 96.65352
  • 94.66325
  • 87.62690
  • 52.06719
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
326
  • 326
99.21535
  • 99.21535
AEIR
  • AEIR
UBERON:0001343seminiferous tubule of testis
  • MmusDv:00000622 month-old stage (mouse)
803
  • 803
98.06429
  • 98.06429
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
4.82e3
  • 4.82e3
88.37760
  • 88.37760
AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000506 weeks (mouse)
9.39e3
  • 9.39e3
  • 1.61e4
  • 2.35e4
  • 2.35e4
77.33426
  • 77.33426
  • 61.21630
  • 43.28822
  • 43.27588
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.08e4
  • 1.08e4
73.99454
  • 73.99454
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
73.17629
  • 73.17629
AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:000005410 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.18e4
  • 1.18e4
  • 1.44e4
  • 2.16e4
  • 2.32e4
  • 2.40e4
  • 2.44e4
  • 2.47e4
  • 2.49e4
  • 2.50e4
  • 2.52e4
  • 2.53e4
  • 2.54e4
  • 2.55e4
71.60550
  • 71.60550
  • 65.16796
  • 47.77120
  • 44.04807
  • 42.02211
  • 41.14705
  • 40.28078
  • 39.80879
  • 39.75234
  • 39.09227
  • 38.94536
  • 38.65980
  • 38.47859
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000695 month-old stage (mouse)
1.18e4
  • 1.18e4
  • 1.90e4
  • 2.34e4
  • 2.34e4
  • 2.35e4
  • 2.48e4
  • 2.51e4
  • 2.54e4
  • 2.54e4
71.59826
  • 71.59826
  • 54.09611
  • 43.62622
  • 43.48928
  • 43.30022
  • 40.08030
  • 39.50867
  • 38.73788
  • 38.68322
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.31e4
  • 1.31e4
68.37636
  • 68.37636
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
65.37943
  • 65.37943
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
65.28124
  • 65.28124
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.48e4
  • 1.48e4
64.18547
  • 64.18547
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000097late adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
1.71e4
  • 1.71e4
  • 2.17e4
  • 2.35e4
  • 2.39e4
  • 2.44e4
  • 2.49e4
  • 2.65e4
  • 2.79e4
  • 2.81e4
58.61494
  • 58.61494
  • 47.73042
  • 43.18298
  • 42.25430
  • 41.18667
  • 39.88095
  • 36.08783
  • 32.54901
  • 32.04191
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000462 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
  • 1.88e4
  • 1.89e4
  • 2.28e4
  • 2.36e4
  • 2.47e4
  • 2.51e4
  • 2.53e4
57.28945
  • 57.28945
  • 54.56400
  • 54.43163
  • 45.01743
  • 42.94734
  • 40.40954
  • 39.42347
  • 38.97125
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
  • 2.12e4
  • 2.47e4
  • 2.54e4
54.51296
  • 54.51296
  • 48.75338
  • 40.47554
  • 38.70036
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009953post-embryonic organism
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
52.35922
  • 52.35922
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.01e4
  • 2.01e4
  • 2.23e4
51.43035
  • 51.43035
  • 46.11197
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • MmusDv:00000484 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.02e4
  • 2.02e4
  • 2.23e4
  • 2.50e4
  • 3.10e4
  • 3.41e4
51.14341
  • 51.14341
  • 46.23455
  • 39.59232
  • 25.27808
  • 17.64300
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
2.05e4
  • 2.05e4
  • 2.43e4
  • 2.48e4
  • 2.49e4
  • 3.09e4
50.56992
  • 50.56992
  • 41.39083
  • 40.02776
  • 39.90089
  • 25.52045
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
2.14e4
  • 2.14e4
  • 2.50e4
48.32129
  • 48.32129
  • 39.59293
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
2.26e4
  • 2.26e4
  • 2.31e4
  • 2.34e4
  • 2.51e4
45.55135
  • 45.55135
  • 44.30287
  • 43.41970
  • 39.33573
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • MmusDv:0000061early adult stage
2.28e4
  • 2.28e4
44.95746
  • 44.95746
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.29e4
  • 2.29e4
  • 2.53e4
  • 2.54e4
  • 2.59e4
  • 2.69e4
44.63817
  • 44.63817
  • 38.84522
  • 38.79133
  • 37.48061
  • 35.08066
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.33e4
  • 2.33e4
43.74874
  • 43.74874
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.41e4
  • 2.41e4
  • 2.41e4
  • 2.43e4
  • 2.49e4
41.78165
  • 41.78165
  • 41.78028
  • 41.35734
  • 39.92479
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
2.43e4
  • 2.43e4
  • 2.49e4
  • 2.58e4
  • 3.03e4
  • 3.13e4
41.31009
  • 41.31009
  • 39.94804
  • 37.64319
  • 26.78380
  • 24.40051
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002308nucleus of brain
  • MmusDv:0000061early adult stage
2.43e4
  • 2.43e4
41.27424
  • 41.27424
AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
2.44e4
  • 2.44e4
  • 2.48e4
41.03213
  • 41.03213
  • 40.19623
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
2.45e4
  • 2.45e4
  • 2.45e4
40.87755
  • 40.87755
  • 40.83945
AEIR
  • AEIR
  • AEIR
UBERON:0001950neocortex
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
2.49e4
  • 2.49e4
  • 2.49e4
39.97588
  • 39.97588
  • 39.82846
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.49e4
  • 2.49e4
  • 2.50e4
  • 2.57e4
  • 2.97e4
  • 3.64e4
39.93964
  • 39.93964
  • 39.59061
  • 37.85374
  • 28.22595
  • 12.03230
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.49e4
  • 2.49e4
39.92677
  • 39.92677
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000644 month-old stage (mouse)
2.49e4
  • 2.49e4
  • 2.52e4
39.85671
  • 39.85671
  • 39.27726
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.50e4
  • 2.50e4
  • 3.29e4
39.73315
  • 39.73315
  • 20.53776
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
2.50e4
  • 2.50e4
39.67750
  • 39.67750
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000462 weeks (mouse)
2.52e4
  • 2.52e4
  • 2.53e4
  • 2.53e4
39.22274
  • 39.22274
  • 38.96854
  • 38.89672
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.61e4
  • 2.61e4
36.91118
  • 36.91118
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
3.15e4
  • 3.15e4
  • 3.46e4
23.88858
  • 23.88858
  • 16.53414
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
3.27e4
  • 3.27e4
20.99720
  • 20.99720
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

CCDSCCDS16569 (CCDS16569.1)
EMBLAK007078, AK007251, AL845318, BC049568
EnsemblENSMUSG00000027355 (Tmco5)
MGIMGI:1914606 (Tmco5)
Uniprot/SPTREMBLZ4YLS6, Z4YLS6_MOUSE
Uniprot/SWISSPROTQ9D9D5, TMC5A_MOUSE

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