M. musculus Gene: Cth - ENSMUSG00000028179 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000028179
NameCth
Descriptioncystathionase (cystathionine gamma-lyase) [Source:MGI Symbol;Acc:MGI:1339968]
OrganismMus musculus (mouse)
Synonym(s)0610010i13rik, ai314617, bc019483, cse, cys3, q6h324

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
262
  • 262
99.37
  • 99.37
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000776 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000104life cycle
267
  • 267
  • 285
  • 437
  • 461
  • 482
  • 721
  • 4.74e3
  • 1.83e4
99.36
  • 99.36
  • 99.31
  • 98.95
  • 98.89
  • 98.84
  • 98.26
  • 88.57
  • 55.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
848
  • 848
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • MmusDv:00000506 weeks (mouse)
1.04e3
  • 1.04e3
  • 1.09e3
  • 3.44e3
  • 1.82e4
  • 2.07e4
97.49
  • 97.49
  • 97.38
  • 91.71
  • 56.06
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000029Theiler stage 22 (mouse)
1.05e3
  • 1.05e3
  • 3.22e3
97.47
  • 97.47
  • 92.24
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.82e3
  • 1.82e3
95.61
  • 95.61
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.96e3
  • 1.96e3
95.26
  • 95.26
AEIR
  • AEIR
UBERON:0004637otic capsule
  • MmusDv:0000032Theiler stage 23 (mouse)
2.01e3
  • 2.01e3
95.16
  • 95.16
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.08e3
  • 2.08e3
94.98
  • 94.98
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
2.40e3
  • 2.40e3
94.22
  • 94.22
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.56e3
  • 2.56e3
93.83
  • 93.83
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
3.33e3
  • 3.33e3
91.97
  • 91.97
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
3.64e3
  • 3.64e3
  • 5.31e3
  • 5.62e3
  • 6.12e3
91.22
  • 91.22
  • 87.19
  • 86.43
  • 85.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
3.65e3
  • 3.65e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
3.70e3
  • 3.70e3
  • 5.30e3
  • 5.40e3
91.06
  • 91.06
  • 87.21
  • 86.96
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
4.11e3
  • 4.11e3
90.08
  • 90.08
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000029Theiler stage 22 (mouse)
4.22e3
  • 4.22e3
  • 8.63e3
89.81
  • 89.81
  • 79.16
AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
4.29e3
  • 4.29e3
89.64
  • 89.64
AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
5.37e3
  • 5.37e3
  • 1.18e4
  • 1.20e4
87.03
  • 87.03
  • 71.58
  • 70.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005253head mesenchyme
  • MmusDv:0000032Theiler stage 23 (mouse)
6.10e3
  • 6.10e3
85.28
  • 85.28
AEIR
  • AEIR
UBERON:0001862vestibular labyrinth
  • MmusDv:0000029Theiler stage 22 (mouse)
6.21e3
  • 6.21e3
85.00
  • 85.00
AEIR
  • AEIR
UBERON:0002091appendicular skeleton
  • MmusDv:0000029Theiler stage 22 (mouse)
6.21e3
  • 6.21e3
85.00
  • 85.00
AEIR
  • AEIR
UBERON:0003128cranium
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
6.21e3
  • 6.21e3
  • 6.48e3
85.00
  • 85.00
  • 84.37
AEIR
  • AEIR
  • AEIR
UBERON:0004535cardiovascular system
  • MmusDv:0000029Theiler stage 22 (mouse)
6.21e3
  • 6.21e3
85.00
  • 85.00
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
6.39e3
  • 6.39e3
  • 9.06e3
84.57
  • 84.57
  • 78.12
AEIR
  • AEIR
  • AEIR
UBERON:0001008renal system
  • MmusDv:0000029Theiler stage 22 (mouse)
7.53e3
  • 7.53e3
81.82
  • 81.82
AEIR
  • AEIR
UBERON:0001043esophagus
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000032Theiler stage 23 (mouse)
7.53e3
  • 7.53e3
  • 1.11e4
  • 1.83e4
81.82
  • 81.82
  • 73.29
  • 55.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002360meninx
  • MmusDv:0000029Theiler stage 22 (mouse)
7.53e3
  • 7.53e3
81.82
  • 81.82
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
7.61e3
  • 7.61e3
  • 7.65e3
  • 8.88e3
81.63
  • 81.63
  • 81.53
  • 78.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001015musculature
  • MmusDv:0000029Theiler stage 22 (mouse)
7.97e3
  • 7.97e3
80.77
  • 80.77
AEIR
  • AEIR
UBERON:0006231facial bone primordium
  • MmusDv:0000029Theiler stage 22 (mouse)
7.97e3
  • 7.97e3
80.77
  • 80.77
AEIR
  • AEIR
UBERON:0035007nasal concha cartilage
  • MmusDv:0000032Theiler stage 23 (mouse)
8.02e3
  • 8.02e3
80.63
  • 80.63
AEIR
  • AEIR
UBERON:0002102forelimb
  • MmusDv:0000029Theiler stage 22 (mouse)
8.29e3
  • 8.29e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002103hindlimb
  • MmusDv:0000029Theiler stage 22 (mouse)
8.29e3
  • 8.29e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0005409alimentary part of gastrointestinal system
  • MmusDv:0000029Theiler stage 22 (mouse)
8.29e3
  • 8.29e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • MmusDv:0000029Theiler stage 22 (mouse)
8.29e3
  • 8.29e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:0000029Theiler stage 22 (mouse)
8.29e3
  • 8.29e3
79.99
  • 79.99
AEIR
  • AEIR
UBERON:0001844cochlea
  • MmusDv:0000029Theiler stage 22 (mouse)
8.53e3
  • 8.53e3
79.41
  • 79.41
AEIR
  • AEIR
UBERON:0003133reproductive organ
  • MmusDv:0000029Theiler stage 22 (mouse)
8.63e3
  • 8.63e3
79.16
  • 79.16
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
8.88e3
  • 8.88e3
  • 1.03e4
  • 1.29e4
  • 1.45e4
78.57
  • 78.57
  • 75.13
  • 68.78
  • 64.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • MmusDv:0000029Theiler stage 22 (mouse)
8.88e3
  • 8.88e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
8.88e3
  • 8.88e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0003451lower jaw incisor
  • MmusDv:0000032Theiler stage 23 (mouse)
8.88e3
  • 8.88e3
78.56
  • 78.56
AEIR
  • AEIR
UBERON:0002371bone marrow
  • MmusDv:00000528 weeks (mouse)
8.97e3
  • 8.97e3
78.36
  • 78.36
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
8.98e3
  • 8.98e3
78.33
  • 78.33
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0007221neonate stage
9.06e3
  • 9.06e3
  • 1.06e4
  • 1.12e4
  • 1.89e4
78.12
  • 78.12
  • 74.36
  • 72.88
  • 54.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • MmusDv:0000029Theiler stage 22 (mouse)
9.06e3
  • 9.06e3
78.12
  • 78.12
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000451 week (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
9.17e3
  • 9.17e3
  • 9.32e3
  • 1.25e4
  • 1.30e4
  • 1.30e4
77.86
  • 77.86
  • 77.50
  • 69.85
  • 68.61
  • 68.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
9.37e3
  • 9.37e3
77.37
  • 77.37
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000061early adult stage
9.45e3
  • 9.45e3
77.19
  • 77.19
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
9.72e3
  • 9.72e3
76.54
  • 76.54
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • MmusDv:0000029Theiler stage 22 (mouse)
9.75e3
  • 9.75e3
76.46
  • 76.46
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • MmusDv:0000029Theiler stage 22 (mouse)
9.75e3
  • 9.75e3
76.46
  • 76.46
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
9.95e3
  • 9.95e3
  • 1.20e4
  • 2.02e4
75.97
  • 75.97
  • 70.98
  • 51.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007221neonate stage
  • MmusDv:00000633 month-old stage (mouse)
1.03e4
  • 1.03e4
  • 1.30e4
  • 1.53e4
  • 3.09e4
75.02
  • 75.02
  • 68.68
  • 63.15
  • 25.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001950neocortex
  • MmusDv:0000029Theiler stage 22 (mouse)
1.04e4
  • 1.04e4
74.99
  • 74.99
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000528 weeks (mouse)
1.04e4
  • 1.04e4
  • 1.14e4
74.99
  • 74.99
  • 72.58
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
73.49
  • 73.49
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
72.93
  • 72.93
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
1.13e4
  • 1.13e4
72.73
  • 72.73
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000068embryo stage
1.13e4
  • 1.13e4
  • 2.07e4
72.72
  • 72.72
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 1.88e4
  • 1.89e4
72.36
  • 72.36
  • 54.72
  • 54.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
72.16
  • 72.16
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
72.01
  • 72.01
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.16e4
  • 1.16e4
71.94
  • 71.94
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
1.24e4
  • 1.24e4
  • 1.27e4
  • 1.29e4
  • 1.33e4
69.99
  • 69.99
  • 69.38
  • 68.91
  • 67.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
  • 1.25e4
69.99
  • 69.99
  • 69.88
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
69.88
  • 69.88
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.27e4
  • 1.27e4
69.41
  • 69.41
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
69.21
  • 69.21
AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
1.30e4
  • 1.30e4
68.68
  • 68.68
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.31e4
  • 1.31e4
68.43
  • 68.43
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
1.36e4
  • 1.36e4
67.09
  • 67.09
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000015Theiler stage 10 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000011Theiler stage 07 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
1.36e4
  • 1.36e4
  • 1.41e4
  • 1.63e4
  • 1.73e4
  • 1.80e4
  • 1.83e4
  • 1.96e4
67.05
  • 67.05
  • 65.89
  • 60.58
  • 58.31
  • 56.63
  • 55.78
  • 52.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
66.25
  • 66.25
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.53e4
  • 1.53e4
  • 1.79e4
63.12
  • 63.12
  • 56.87
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
62.68
  • 62.68
AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
  • 1.97e4
  • 2.10e4
62.20
  • 62.20
  • 52.52
  • 49.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:00192504-8 cell stage embryo
  • MmusDv:0000006Theiler stage 03 (mouse)
1.60e4
  • 1.60e4
61.42
  • 61.42
AEIR
  • AEIR
UBERON:0009953post-embryonic organism
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
1.74e4
  • 1.74e4
  • 2.07e4
58.04
  • 58.04
  • 49.98
AEIR
  • AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
1.80e4
  • 1.80e4
56.44
  • 56.44
AEIR
  • AEIR
UBERON:0000966retina
  • MmusDv:0000029Theiler stage 22 (mouse)
1.99e4
  • 1.99e4
51.85
  • 51.85
AEIR
  • AEIR
UBERON:0007798vascular system
  • UBERON:0000113post-juvenile adult stage
2.07e4
  • 2.07e4
49.97
  • 49.97
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
2.12e4
  • 2.12e4
48.90
  • 48.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Cross-references

CCDSCCDS51101 (CCDS51101.1)
EMBLAY083352, AY262829, BC019483, CH466532
EnsemblENSMUSG00000028179 (Cth)
MGIMGI:1339968 (Cth)
Uniprot/SWISSPROTCGL_MOUSE, Q8VCN5

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