M. musculus Gene: Ssmem1 - ENSMUSG00000029784 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000029784
NameSsmem1
Descriptionserine-rich single-pass membrane protein 1 [Source:MGI Symbol;Acc:MGI:1922897]
OrganismMus musculus (mouse)
Synonym(s)1700016k02rik, 1700025e21rik, 1700025e21rik {eco:0000313|embl:edl13740.1,gn eco:0000313|mgi:mgi:1922897}, 1700025e21rik {eco:0000313|embl:edl13741.1,gn eco:0000313|mgi:mgi:1922897}

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • UBERON:0007221neonate stage
430
  • 430
  • 1.04e3
  • 1.12e3
  • 1.19e3
  • 1.28e3
  • 1.35e3
  • 1.46e3
  • 1.48e3
  • 1.54e3
  • 1.61e3
  • 2.84e3
  • 3.40e3
  • 1.96e4
  • 2.34e4
98.95447
  • 98.95447
  • 97.47437
  • 97.27220
  • 97.09689
  • 96.87946
  • 96.71376
  • 96.43905
  • 96.38820
  • 96.25258
  • 96.06735
  • 93.06988
  • 91.71712
  • 52.12529
  • 43.07562
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001343seminiferous tubule of testis
  • MmusDv:00000622 month-old stage (mouse)
961
  • 961
97.65974
  • 97.65974
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.64e3
  • 7.64e3
  • 2.53e4
81.38776
  • 81.38776
  • 38.44200
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
1.32e4
  • 1.32e4
  • 2.43e4
  • 2.48e4
  • 2.49e4
67.72065
  • 67.72065
  • 40.86969
  • 39.46112
  • 39.41394
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.48e4
  • 1.48e4
  • 1.59e4
  • 1.69e4
  • 2.13e4
  • 2.34e4
  • 2.48e4
  • 2.50e4
63.83683
  • 63.83683
  • 61.22987
  • 58.71841
  • 48.05952
  • 42.84532
  • 39.62711
  • 39.15659
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.54e4
  • 1.54e4
  • 1.71e4
62.35954
  • 62.35954
  • 58.38910
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000068embryo stage
1.80e4
  • 1.80e4
  • 2.07e4
  • 2.35e4
  • 2.46e4
  • 2.46e4
  • 2.53e4
  • 2.53e4
56.05517
  • 56.05517
  • 49.51371
  • 42.71353
  • 40.15893
  • 40.03281
  • 38.29692
  • 38.28310
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.98e4
  • 1.98e4
  • 2.47e4
51.74628
  • 51.74628
  • 39.77740
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.99e4
  • 1.99e4
  • 2.16e4
  • 2.37e4
  • 2.49e4
  • 2.54e4
  • 2.56e4
51.41238
  • 51.41238
  • 47.44161
  • 42.23461
  • 39.36260
  • 38.10249
  • 37.57892
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000024Theiler stage 17 (mouse)
2.01e4
  • 2.01e4
50.98380
  • 50.98380
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.03e4
  • 2.03e4
  • 2.49e4
  • 2.52e4
  • 2.56e4
  • 2.74e4
50.55194
  • 50.55194
  • 39.41221
  • 38.60009
  • 37.67023
  • 33.25805
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.04e4
  • 2.04e4
  • 2.44e4
50.24792
  • 50.24792
  • 40.62960
AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
2.06e4
  • 2.06e4
49.77940
  • 49.77940
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.13e4
  • 2.13e4
48.01136
  • 48.01136
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.17e4
  • 2.17e4
  • 2.17e4
  • 2.38e4
  • 2.63e4
  • 2.66e4
47.13720
  • 47.13720
  • 47.09143
  • 41.89704
  • 35.93831
  • 35.22558
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.21e4
  • 2.21e4
  • 2.47e4
  • 2.49e4
  • 2.77e4
46.06950
  • 46.06950
  • 39.85065
  • 39.19356
  • 32.38548
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
2.22e4
  • 2.22e4
  • 2.46e4
  • 2.51e4
  • 2.52e4
  • 2.52e4
46.00419
  • 46.00419
  • 40.06500
  • 38.79791
  • 38.66462
  • 38.61058
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
2.47e4
  • 2.47e4
  • 2.47e4
39.74740
  • 39.74740
  • 39.74045
AEIR
  • AEIR
  • AEIR
UBERON:0001844cochlea
  • MmusDv:00000539 weeks (mouse)
2.49e4
  • 2.49e4
39.37436
  • 39.37436
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
2.50e4
  • 2.50e4
  • 2.51e4
  • 2.52e4
  • 2.55e4
  • 2.63e4
39.02218
  • 39.02218
  • 38.79101
  • 38.57984
  • 37.95983
  • 35.89179
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.85e4
  • 2.85e4
30.62370
  • 30.62370
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
2.94e4
  • 2.94e4
28.31188
  • 28.31188
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.10e4
  • 3.10e4
24.32286
  • 24.32286
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS19973 (CCDS19973.1), CCDS57417 (CCDS57417.1)
EMBLAC155848, AK006038, AK006332, CH466533
EnsemblENSMUSG00000029784 (Ssmem1)
MGIMGI:1922897 (Ssmem1)
Uniprot/SPTREMBLD3Z3E1, D3Z3E1_MOUSE, Q9D9Y8, Q9D9Y8_MOUSE, Q9DAA0, Q9DAA0_MOUSE

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