M. musculus Gene: Ssmem1 - ENSMUSG00000029784 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000029784
NameSsmem1
Descriptionserine-rich single-pass membrane protein 1 [Source:MGI Symbol;Acc:MGI:1922897]
OrganismMus musculus (mouse)
Synonym(s)1700016k02rik, 1700025e21rik, 1700025e21rik {eco:0000313|embl:edl13740.1,gn eco:0000313|mgi:mgi:1922897}, 1700025e21rik {eco:0000313|embl:edl13741.1,gn eco:0000313|mgi:mgi:1922897}

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000473 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • UBERON:0007221neonate stage
388
  • 388
  • 918
  • 1.13e3
  • 1.19e3
  • 1.26e3
  • 1.28e3
  • 1.47e3
  • 1.49e3
  • 1.55e3
  • 2.64e3
  • 2.78e3
  • 3.42e3
  • 1.80e4
  • 2.24e4
99.07
  • 99.07
  • 97.79
  • 97.28
  • 97.12
  • 96.97
  • 96.91
  • 96.45
  • 96.40
  • 96.26
  • 93.62
  • 93.29
  • 91.74
  • 56.43
  • 46.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
820
  • 820
98.02
  • 98.02
AEIR
  • AEIR
UBERON:0001343seminiferous tubule of testis
  • MmusDv:00000622 month-old stage (mouse)
967
  • 967
97.67
  • 97.67
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.67e3
  • 1.67e3
95.98
  • 95.98
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.69e3
  • 7.69e3
  • 2.54e4
81.44
  • 81.44
  • 38.71
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
  • 2.90e4
68.68
  • 68.68
  • 30.01
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
  • 2.43e4
  • 2.50e4
  • 2.70e4
67.82
  • 67.82
  • 41.30
  • 39.59
  • 34.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.34e4
  • 1.34e4
67.56
  • 67.56
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
64.60
  • 64.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.49e4
  • 1.49e4
  • 1.56e4
  • 1.66e4
  • 2.15e4
  • 2.35e4
  • 2.48e4
  • 2.51e4
63.94
  • 63.94
  • 62.45
  • 59.95
  • 48.21
  • 43.27
  • 40.20
  • 39.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.50e4
  • 1.50e4
  • 1.56e4
  • 1.88e4
  • 1.93e4
63.71
  • 63.71
  • 62.25
  • 54.72
  • 53.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.54e4
  • 1.54e4
  • 1.72e4
62.72
  • 62.72
  • 58.51
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.69e4
  • 1.69e4
  • 1.78e4
  • 2.08e4
59.24
  • 59.24
  • 57.07
  • 49.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
1.71e4
  • 1.71e4
  • 2.64e4
  • 2.67e4
58.73
  • 58.73
  • 36.23
  • 35.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000068embryo stage
  • MmusDv:00000633 month-old stage (mouse)
1.81e4
  • 1.81e4
  • 2.07e4
  • 2.34e4
  • 2.47e4
  • 2.48e4
  • 2.49e4
  • 2.50e4
  • 2.55e4
  • 2.55e4
  • 2.57e4
56.18
  • 56.18
  • 50.00
  • 43.45
  • 40.34
  • 40.21
  • 39.83
  • 39.75
  • 38.48
  • 38.46
  • 38.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.97e4
  • 1.97e4
  • 2.48e4
52.50
  • 52.50
  • 40.01
AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
1.99e4
  • 1.99e4
51.91
  • 51.91
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.99e4
  • 1.99e4
  • 2.49e4
51.89
  • 51.89
  • 39.95
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
2.00e4
  • 2.00e4
  • 2.17e4
  • 2.37e4
  • 2.44e4
  • 2.57e4
  • 2.89e4
51.72
  • 51.72
  • 47.60
  • 42.68
  • 41.14
  • 37.90
  • 30.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000024Theiler stage 17 (mouse)
2.02e4
  • 2.02e4
51.13
  • 51.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.04e4
  • 2.04e4
  • 2.50e4
  • 2.54e4
  • 2.57e4
  • 2.74e4
50.70
  • 50.70
  • 39.59
  • 38.79
  • 37.85
  • 33.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.05e4
  • 2.05e4
  • 2.49e4
50.39
  • 50.39
  • 39.92
AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
2.06e4
  • 2.06e4
50.26
  • 50.26
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
2.08e4
  • 2.08e4
49.79
  • 49.79
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
2.09e4
  • 2.09e4
49.45
  • 49.45
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
2.13e4
  • 2.13e4
48.52
  • 48.52
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.15e4
  • 2.15e4
48.16
  • 48.16
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
2.17e4
  • 2.17e4
  • 2.47e4
  • 2.53e4
  • 2.53e4
  • 2.54e4
47.70
  • 47.70
  • 40.45
  • 39.03
  • 38.85
  • 38.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.18e4
  • 2.18e4
  • 2.19e4
  • 2.36e4
  • 2.64e4
  • 2.67e4
47.29
  • 47.29
  • 47.25
  • 42.98
  • 36.20
  • 35.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.22e4
  • 2.22e4
  • 2.48e4
  • 2.51e4
  • 2.78e4
46.38
  • 46.38
  • 40.03
  • 39.37
  • 32.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.26e4
  • 2.26e4
45.35
  • 45.35
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
2.41e4
  • 2.41e4
41.92
  • 41.92
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.44e4
  • 2.44e4
41.14
  • 41.14
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.45e4
  • 2.45e4
40.88
  • 40.88
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0000104life cycle
2.46e4
  • 2.46e4
40.73
  • 40.73
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
2.46e4
  • 2.46e4
40.61
  • 40.61
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000029Theiler stage 22 (mouse)
2.47e4
  • 2.47e4
40.30
  • 40.30
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
2.49e4
  • 2.49e4
  • 2.49e4
39.92
  • 39.92
  • 39.92
AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
2.50e4
  • 2.50e4
  • 2.51e4
  • 2.51e4
  • 2.54e4
  • 3.93e4
39.64
  • 39.64
  • 39.52
  • 39.51
  • 38.74
  • 5.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001844cochlea
  • MmusDv:00000539 weeks (mouse)
2.50e4
  • 2.50e4
39.55
  • 39.55
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:00000633 month-old stage (mouse)
2.52e4
  • 2.52e4
39.22
  • 39.22
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
2.52e4
  • 2.52e4
  • 2.53e4
  • 2.54e4
  • 2.56e4
  • 2.65e4
  • 2.69e4
  • 2.80e4
39.20
  • 39.20
  • 38.97
  • 38.76
  • 38.14
  • 36.14
  • 35.05
  • 32.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
2.52e4
  • 2.52e4
39.20
  • 39.20
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
2.61e4
  • 2.61e4
36.88
  • 36.88
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.67e4
  • 2.67e4
35.46
  • 35.46
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.73e4
  • 2.73e4
34.08
  • 34.08
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.74e4
  • 2.74e4
33.89
  • 33.89
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.77e4
  • 2.77e4
33.01
  • 33.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
2.95e4
  • 2.95e4
28.79
  • 28.79
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.07e4
  • 3.07e4
25.78
  • 25.78
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.08e4
  • 3.08e4
25.54
  • 25.54
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.10e4
  • 3.10e4
25.12
  • 25.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS19973 (CCDS19973.1), CCDS57417 (CCDS57417.1)
EMBLAC155848, AK006038, AK006332, CH466533
EnsemblENSMUSG00000029784 (Ssmem1)
MGIMGI:1922897 (Ssmem1)
Uniprot/SPTREMBLD3Z3E1, D3Z3E1_MOUSE, Q9D9Y8, Q9D9Y8_MOUSE, Q9DAA0, Q9DAA0_MOUSE

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