We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

M. musculus Gene: Slc6a12 - ENSMUSG00000030109 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000030109
NameSlc6a12
Descriptionsolute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 [Source:MGI Symbol;Acc:MGI:95628]
OrganismMus musculus (mouse)
Synonym(s)bgt1, gabt2, gat2
Orthologs(s)15 orthologs
Paralog(s)16 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002450decidua
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0007221neonate stage
255
  • 255
  • 423
  • 473
  • 575
  • 656
  • 917
  • 1.06e3
99.39
  • 99.39
  • 98.99
  • 98.87
  • 98.62
  • 98.43
  • 97.80
  • 97.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:00000539 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
1.35e3
  • 1.35e3
  • 2.74e3
  • 3.81e3
  • 4.39e3
  • 4.43e3
  • 5.09e3
  • 5.65e3
  • 5.77e3
  • 6.30e3
  • 6.33e3
  • 6.80e3
  • 9.41e3
  • 1.30e4
  • 1.45e4
96.76
  • 96.76
  • 93.42
  • 90.86
  • 89.48
  • 89.36
  • 87.78
  • 86.44
  • 86.17
  • 84.89
  • 84.81
  • 83.69
  • 77.42
  • 68.92
  • 65.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:000005410 weeks (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000539 weeks (mouse)
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:0000097late adult stage
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000776 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.50e3
  • 2.50e3
  • 2.79e3
  • 3.11e3
  • 3.28e3
  • 3.61e3
  • 4.24e3
  • 4.35e3
  • 4.46e3
  • 4.48e3
  • 4.51e3
  • 4.51e3
  • 4.64e3
  • 4.71e3
  • 4.81e3
  • 4.91e3
  • 5.31e3
  • 5.40e3
  • 5.40e3
  • 5.52e3
  • 5.54e3
  • 5.57e3
  • 5.68e3
  • 6.84e3
  • 7.52e3
  • 9.70e3
  • 1.09e4
  • 1.14e4
  • 1.34e4
  • 1.46e4
  • 2.25e4
94.00
  • 94.00
  • 93.30
  • 92.55
  • 92.14
  • 91.34
  • 89.83
  • 89.57
  • 89.30
  • 89.24
  • 89.18
  • 89.17
  • 88.86
  • 88.71
  • 88.46
  • 88.21
  • 87.26
  • 87.04
  • 87.04
  • 86.75
  • 86.70
  • 86.63
  • 86.37
  • 83.58
  • 81.96
  • 76.73
  • 73.84
  • 72.71
  • 67.80
  • 64.87
  • 45.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000112sexually immature stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
2.77e3
  • 2.77e3
  • 2.85e3
  • 8.55e3
  • 1.18e4
  • 1.61e4
  • 1.68e4
  • 1.73e4
  • 1.97e4
  • 2.27e4
  • 2.52e4
93.36
  • 93.36
  • 93.17
  • 79.49
  • 71.78
  • 61.47
  • 59.77
  • 58.40
  • 52.72
  • 45.53
  • 39.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
3.95e3
  • 3.95e3
  • 1.53e4
  • 1.72e4
  • 2.15e4
  • 2.72e4
90.53
  • 90.53
  • 63.29
  • 58.82
  • 48.52
  • 34.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
4.32e3
  • 4.32e3
  • 2.17e4
  • 2.32e4
  • 2.46e4
  • 2.52e4
  • 2.52e4
89.65
  • 89.65
  • 47.99
  • 44.27
  • 40.95
  • 39.47
  • 39.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001115left lobe of liver
  • MmusDv:00000644 month-old stage (mouse)
5.58e3
  • 5.58e3
86.61
  • 86.61
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
5.62e3
  • 5.62e3
86.53
  • 86.53
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
5.81e3
  • 5.81e3
  • 2.50e4
  • 2.56e4
86.06
  • 86.06
  • 39.90
  • 38.63
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
5.92e3
  • 5.92e3
85.81
  • 85.81
AEIR
  • AEIR
UBERON:0002115jejunum
  • MmusDv:000005410 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.18e3
  • 6.18e3
  • 2.10e4
  • 2.50e4
85.17
  • 85.17
  • 49.51
  • 40.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
7.33e3
  • 7.33e3
82.41
  • 82.41
AEIR
  • AEIR
UBERON:0002360meninx
  • MmusDv:0000029Theiler stage 22 (mouse)
7.58e3
  • 7.58e3
81.82
  • 81.82
AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
7.68e3
  • 7.68e3
81.56
  • 81.56
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
9.02e3
  • 9.02e3
  • 2.37e4
  • 2.46e4
  • 2.52e4
  • 2.57e4
78.36
  • 78.36
  • 43.10
  • 41.03
  • 39.41
  • 38.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
9.79e3
  • 9.79e3
  • 1.20e4
  • 1.78e4
  • 1.84e4
  • 2.28e4
  • 2.37e4
  • 2.49e4
  • 2.50e4
76.50
  • 76.50
  • 71.27
  • 57.28
  • 55.75
  • 45.18
  • 43.03
  • 40.14
  • 39.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000941cranial nerve II
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000451 week (mouse)
1.02e4
  • 1.02e4
  • 1.16e4
75.41
  • 75.41
  • 72.13
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
74.83
  • 74.83
AEIR
  • AEIR
UBERON:0001775ciliary body
  • MmusDv:00000622 month-old stage (mouse)
1.12e4
  • 1.12e4
73.20
  • 73.20
AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.12e4
  • 1.12e4
  • 1.55e4
  • 1.64e4
  • 1.77e4
  • 2.17e4
  • 2.49e4
73.09
  • 73.09
  • 62.70
  • 60.71
  • 57.64
  • 47.81
  • 40.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
1.12e4
  • 1.12e4
73.01
  • 73.01
AEIR
  • AEIR
UBERON:0003946placenta labyrinth
  • MmusDv:0000034Theiler stage 25 (mouse)
1.14e4
  • 1.14e4
72.62
  • 72.62
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
1.16e4
  • 1.16e4
  • 1.66e4
72.28
  • 72.28
  • 60.12
AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.20e4
  • 1.20e4
  • 1.44e4
  • 1.51e4
  • 1.97e4
  • 2.80e4
  • 2.97e4
71.14
  • 71.14
  • 65.36
  • 63.70
  • 52.79
  • 32.89
  • 28.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
  • 1.40e4
70.72
  • 70.72
  • 66.45
AEIR
  • AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
70.70
  • 70.70
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.25e4
  • 1.25e4
69.90
  • 69.90
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
69.23
  • 69.23
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
67.83
  • 67.83
AEIR
  • AEIR
UBERON:0003547brain meninx
  • MmusDv:0000032Theiler stage 23 (mouse)
1.39e4
  • 1.39e4
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:000005410 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
  • 1.49e4
  • 1.52e4
  • 1.74e4
  • 1.86e4
  • 2.02e4
  • 2.05e4
  • 2.14e4
  • 2.24e4
  • 2.24e4
  • 2.35e4
  • 2.40e4
  • 2.41e4
  • 2.44e4
  • 2.50e4
  • 2.55e4
  • 2.56e4
66.54
  • 66.54
  • 64.37
  • 63.50
  • 58.25
  • 55.40
  • 51.44
  • 50.82
  • 48.54
  • 46.32
  • 46.18
  • 43.50
  • 42.39
  • 42.26
  • 41.50
  • 39.92
  • 38.81
  • 38.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001322sciatic nerve
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
1.41e4
  • 1.41e4
  • 1.58e4
66.23
  • 66.23
  • 62.17
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
66.21
  • 66.21
AEIR
  • AEIR
UBERON:0001665triceps surae
  • MmusDv:00000633 month-old stage (mouse)
1.43e4
  • 1.43e4
65.75
  • 65.75
AEIR
  • AEIR
UBERON:0001929supraoptic nucleus
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
  • 1.82e4
65.47
  • 65.47
  • 56.42
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.45e4
  • 1.45e4
  • 1.62e4
  • 1.79e4
65.27
  • 65.27
  • 61.06
  • 57.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.45e4
  • 1.45e4
  • 1.46e4
65.24
  • 65.24
  • 64.91
AEIR
  • AEIR
  • AEIR
UBERON:0001103diaphragm
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
1.45e4
  • 1.45e4
  • 2.31e4
  • 2.31e4
65.13
  • 65.13
  • 44.63
  • 44.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001004respiratory system
  • MmusDv:0000029Theiler stage 22 (mouse)
1.46e4
  • 1.46e4
64.99
  • 64.99
AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
64.96
  • 64.96
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000066fully formed stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
  • 1.70e4
  • 1.89e4
  • 2.01e4
  • 2.18e4
  • 2.34e4
  • 2.37e4
  • 2.50e4
64.42
  • 64.42
  • 59.23
  • 54.59
  • 51.67
  • 47.65
  • 43.97
  • 43.22
  • 40.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
1.50e4
  • 1.50e4
63.96
  • 63.96
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.51e4
  • 1.51e4
  • 1.69e4
  • 1.75e4
  • 1.93e4
63.72
  • 63.72
  • 59.35
  • 57.89
  • 53.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
1.51e4
  • 1.51e4
  • 1.73e4
  • 1.90e4
  • 1.96e4
  • 2.07e4
  • 2.59e4
63.66
  • 63.66
  • 58.43
  • 54.34
  • 53.01
  • 50.21
  • 37.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
63.34
  • 63.34
AEIR
  • AEIR
UBERON:0002370thymus
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.84e4
  • 2.04e4
  • 2.12e4
  • 2.51e4
  • 2.82e4
63.25
  • 63.25
  • 55.93
  • 50.97
  • 49.19
  • 39.70
  • 32.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
1.54e4
  • 1.54e4
  • 1.69e4
  • 1.70e4
  • 2.02e4
63.07
  • 63.07
  • 59.36
  • 59.24
  • 51.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.56e4
  • 1.56e4
  • 1.63e4
  • 2.17e4
  • 2.19e4
62.62
  • 62.62
  • 60.88
  • 48.02
  • 47.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001769iris
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
1.60e4
  • 1.60e4
  • 1.66e4
61.70
  • 61.70
  • 60.15
AEIR
  • AEIR
  • AEIR
UBERON:0001844cochlea
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:000005410 weeks (mouse)
  • MmusDv:00000539 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000097late adult stage
1.61e4
  • 1.61e4
  • 1.72e4
  • 1.83e4
  • 2.18e4
  • 2.57e4
61.40
  • 61.40
  • 58.72
  • 56.20
  • 47.61
  • 38.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.62e4
  • 1.62e4
  • 1.68e4
  • 1.88e4
61.24
  • 61.24
  • 59.80
  • 54.81
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.62e4
  • 1.62e4
61.09
  • 61.09
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
1.63e4
  • 1.63e4
  • 1.71e4
  • 1.86e4
  • 2.36e4
  • 2.47e4
  • 2.52e4
  • 2.55e4
60.80
  • 60.80
  • 58.94
  • 55.39
  • 43.41
  • 40.71
  • 39.62
  • 38.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
60.39
  • 60.39
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
59.93
  • 59.93
AEIR
  • AEIR
UBERON:0007021sexually immature organism
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
  • 2.55e4
59.91
  • 59.91
  • 38.90
AEIR
  • AEIR
  • AEIR
UBERON:0002151pontine nuclear group
  • MmusDv:0000061early adult stage
1.69e4
  • 1.69e4
59.53
  • 59.53
AEIR
  • AEIR
UBERON:0000081metanephros
  • UBERON:0000104life cycle
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
1.69e4
  • 1.69e4
  • 1.82e4
  • 2.41e4
59.41
  • 59.41
  • 56.43
  • 42.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
  • 1.88e4
58.50
  • 58.50
  • 54.85
AEIR
  • AEIR
  • AEIR
UBERON:0002197median eminence of neurohypophysis
  • MmusDv:0000061early adult stage
1.75e4
  • 1.75e4
58.13
  • 58.13
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.76e4
  • 1.76e4
  • 1.96e4
  • 2.10e4
  • 2.12e4
  • 2.20e4
  • 2.85e4
  • 2.94e4
57.70
  • 57.70
  • 53.08
  • 49.63
  • 49.05
  • 47.11
  • 31.54
  • 29.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • MmusDv:0000075middle aged stage (mouse)
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 2.47e4
57.65
  • 57.65
  • 40.84
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000066fully formed stage
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.77e4
  • 1.77e4
  • 2.00e4
  • 2.14e4
  • 2.19e4
  • 2.25e4
  • 2.34e4
  • 2.38e4
  • 2.39e4
  • 2.41e4
  • 2.43e4
  • 2.43e4
  • 2.48e4
  • 2.51e4
  • 2.99e4
57.58
  • 57.58
  • 52.12
  • 48.55
  • 47.56
  • 45.97
  • 43.75
  • 42.84
  • 42.75
  • 42.17
  • 41.70
  • 41.59
  • 40.40
  • 39.88
  • 28.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 1.79e4
  • 2.48e4
57.47
  • 57.47
  • 57.15
  • 40.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.77e4
  • 1.77e4
57.41
  • 57.41
AEIR
  • AEIR
UBERON:0000966retina
  • MmusDv:00000451 week (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:0000061early adult stage
1.78e4
  • 1.78e4
  • 1.91e4
  • 1.96e4
  • 2.00e4
  • 2.17e4
  • 2.31e4
57.22
  • 57.22
  • 54.19
  • 52.91
  • 51.92
  • 47.92
  • 44.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.79e4
  • 1.79e4
  • 1.99e4
  • 2.50e4
  • 2.82e4
57.02
  • 57.02
  • 52.16
  • 39.98
  • 32.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.81e4
  • 1.81e4
  • 1.98e4
  • 2.87e4
56.61
  • 56.61
  • 52.60
  • 31.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
  • 2.36e4
  • 2.52e4
  • 2.52e4
55.86
  • 55.86
  • 43.42
  • 39.61
  • 39.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
1.85e4
  • 1.85e4
55.70
  • 55.70
AEIR
  • AEIR
UBERON:0003499brain blood vessel
  • UBERON:0007221neonate stage
1.86e4
  • 1.86e4
55.43
  • 55.43
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.87e4
  • 1.87e4
55.05
  • 55.05
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
55.01
  • 55.01
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007221neonate stage
  • MmusDv:0000061early adult stage
1.91e4
  • 1.91e4
  • 2.52e4
54.22
  • 54.22
  • 39.48
AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.93e4
  • 1.93e4
  • 2.47e4
53.78
  • 53.78
  • 40.68
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000066fully formed stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000104life cycle
1.99e4
  • 1.99e4
  • 2.12e4
  • 2.31e4
  • 2.38e4
  • 2.92e4
52.17
  • 52.17
  • 49.14
  • 44.65
  • 42.81
  • 29.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.00e4
  • 2.00e4
51.94
  • 51.94
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
2.01e4
  • 2.01e4
51.85
  • 51.85
AEIR
  • AEIR
UBERON:0002108small intestine
  • MmusDv:0000061early adult stage
  • UBERON:0007221neonate stage
  • MmusDv:00000622 month-old stage (mouse)
2.06e4
  • 2.06e4
  • 2.47e4
  • 2.59e4
50.68
  • 50.68
  • 40.62
  • 37.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.06e4
  • 2.06e4
  • 2.50e4
50.55
  • 50.55
  • 40.03
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:00000462 weeks (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000066fully formed stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
2.08e4
  • 2.08e4
  • 2.14e4
  • 2.15e4
  • 2.21e4
  • 2.48e4
  • 2.50e4
  • 2.53e4
  • 2.56e4
50.07
  • 50.07
  • 48.56
  • 48.43
  • 46.96
  • 40.56
  • 39.98
  • 39.17
  • 38.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
2.12e4
  • 2.12e4
  • 2.23e4
  • 2.24e4
  • 2.34e4
  • 2.34e4
  • 2.41e4
  • 2.51e4
  • 2.58e4
  • 2.61e4
  • 2.84e4
49.16
  • 49.16
  • 46.54
  • 46.15
  • 43.86
  • 43.76
  • 42.28
  • 39.67
  • 38.02
  • 37.27
  • 31.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.15e4
  • 2.15e4
  • 2.48e4
48.39
  • 48.39
  • 40.49
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.17e4
  • 2.17e4
47.86
  • 47.86
AEIR
  • AEIR
UBERON:0005147metanephric renal vesicle
  • MmusDv:0000027Theiler stage 20 (mouse)
2.25e4
  • 2.25e4
46.06
  • 46.06
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
2.28e4
  • 2.28e4
  • 2.32e4
  • 2.50e4
  • 3.09e4
45.20
  • 45.20
  • 44.29
  • 39.96
  • 25.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • MmusDv:0000075middle aged stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000097late adult stage
2.30e4
  • 2.30e4
  • 2.42e4
  • 2.48e4
44.85
  • 44.85
  • 41.83
  • 40.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004134proximal tubule
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
2.33e4
  • 2.33e4
  • 2.40e4
44.10
  • 44.10
  • 42.48
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.42e4
  • 2.42e4
  • 2.50e4
41.83
  • 41.83
  • 40.07
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • MmusDv:0000028Theiler stage 21 (mouse)
2.54e4
  • 2.54e4
39.06
  • 39.06
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.60e4
  • 2.60e4
37.64
  • 37.64
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
2.63e4
  • 2.63e4
36.84
  • 36.84
AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
2.64e4
  • 2.64e4
36.61
  • 36.61
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
2.73e4
  • 2.73e4
34.58
  • 34.58
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
2.81e4
  • 2.81e4
  • 2.94e4
  • 2.97e4
32.61
  • 32.61
  • 29.34
  • 28.81
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000030109.

Paralogs (same species)

Cross-references

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