M. musculus Gene: Praf2 - ENSMUSG00000031149 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000031149
NamePraf2
DescriptionPRA1 domain family 2 [Source:MGI Symbol;Acc:MGI:1859607]
OrganismMus musculus (mouse)
Synonym(s)aa986329, c78013, dximx39e, jm4, sfc20

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000112sexually immature stage
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000104life cycle
1.48e3
  • 1.48e3
  • 2.44e3
  • 3.42e3
  • 1.28e4
  • 1.64e4
  • 1.70e4
  • 1.98e4
96.43
  • 96.43
  • 94.11
  • 91.74
  • 69.03
  • 60.51
  • 58.95
  • 52.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.62e3
  • 1.62e3
  • 1.79e3
  • 1.99e3
  • 3.65e3
96.09
  • 96.09
  • 95.69
  • 95.20
  • 91.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
  • UBERON:0000112sexually immature stage
1.64e3
  • 1.64e3
  • 1.32e4
96.03
  • 96.03
  • 68.18
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.79e3
  • 1.79e3
95.69
  • 95.69
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.81e3
  • 1.81e3
95.62
  • 95.62
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
1.91e3
  • 1.91e3
95.40
  • 95.40
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.98e3
  • 1.98e3
95.21
  • 95.21
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000113post-juvenile adult stage
2.22e3
  • 2.22e3
94.65
  • 94.65
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
2.34e3
  • 2.34e3
94.36
  • 94.36
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
2.34e3
  • 2.34e3
  • 3.24e3
  • 3.26e3
  • 3.80e3
94.35
  • 94.35
  • 92.17
  • 92.14
  • 90.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.54e3
  • 2.54e3
93.88
  • 93.88
AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
2.66e3
  • 2.66e3
  • 3.94e3
  • 4.48e3
  • 7.07e3
  • 7.08e3
  • 7.12e3
  • 7.20e3
  • 7.21e3
  • 8.03e3
  • 8.85e3
  • 1.44e4
93.58
  • 93.58
  • 90.50
  • 89.17
  • 82.93
  • 82.91
  • 82.81
  • 82.62
  • 82.58
  • 80.62
  • 78.63
  • 65.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
2.81e3
  • 2.81e3
93.21
  • 93.21
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.82e3
  • 2.82e3
  • 3.01e3
  • 3.28e3
93.20
  • 93.20
  • 92.74
  • 92.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000451 week (mouse)
2.89e3
  • 2.89e3
  • 1.93e4
93.02
  • 93.02
  • 53.30
AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000451 week (mouse)
2.89e3
  • 2.89e3
  • 3.22e3
  • 3.26e3
  • 3.38e3
  • 3.71e3
93.01
  • 93.01
  • 92.23
  • 92.13
  • 91.85
  • 91.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
2.93e3
  • 2.93e3
92.92
  • 92.92
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
3.38e3
  • 3.38e3
  • 5.07e3
91.84
  • 91.84
  • 87.75
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
3.76e3
  • 3.76e3
  • 3.77e3
  • 1.64e4
90.92
  • 90.92
  • 90.91
  • 60.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
3.93e3
  • 3.93e3
90.52
  • 90.52
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
3.99e3
  • 3.99e3
90.36
  • 90.36
AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
4.26e3
  • 4.26e3
89.71
  • 89.71
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
4.50e3
  • 4.50e3
89.13
  • 89.13
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000104life cycle
4.87e3
  • 4.87e3
  • 8.00e3
  • 9.67e3
  • 1.02e4
  • 1.12e4
  • 1.65e4
  • 2.07e4
88.24
  • 88.24
  • 80.69
  • 76.65
  • 75.47
  • 72.99
  • 60.27
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
4.89e3
  • 4.89e3
88.19
  • 88.19
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
5.15e3
  • 5.15e3
  • 8.75e3
  • 9.47e3
87.58
  • 87.58
  • 78.87
  • 77.14
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
5.53e3
  • 5.53e3
86.64
  • 86.64
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
5.64e3
  • 5.64e3
86.39
  • 86.39
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
5.75e3
  • 5.75e3
86.11
  • 86.11
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
6.25e3
  • 6.25e3
  • 8.33e3
  • 8.79e3
  • 8.91e3
84.90
  • 84.90
  • 79.88
  • 78.79
  • 78.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.38e3
  • 6.38e3
84.61
  • 84.61
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.44e3
  • 6.44e3
84.45
  • 84.45
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.53e3
  • 6.53e3
84.23
  • 84.23
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.66e3
  • 6.66e3
83.92
  • 83.92
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • MmusDv:00000633 month-old stage (mouse)
6.73e3
  • 6.73e3
83.75
  • 83.75
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.86e3
  • 6.86e3
83.45
  • 83.45
AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000484 weeks (mouse)
6.98e3
  • 6.98e3
  • 8.62e3
  • 2.07e4
83.15
  • 83.15
  • 79.19
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
7.19e3
  • 7.19e3
82.64
  • 82.64
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000112sexually immature stage
  • MmusDv:00000451 week (mouse)
7.25e3
  • 7.25e3
  • 2.07e4
82.50
  • 82.50
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.38e3
  • 7.38e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
7.98e3
  • 7.98e3
  • 9.80e3
80.73
  • 80.73
  • 76.35
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000695 month-old stage (mouse)
8.05e3
  • 8.05e3
  • 1.18e4
  • 1.28e4
  • 1.67e4
80.57
  • 80.57
  • 71.41
  • 68.98
  • 59.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000484 weeks (mouse)
8.12e3
  • 8.12e3
  • 8.18e3
  • 1.71e4
  • 2.02e4
80.41
  • 80.41
  • 80.25
  • 58.66
  • 51.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
8.52e3
  • 8.52e3
  • 8.85e3
79.44
  • 79.44
  • 78.63
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000104life cycle
8.61e3
  • 8.61e3
  • 1.72e4
  • 1.90e4
79.21
  • 79.21
  • 58.50
  • 54.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000025Theiler stage 18 (mouse)
  • UBERON:0000068embryo stage
  • MmusDv:0000008Theiler stage 04 (mouse)
  • UBERON:0000108blastula stage
8.64e3
  • 8.64e3
  • 1.52e4
  • 1.61e4
  • 1.69e4
  • 1.77e4
  • 1.91e4
  • 2.01e4
  • 2.07e4
79.15
  • 79.15
  • 63.31
  • 61.17
  • 59.27
  • 57.28
  • 53.98
  • 51.56
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
8.65e3
  • 8.65e3
79.12
  • 79.12
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
9.02e3
  • 9.02e3
78.23
  • 78.23
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
9.04e3
  • 9.04e3
78.18
  • 78.18
AEIR
  • AEIR
UBERON:0001488ankle joint
  • UBERON:0000113post-juvenile adult stage
9.14e3
  • 9.14e3
77.93
  • 77.93
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
9.19e3
  • 9.19e3
77.82
  • 77.82
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
9.63e3
  • 9.63e3
76.75
  • 76.75
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
74.46
  • 74.46
AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
1.09e4
  • 1.09e4
73.64
  • 73.64
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.29e4
  • 1.29e4
68.78
  • 68.78
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
  • 2.18e4
  • 2.32e4
62.95
  • 62.95
  • 47.39
  • 44.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006377remnant of Rathke's pouch
  • MmusDv:0000029Theiler stage 22 (mouse)
1.65e4
  • 1.65e4
60.09
  • 60.09
AEIR
  • AEIR
UBERON:0000044dorsal root ganglion
  • MmusDv:0000032Theiler stage 23 (mouse)
1.66e4
  • 1.66e4
59.96
  • 59.96
AEIR
  • AEIR
MA:0000187neocortex region (mouse)
  • UBERON:0000104life cycle
1.98e4
  • 1.98e4
52.17
  • 52.17
AEIR
  • AEIR
UBERON:0001008renal system
  • UBERON:0000068embryo stage
2.07e4
  • 2.07e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000029lymph node
  • MmusDv:00000484 weeks (mouse)
2.07e4
  • 2.07e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0001894diencephalon
  • MmusDv:00000462 weeks (mouse)
2.07e4
  • 2.07e4
49.98
  • 49.98
AEIR
  • AEIR
UBERON:0009953post-embryonic organism
  • UBERON:0000104life cycle
  • UBERON:0007221neonate stage
2.07e4
  • 2.07e4
  • 2.07e4
49.98
  • 49.98
  • 49.96
AEIR
  • AEIR
  • AEIR
UBERON:0000165mouth
  • UBERON:0000068embryo stage
2.07e4
  • 2.07e4
49.97
  • 49.97
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.24e4
  • 2.24e4
45.95
  • 45.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS29971 (CCDS29971.1)
EMBLAF229636, AK003344, BC064757
EnsemblENSMUSG00000031149 (Praf2)
MGIMGI:1859607 (Praf2)
Uniprot/SWISSPROTPRAF2_MOUSE, Q9JIG8

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