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M. musculus Gene: Tceal6 - ENSMUSG00000031409 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000031409
NameTceal6
Descriptiontranscription elongation factor A (SII)-like 6 [Source:MGI Symbol;Acc:MGI:1923939]
OrganismMus musculus (mouse)
Synonym(s)1500026b10rik
Orthologs(s)28 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
  • MmusDv:00000451 week (mouse)
679
  • 679
  • 1.87e3
  • 1.93e3
  • 2.62e3
  • 3.54e3
  • 1.54e4
  • 1.99e4
  • 2.08e4
98.37
  • 98.37
  • 95.52
  • 95.38
  • 93.71
  • 91.51
  • 63.15
  • 52.28
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.08e3
  • 1.08e3
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
1.41e3
  • 1.41e3
  • 1.42e3
  • 2.58e3
  • 2.68e3
  • 1.28e4
  • 2.00e4
96.63
  • 96.63
  • 96.60
  • 93.81
  • 93.58
  • 69.30
  • 51.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
  • UBERON:0000112sexually immature stage
1.50e3
  • 1.50e3
  • 8.34e3
96.40
  • 96.40
  • 80.00
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.57e3
  • 1.57e3
96.24
  • 96.24
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.81e3
  • 1.81e3
95.65
  • 95.65
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.37e3
  • 2.37e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
2.57e3
  • 2.57e3
  • 3.67e3
  • 4.38e3
  • 7.25e3
93.83
  • 93.83
  • 91.19
  • 89.50
  • 82.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
  • UBERON:0000112sexually immature stage
2.76e3
  • 2.76e3
  • 7.58e3
93.37
  • 93.37
  • 81.82
AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
3.01e3
  • 3.01e3
92.77
  • 92.77
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
3.06e3
  • 3.06e3
92.65
  • 92.65
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
3.77e3
  • 3.77e3
90.95
  • 90.95
AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
4.26e3
  • 4.26e3
  • 7.13e3
  • 1.67e4
89.79
  • 89.79
  • 82.88
  • 60.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
4.44e3
  • 4.44e3
  • 4.63e3
  • 6.31e3
  • 1.26e4
  • 1.51e4
  • 1.61e4
89.35
  • 89.35
  • 88.89
  • 84.87
  • 69.71
  • 63.69
  • 61.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
4.55e3
  • 4.55e3
  • 4.98e3
  • 7.28e3
  • 1.10e4
  • 1.37e4
  • 1.49e4
89.08
  • 89.08
  • 88.04
  • 82.54
  • 73.53
  • 67.16
  • 64.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003599tail connective tissue
  • MmusDv:0000032Theiler stage 23 (mouse)
5.21e3
  • 5.21e3
87.50
  • 87.50
AEIR
  • AEIR
UBERON:0002103hindlimb
  • MmusDv:0000032Theiler stage 23 (mouse)
5.69e3
  • 5.69e3
86.36
  • 86.36
AEIR
  • AEIR
EMAPA:17743vertebral axis musculature (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
5.84e3
  • 5.84e3
85.99
  • 85.99
AEIR
  • AEIR
UBERON:0001723tongue
  • MmusDv:0000032Theiler stage 23 (mouse)
7.25e3
  • 7.25e3
82.60
  • 82.60
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
7.50e3
  • 7.50e3
  • 7.64e3
  • 8.96e3
  • 9.60e3
  • 1.41e4
  • 2.13e4
82.00
  • 82.00
  • 81.67
  • 78.49
  • 76.97
  • 66.21
  • 48.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
8.86e3
  • 8.86e3
78.75
  • 78.75
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
9.47e3
  • 9.47e3
  • 9.81e3
  • 1.55e4
  • 1.58e4
77.27
  • 77.27
  • 76.47
  • 62.81
  • 61.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
9.55e3
  • 9.55e3
77.09
  • 77.09
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
9.94e3
  • 9.94e3
  • 1.05e4
  • 1.67e4
  • 1.68e4
76.15
  • 76.15
  • 74.74
  • 60.03
  • 59.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
1.02e4
  • 1.02e4
75.42
  • 75.42
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
1.03e4
  • 1.03e4
75.36
  • 75.36
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
1.07e4
  • 1.07e4
  • 1.42e4
  • 2.50e4
74.34
  • 74.34
  • 65.81
  • 40.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.08e4
  • 1.08e4
  • 1.21e4
  • 1.44e4
74.11
  • 74.11
  • 71.04
  • 65.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002102forelimb
  • MmusDv:0000032Theiler stage 23 (mouse)
1.11e4
  • 1.11e4
73.33
  • 73.33
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
73.25
  • 73.25
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
1.12e4
  • 1.12e4
  • 1.20e4
  • 1.28e4
  • 1.39e4
  • 1.42e4
73.13
  • 73.13
  • 71.21
  • 69.23
  • 66.63
  • 66.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.13e4
  • 1.13e4
73.00
  • 73.00
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
  • 1.35e4
  • 1.52e4
  • 1.52e4
  • 1.65e4
  • 2.11e4
  • 2.60e4
  • 2.87e4
68.17
  • 68.17
  • 67.59
  • 63.63
  • 63.63
  • 60.44
  • 49.40
  • 37.50
  • 31.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.36e4
  • 1.36e4
  • 1.63e4
  • 2.47e4
67.39
  • 67.39
  • 60.92
  • 40.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
  • 2.87e4
67.26
  • 67.26
  • 31.23
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.38e4
  • 1.38e4
  • 1.47e4
  • 1.76e4
  • 1.86e4
66.97
  • 66.97
  • 64.61
  • 57.74
  • 55.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
1.45e4
  • 1.45e4
  • 1.68e4
65.14
  • 65.14
  • 59.67
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.48e4
  • 1.48e4
  • 1.66e4
  • 1.89e4
  • 2.19e4
  • 2.90e4
64.47
  • 64.47
  • 60.23
  • 54.76
  • 47.47
  • 30.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
63.48
  • 63.48
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
63.30
  • 63.30
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.56e4
  • 1.56e4
  • 1.65e4
  • 1.68e4
62.54
  • 62.54
  • 60.48
  • 59.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
61.55
  • 61.55
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.62e4
  • 1.62e4
  • 1.98e4
  • 2.03e4
  • 2.54e4
61.24
  • 61.24
  • 52.59
  • 51.25
  • 39.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • MmusDv:0000029Theiler stage 22 (mouse)
1.65e4
  • 1.65e4
60.34
  • 60.34
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
60.17
  • 60.17
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
  • 1.97e4
59.24
  • 59.24
  • 52.62
AEIR
  • AEIR
  • AEIR
MA:0000187neocortex region (mouse)
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
58.55
  • 58.55
AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
1.73e4
  • 1.73e4
58.44
  • 58.44
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
57.84
  • 57.84
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.78e4
  • 1.78e4
  • 1.98e4
57.30
  • 57.30
  • 52.53
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.00e4
  • 2.00e4
52.01
  • 52.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
  • 2.13e4
  • 2.45e4
50.29
  • 50.29
  • 48.87
  • 41.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
2.14e4
  • 2.14e4
  • 3.44e4
48.59
  • 48.59
  • 17.38
AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
45.92
  • 45.92
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.28e4
  • 2.28e4
45.25
  • 45.25
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
2.43e4
  • 2.43e4
  • 2.54e4
41.80
  • 41.80
  • 39.09
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
2.56e4
  • 2.56e4
  • 2.63e4
  • 2.75e4
38.66
  • 38.66
  • 36.98
  • 33.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
2.66e4
  • 2.66e4
36.14
  • 36.14
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.89e4
  • 2.89e4
30.71
  • 30.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species4 genesCompare expression
Glires3 species6 genesCompare expression
Euarchontoglires6 species14 genesCompare expression
Boreoeutheria11 species28 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000031409.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Murinae1 geneCompare expression
Rodentia2 genesCompare expression

Paralogy information comes from OMA : ENSMUSG00000031409.

Cross-references

CCDSCCDS30402 (CCDS30402.1)
EnsemblENSMUSG00000031409 (Tceal6)
MGIMGI:1923939 (Tceal6)
EMBLAK005297, AL731676, BC087890
Uniprot/SPTREMBLQ9DB24, Q9DB24_MOUSE

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