M. musculus Gene: Slc12a3 - ENSMUSG00000031766 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000031766
NameSlc12a3
Descriptionsolute carrier family 12, member 3 [Source:MGI Symbol;Acc:MGI:108114]
OrganismMus musculus (mouse)
Synonym(s)ai035291, ncc, ncct, tsc
Orthologs(s)17 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:0000035Theiler stage 26 (mouse)
348
  • 348
  • 1.50e3
  • 1.04e4
  • 1.39e4
99.17
  • 99.17
  • 96.41
  • 75.00
  • 66.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • MmusDv:0000097late adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000506 weeks (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:00000517 weeks (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
541
  • 541
  • 588
  • 745
  • 856
  • 884
  • 978
  • 1.04e3
  • 1.12e3
  • 1.36e3
  • 1.50e3
  • 1.73e3
  • 1.76e3
  • 2.30e3
  • 1.65e4
  • 2.09e4
98.70
  • 98.70
  • 98.59
  • 98.21
  • 97.95
  • 97.88
  • 97.65
  • 97.51
  • 97.32
  • 96.73
  • 96.41
  • 95.84
  • 95.78
  • 94.49
  • 60.43
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000081metanephros
  • UBERON:0000104life cycle
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000112sexually immature stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
748
  • 748
  • 1.14e3
  • 2.49e3
  • 9.26e3
  • 1.04e4
  • 1.91e4
98.21
  • 98.21
  • 97.27
  • 94.03
  • 77.78
  • 75.00
  • 54.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004134proximal tubule
  • UBERON:0000104life cycle
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
756
  • 756
  • 1.04e4
  • 1.59e4
98.19
  • 98.19
  • 75.00
  • 61.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
809
  • 809
  • 2.42e3
  • 1.07e4
  • 1.36e4
98.06
  • 98.06
  • 94.20
  • 74.21
  • 67.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
941
  • 941
97.74
  • 97.74
AEIR
  • AEIR
UBERON:0002371bone marrow
  • MmusDv:00000517 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
3.63e3
  • 3.63e3
  • 1.05e4
  • 1.54e4
  • 1.66e4
  • 1.69e4
  • 1.70e4
91.29
  • 91.29
  • 74.83
  • 62.94
  • 60.15
  • 59.45
  • 59.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004135distal tubule
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000112sexually immature stage
6.95e3
  • 6.95e3
  • 8.34e3
83.33
  • 83.33
  • 80.00
AEIR
  • AEIR
  • AEIR
UBERON:0006853renal cortex tubule
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000112sexually immature stage
6.95e3
  • 6.95e3
  • 1.04e4
83.33
  • 83.33
  • 75.00
AEIR
  • AEIR
  • AEIR
EMAPA:28527late tubule (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
8.34e3
  • 8.34e3
  • 2.08e4
80.00
  • 80.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 2.14e4
72.29
  • 72.29
  • 48.73
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
1.40e4
  • 1.40e4
66.33
  • 66.33
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
65.81
  • 65.81
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
  • 1.94e4
  • 2.15e4
58.97
  • 58.97
  • 53.50
  • 48.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003608hindlimb long bone
  • MmusDv:00000451 week (mouse)
1.72e4
  • 1.72e4
58.80
  • 58.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.72e4
  • 1.72e4
  • 1.77e4
  • 1.78e4
  • 1.81e4
  • 1.84e4
  • 1.87e4
  • 1.90e4
  • 1.97e4
  • 2.05e4
  • 2.10e4
  • 2.15e4
  • 2.40e4
58.76
  • 58.76
  • 57.57
  • 57.19
  • 56.49
  • 55.84
  • 55.06
  • 54.29
  • 52.74
  • 50.73
  • 49.64
  • 48.44
  • 42.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001844cochlea
  • MmusDv:00000451 week (mouse)
1.75e4
  • 1.75e4
57.94
  • 57.94
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
57.64
  • 57.64
AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
1.77e4
  • 1.77e4
  • 1.82e4
  • 1.93e4
  • 1.94e4
  • 2.01e4
  • 2.05e4
  • 2.35e4
  • 2.51e4
  • 2.59e4
57.50
  • 57.50
  • 56.27
  • 53.81
  • 53.40
  • 51.66
  • 50.78
  • 43.51
  • 39.69
  • 37.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • MmusDv:00000473 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
  • 2.28e4
56.22
  • 56.22
  • 45.37
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
55.43
  • 55.43
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
1.87e4
  • 1.87e4
  • 1.91e4
  • 2.06e4
  • 2.50e4
  • 2.56e4
55.14
  • 55.14
  • 54.26
  • 50.52
  • 40.11
  • 38.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.93e4
  • 1.93e4
53.75
  • 53.75
AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
  • 2.14e4
  • 2.20e4
  • 2.38e4
  • 2.40e4
  • 2.41e4
  • 2.51e4
  • 2.61e4
53.69
  • 53.69
  • 48.73
  • 47.25
  • 42.99
  • 42.48
  • 42.20
  • 39.86
  • 37.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
1.93e4
  • 1.93e4
  • 2.28e4
  • 2.38e4
  • 2.41e4
  • 2.50e4
53.63
  • 53.63
  • 45.26
  • 42.94
  • 42.12
  • 39.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000462 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000506 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
1.94e4
  • 1.94e4
  • 2.12e4
  • 2.15e4
  • 2.16e4
  • 2.19e4
  • 2.20e4
  • 2.22e4
  • 2.35e4
  • 2.40e4
  • 2.41e4
  • 2.44e4
  • 2.53e4
  • 2.56e4
53.48
  • 53.48
  • 49.04
  • 48.35
  • 48.06
  • 47.39
  • 47.09
  • 46.63
  • 43.66
  • 42.39
  • 42.28
  • 41.55
  • 39.37
  • 38.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:00000633 month-old stage (mouse)
1.96e4
  • 1.96e4
53.06
  • 53.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
  • 2.05e4
  • 2.17e4
  • 2.25e4
  • 2.50e4
  • 2.69e4
52.19
  • 52.19
  • 50.79
  • 47.83
  • 45.99
  • 40.08
  • 35.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
2.00e4
  • 2.00e4
  • 2.01e4
  • 2.10e4
  • 2.16e4
52.01
  • 52.01
  • 51.72
  • 49.72
  • 48.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
  • 2.83e4
51.49
  • 51.49
  • 31.99
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
  • 2.07e4
  • 2.45e4
  • 2.52e4
  • 2.65e4
  • 2.66e4
51.06
  • 51.06
  • 50.41
  • 41.30
  • 39.49
  • 36.29
  • 36.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.04e4
  • 2.04e4
  • 2.38e4
50.93
  • 50.93
  • 42.89
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:00000622 month-old stage (mouse)
2.05e4
  • 2.05e4
50.83
  • 50.83
AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000113post-juvenile adult stage
2.05e4
  • 2.05e4
50.83
  • 50.83
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.05e4
  • 2.05e4
50.76
  • 50.76
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.06e4
  • 2.06e4
50.64
  • 50.64
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:00000528 weeks (mouse)
2.12e4
  • 2.12e4
49.14
  • 49.14
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
2.14e4
  • 2.14e4
48.74
  • 48.74
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.14e4
  • 2.14e4
48.73
  • 48.73
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.17e4
  • 2.17e4
  • 2.41e4
47.92
  • 47.92
  • 42.21
AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
  • 2.32e4
  • 2.52e4
  • 2.90e4
46.82
  • 46.82
  • 44.34
  • 39.62
  • 30.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
2.23e4
  • 2.23e4
46.41
  • 46.41
AEIR
  • AEIR
UBERON:0000059large intestine
  • MmusDv:00000622 month-old stage (mouse)
2.24e4
  • 2.24e4
46.32
  • 46.32
AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.25e4
  • 2.25e4
  • 2.39e4
  • 2.53e4
46.12
  • 46.12
  • 42.57
  • 39.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
2.27e4
  • 2.27e4
45.62
  • 45.62
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.40e4
  • 2.40e4
42.47
  • 42.47
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.42e4
  • 2.42e4
  • 2.50e4
41.83
  • 41.83
  • 40.07
AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.50e4
  • 2.50e4
  • 2.51e4
40.03
  • 40.03
  • 39.84
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.53e4
  • 2.53e4
39.31
  • 39.31
AEIR
  • AEIR
UBERON:0006862diaphysis of femur
  • MmusDv:00000495 weeks (mouse)
2.53e4
  • 2.53e4
39.21
  • 39.21
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
2.55e4
  • 2.55e4
38.75
  • 38.75
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000035Theiler stage 26 (mouse)
2.61e4
  • 2.61e4
37.40
  • 37.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
  • MmusDv:0000076aged adult stage (mouse)
2.61e4
  • 2.61e4
  • 2.91e4
37.40
  • 37.40
  • 30.18
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.68e4
  • 2.68e4
35.81
  • 35.81
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
2.84e4
  • 2.84e4
31.92
  • 31.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000031766.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Metazoa2 genesCompare expression
Eukaryota8 genesCompare expression

Paralogy information comes from OMA : ENSMUSG00000031766.

Cross-references

CCDSCCDS57632 (CCDS57632.1)
EnsemblENSMUSG00000031766 (Slc12a3)
MGIMGI:108114 (Slc12a3)
EMBLAC128663, AK052691, BC038612
Uniprot/SPTREMBLQ543E4, Q543E4_MOUSE
Uniprot/SWISSPROTP59158, S12A3_MOUSE

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