M. musculus Gene: Nr2e3 - ENSMUSG00000032292 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000032292
NameNr2e3
Descriptionnuclear receptor subfamily 2, group E, member 3 [Source:MGI Symbol;Acc:MGI:1346317]
OrganismMus musculus (mouse)
Synonym(s)a930035n01rik, photoreceptor-specific nuclear receptor, pnr, rd7, rnr

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
176
  • 176
99.57699
  • 99.57699
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000451 week (mouse)
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000495 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000473 weeks (mouse)
231
  • 231
  • 253
  • 278
  • 284
  • 486
  • 514
  • 921
  • 5.74e3
  • 7.10e3
  • 8.75e3
99.44370
  • 99.44370
  • 99.39172
  • 99.33020
  • 99.31755
  • 98.82856
  • 98.76147
  • 97.77926
  • 86.14136
  • 82.84918
  • 78.88281
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0007221neonate stage
481
  • 481
  • 2.76e3
  • 2.84e3
  • 3.57e3
  • 1.03e4
  • 1.23e4
  • 1.85e4
98.84177
  • 98.84177
  • 93.34809
  • 93.14679
  • 91.39546
  • 75.05505
  • 70.41173
  • 55.33153
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
1.18e3
  • 1.18e3
  • 3.06e3
  • 1.25e4
  • 1.51e4
97.16130
  • 97.16130
  • 92.62352
  • 69.87038
  • 63.54529
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
2.22e3
  • 2.22e3
  • 8.99e3
  • 1.03e4
  • 2.36e4
  • 2.58e4
94.64512
  • 94.64512
  • 78.30198
  • 75.19389
  • 43.09099
  • 37.66869
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001782pigmented layer of retina
  • MmusDv:00000622 month-old stage (mouse)
4.12e3
  • 4.12e3
90.05548
  • 90.05548
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
4.27e3
  • 4.27e3
  • 2.49e4
  • 2.89e4
89.69725
  • 89.69725
  • 39.88682
  • 30.22093
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
6.77e3
  • 6.77e3
  • 2.13e4
83.65765
  • 83.65765
  • 48.69203
AEIR
  • AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • UBERON:0000112sexually immature stage
  • UBERON:0007221neonate stage
6.91e3
  • 6.91e3
  • 1.15e4
83.32851
  • 83.32851
  • 72.21859
AEIR
  • AEIR
  • AEIR
UBERON:0001803epithelium of lens
  • MmusDv:00000473 weeks (mouse)
7.94e3
  • 7.94e3
80.84162
  • 80.84162
AEIR
  • AEIR
UBERON:0002116ileum
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000113post-juvenile adult stage
8.05e3
  • 8.05e3
  • 8.08e3
  • 1.83e4
80.56873
  • 80.56873
  • 80.49141
  • 55.72673
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
8.80e3
  • 8.80e3
78.74672
  • 78.74672
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
  • MmusDv:00000473 weeks (mouse)
9.28e3
  • 9.28e3
  • 1.69e4
77.60618
  • 77.60618
  • 59.21944
AEIR
  • AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000473 weeks (mouse)
9.78e3
  • 9.78e3
  • 1.14e4
  • 1.31e4
  • 1.31e4
  • 1.96e4
76.37953
  • 76.37953
  • 72.50394
  • 68.42487
  • 68.39539
  • 52.58503
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.15e4
  • 1.15e4
  • 2.07e4
72.21859
  • 72.21859
  • 49.99638
AEIR
  • AEIR
  • AEIR
UBERON:0001902epithelium of small intestine
  • MmusDv:0000035Theiler stage 26 (mouse)
1.19e4
  • 1.19e4
71.19833
  • 71.19833
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000517 weeks (mouse)
1.23e4
  • 1.23e4
  • 2.25e4
70.21236
  • 70.21236
  • 45.76395
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000517 weeks (mouse)
1.33e4
  • 1.33e4
  • 1.91e4
  • 2.13e4
  • 2.28e4
  • 2.32e4
67.97137
  • 67.97137
  • 53.90215
  • 48.57127
  • 44.99626
  • 44.03580
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000964cornea
  • UBERON:0000104life cycle
  • MmusDv:00000451 week (mouse)
1.36e4
  • 1.36e4
  • 1.82e4
67.11417
  • 67.11417
  • 56.16118
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 2.57e4
66.98928
  • 66.98928
  • 37.97612
AEIR
  • AEIR
  • AEIR
CL:0002607migratory enteric neural crest cell
  • MmusDv:0000029Theiler stage 22 (mouse)
1.44e4
  • 1.44e4
65.27030
  • 65.27030
AEIR
  • AEIR
UBERON:0001769iris
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
1.48e4
  • 1.48e4
  • 1.82e4
64.28380
  • 64.28380
  • 56.17371
AEIR
  • AEIR
  • AEIR
UBERON:0000998seminal vesicle
  • MmusDv:0000061early adult stage
1.48e4
  • 1.48e4
64.19903
  • 64.19903
AEIR
  • AEIR
UBERON:0000991gonad
  • MmusDv:0000029Theiler stage 22 (mouse)
1.55e4
  • 1.55e4
62.49155
  • 62.49155
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.56e4
  • 1.56e4
  • 1.79e4
  • 2.05e4
62.37137
  • 62.37137
  • 56.67385
  • 50.45756
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002416integumental system
  • MmusDv:0000029Theiler stage 22 (mouse)
1.59e4
  • 1.59e4
61.52880
  • 61.52880
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.60e4
  • 1.60e4
  • 1.71e4
61.40789
  • 61.40789
  • 58.62557
AEIR
  • AEIR
  • AEIR
UBERON:0001016nervous system
  • MmusDv:0000029Theiler stage 22 (mouse)
1.69e4
  • 1.69e4
59.08245
  • 59.08245
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.70e4
  • 1.70e4
  • 1.93e4
  • 2.10e4
58.94481
  • 58.94481
  • 53.50212
  • 49.29655
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • MmusDv:0000032Theiler stage 23 (mouse)
1.74e4
  • 1.74e4
57.92668
  • 57.92668
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000104life cycle
1.87e4
  • 1.87e4
  • 1.99e4
  • 2.49e4
54.87487
  • 54.87487
  • 51.87506
  • 39.90324
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004347limb bud
  • MmusDv:0000027Theiler stage 20 (mouse)
1.90e4
  • 1.90e4
54.22460
  • 54.22460
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.92e4
  • 1.92e4
  • 2.46e4
53.71318
  • 53.71318
  • 40.56704
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.93e4
  • 1.93e4
  • 2.44e4
  • 2.50e4
  • 2.56e4
53.40898
  • 53.40898
  • 41.18363
  • 39.54177
  • 38.12139
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
1.97e4
  • 1.97e4
52.44568
  • 52.44568
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000076aged adult stage (mouse)
2.11e4
  • 2.11e4
  • 3.59e4
48.94556
  • 48.94556
  • 13.21528
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
2.14e4
  • 2.14e4
48.44783
  • 48.44783
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000097late adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
2.19e4
  • 2.19e4
  • 2.44e4
  • 2.46e4
  • 2.50e4
  • 2.57e4
  • 2.66e4
47.20558
  • 47.20558
  • 41.04268
  • 40.54954
  • 39.59061
  • 37.85374
  • 35.88341
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
2.19e4
  • 2.19e4
  • 2.37e4
  • 2.51e4
  • 2.52e4
  • 2.53e4
  • 2.72e4
  • 2.89e4
47.02670
  • 47.02670
  • 42.69925
  • 39.47827
  • 39.20174
  • 38.97125
  • 34.44387
  • 30.22347
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0007221neonate stage
2.22e4
  • 2.22e4
  • 2.29e4
  • 2.42e4
  • 2.47e4
  • 2.48e4
46.42014
  • 46.42014
  • 44.71552
  • 41.58588
  • 40.25587
  • 40.23609
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.23e4
  • 2.23e4
  • 2.46e4
46.17479
  • 46.17479
  • 40.63493
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.25e4
  • 2.25e4
  • 2.32e4
  • 2.44e4
  • 2.49e4
  • 2.50e4
  • 2.55e4
  • 3.10e4
45.69447
  • 45.69447
  • 44.07310
  • 41.05966
  • 39.93749
  • 39.75234
  • 38.47859
  • 25.24925
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.28e4
  • 2.28e4
  • 2.42e4
44.99877
  • 44.99877
  • 41.53981
AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
2.35e4
  • 2.35e4
  • 2.50e4
  • 2.51e4
  • 2.54e4
  • 2.60e4
43.30022
  • 43.30022
  • 39.63530
  • 39.50867
  • 38.73788
  • 37.19218
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.36e4
  • 2.36e4
  • 2.43e4
43.07525
  • 43.07525
  • 41.27294
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
2.40e4
  • 2.40e4
  • 2.41e4
  • 2.43e4
  • 2.44e4
  • 2.55e4
  • 2.59e4
  • 2.89e4
42.17706
  • 42.17706
  • 41.77607
  • 41.37979
  • 41.18667
  • 38.51941
  • 37.49078
  • 30.18716
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0007221neonate stage
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
2.40e4
  • 2.40e4
  • 2.49e4
  • 2.66e4
  • 2.88e4
41.93996
  • 41.93996
  • 39.92576
  • 35.80307
  • 30.51306
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:00072381st arch maxillary component
  • MmusDv:0000024Theiler stage 17 (mouse)
2.45e4
  • 2.45e4
40.94406
  • 40.94406
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
2.45e4
  • 2.45e4
  • 2.51e4
  • 2.52e4
  • 2.54e4
  • 2.55e4
40.92337
  • 40.92337
  • 39.29783
  • 39.10396
  • 38.73766
  • 38.39722
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0000104life cycle
2.46e4
  • 2.46e4
40.72670
  • 40.72670
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
2.48e4
  • 2.48e4
40.02776
  • 40.02776
AEIR
  • AEIR
UBERON:0001844cochlea
  • MmusDv:00000539 weeks (mouse)
2.50e4
  • 2.50e4
39.55285
  • 39.55285
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:00000633 month-old stage (mouse)
2.52e4
  • 2.52e4
39.22274
  • 39.22274
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.64e4
  • 2.64e4
36.26207
  • 36.26207
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
2.67e4
  • 2.67e4
35.54384
  • 35.54384
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.70e4
  • 2.70e4
34.71383
  • 34.71383
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.98e4
  • 2.98e4
27.98865
  • 27.98865
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.99e4
  • 2.99e4
27.89672
  • 27.89672
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.07e4
  • 3.07e4
25.90254
  • 25.90254
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.08e4
  • 3.08e4
25.62301
  • 25.62301
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
3.20e4
  • 3.20e4
22.80147
  • 22.80147
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS23255 (CCDS23255.1)
EMBLAC131749, AF148129, AF204053, AK053560, BC017521, CH466522
EnsemblENSMUSG00000032292 (Nr2e3)
MGIMGI:1346317 (Nr2e3)
Uniprot/SPTREMBLQ543C7, Q543C7_MOUSE
Uniprot/SWISSPROTNR2E3_MOUSE, Q9QXZ7

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