M. musculus Gene: Cdhr2 - ENSMUSG00000034918 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000034918
NameCdhr2
Descriptioncadherin-related family member 2 [Source:MGI Symbol;Acc:MGI:2687323]
OrganismMus musculus (mouse)
Synonym(s)gm624, loc268663, pc-lkc, pcdh24

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
37.2
  • 37.2
  • 306
  • 1.89e4
99.91268
  • 99.91268
  • 99.26253
  • 54.41079
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000035Theiler stage 26 (mouse)
106
  • 106
  • 169
  • 353
  • 612
  • 9.61e3
99.74732
  • 99.74732
  • 99.59476
  • 99.15046
  • 98.52523
  • 76.79013
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000076aged adult stage (mouse)
116
  • 116
  • 317
  • 322
99.72298
  • 99.72298
  • 99.23641
  • 99.22511
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
204
  • 204
  • 267
  • 294
  • 323
  • 445
99.50985
  • 99.50985
  • 99.35765
  • 99.29225
  • 99.22327
  • 98.92834
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • MmusDv:00000517 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
212
  • 212
  • 289
99.49138
  • 99.49138
  • 99.30553
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000539 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
413
  • 413
  • 533
  • 611
  • 837
  • 842
  • 842
99.00418
  • 99.00418
  • 98.71622
  • 98.52789
  • 97.98059
  • 97.97035
  • 97.96871
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001902epithelium of small intestine
  • MmusDv:0000035Theiler stage 26 (mouse)
585
  • 585
98.59066
  • 98.59066
AEIR
  • AEIR
UBERON:0008971left colon
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
724
  • 724
  • 1.10e3
98.25442
  • 98.25442
  • 97.34580
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
853
  • 853
  • 860
97.94281
  • 97.94281
  • 97.92721
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.97e3
  • 1.97e3
  • 7.92e3
  • 1.22e4
95.25459
  • 95.25459
  • 80.87583
  • 70.65191
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
2.39e3
  • 2.39e3
  • 1.08e4
94.22366
  • 94.22366
  • 73.83230
AEIR
  • AEIR
  • AEIR
CL:0000510paneth cell
  • MmusDv:00000506 weeks (mouse)
3.05e3
  • 3.05e3
92.63648
  • 92.63648
AEIR
  • AEIR
UBERON:0005151metanephric proximal tubule
  • MmusDv:0000032Theiler stage 23 (mouse)
4.11e3
  • 4.11e3
90.06808
  • 90.06808
AEIR
  • AEIR
UBERON:0007021sexually immature organism
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
4.54e3
  • 4.54e3
  • 2.54e4
89.04882
  • 89.04882
  • 38.78259
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • MmusDv:0000097late adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000112sexually immature stage
5.35e3
  • 5.35e3
  • 6.22e3
  • 6.59e3
  • 7.09e3
  • 7.36e3
  • 8.88e3
  • 9.11e3
  • 9.39e3
  • 9.55e3
87.08580
  • 87.08580
  • 84.98315
  • 84.09150
  • 82.88648
  • 82.22178
  • 78.56927
  • 78.00635
  • 77.33288
  • 76.93868
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002607migratory enteric neural crest cell
  • MmusDv:0000029Theiler stage 22 (mouse)
8.16e3
  • 8.16e3
80.30645
  • 80.30645
AEIR
  • AEIR
UBERON:0000081metanephros
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
8.35e3
  • 8.35e3
  • 1.08e4
  • 1.10e4
  • 2.20e4
79.84198
  • 79.84198
  • 73.97950
  • 73.42455
  • 46.85715
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:00000506 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
8.79e3
  • 8.79e3
  • 8.84e3
  • 9.18e3
  • 1.12e4
  • 1.13e4
  • 1.25e4
  • 1.25e4
  • 1.26e4
  • 1.32e4
  • 1.40e4
  • 1.81e4
  • 1.88e4
  • 2.12e4
  • 2.26e4
  • 2.34e4
  • 2.42e4
78.77409
  • 78.77409
  • 78.66741
  • 77.82866
  • 72.99884
  • 72.60625
  • 69.93416
  • 69.80505
  • 69.62373
  • 68.10299
  • 66.27339
  • 56.42414
  • 54.50205
  • 48.79491
  • 45.41878
  • 43.45297
  • 41.53737
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • UBERON:0000110neurula stage
1.03e4
  • 1.03e4
75.08851
  • 75.08851
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000035Theiler stage 26 (mouse)
1.08e4
  • 1.08e4
  • 2.37e4
73.89722
  • 73.89722
  • 42.73964
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000110neurula stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.25e4
  • 1.25e4
  • 1.28e4
  • 1.59e4
  • 2.02e4
  • 2.14e4
  • 2.39e4
  • 2.48e4
  • 2.49e4
  • 2.51e4
69.83477
  • 69.83477
  • 68.99536
  • 61.58064
  • 51.29551
  • 48.40869
  • 42.32547
  • 40.23489
  • 40.00447
  • 39.29783
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • MmusDv:0000020Theiler stage 13 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000539 weeks (mouse)
  • UBERON:0000068embryo stage
  • MmusDv:0000024Theiler stage 17 (mouse)
1.31e4
  • 1.31e4
  • 1.35e4
  • 1.46e4
  • 1.50e4
  • 1.64e4
  • 2.39e4
68.40295
  • 68.40295
  • 67.43225
  • 64.77129
  • 63.88230
  • 60.49230
  • 42.42055
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
1.41e4
  • 1.41e4
  • 1.81e4
  • 1.98e4
  • 2.44e4
66.02122
  • 66.02122
  • 56.31265
  • 52.24406
  • 41.05430
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
1.46e4
  • 1.46e4
  • 2.56e4
  • 2.57e4
  • 2.58e4
  • 2.61e4
  • 2.81e4
64.83887
  • 64.83887
  • 38.11871
  • 37.88032
  • 37.64319
  • 37.10432
  • 32.18303
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004341primitive streak
  • UBERON:0000068embryo stage
1.48e4
  • 1.48e4
64.16398
  • 64.16398
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.58e4
  • 1.58e4
61.78397
  • 61.78397
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
1.75e4
  • 1.75e4
  • 1.96e4
  • 2.50e4
  • 2.95e4
57.64961
  • 57.64961
  • 52.63858
  • 39.59232
  • 28.73040
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.76e4
  • 1.76e4
57.46096
  • 57.46096
AEIR
  • AEIR
UBERON:0006946efferent duct
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
1.76e4
  • 1.76e4
  • 1.91e4
57.41417
  • 57.41417
  • 53.85715
AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • MmusDv:0000029Theiler stage 22 (mouse)
1.77e4
  • 1.77e4
57.19162
  • 57.19162
AEIR
  • AEIR
UBERON:0009953post-embryonic organism
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
57.12354
  • 57.12354
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
56.76002
  • 56.76002
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.82e4
  • 1.82e4
56.10480
  • 56.10480
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.89e4
  • 1.89e4
  • 1.90e4
  • 2.15e4
  • 2.18e4
  • 2.33e4
  • 2.41e4
  • 2.45e4
  • 2.49e4
  • 2.55e4
  • 2.57e4
54.42999
  • 54.42999
  • 54.09264
  • 48.04918
  • 47.32255
  • 43.83559
  • 41.70980
  • 40.74312
  • 39.83834
  • 38.52255
  • 37.98322
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.94e4
  • 1.94e4
53.09324
  • 53.09324
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
1.95e4
  • 1.95e4
52.91036
  • 52.91036
AEIR
  • AEIR
UBERON:0000323late embryo
  • UBERON:0007220late embryonic stage
1.99e4
  • 1.99e4
52.04097
  • 52.04097
AEIR
  • AEIR
UBERON:0001276epithelium of stomach
  • UBERON:0000104life cycle
2.00e4
  • 2.00e4
51.60017
  • 51.60017
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.02e4
  • 2.02e4
51.26048
  • 51.26048
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
2.05e4
  • 2.05e4
50.54372
  • 50.54372
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000068embryo stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000104life cycle
2.10e4
  • 2.10e4
  • 2.42e4
  • 2.48e4
  • 2.49e4
  • 2.49e4
  • 2.50e4
  • 2.54e4
  • 2.55e4
  • 2.55e4
  • 2.57e4
  • 2.78e4
49.20787
  • 49.20787
  • 41.46548
  • 40.20937
  • 39.83448
  • 39.80879
  • 39.75234
  • 38.57327
  • 38.47859
  • 38.46480
  • 38.07523
  • 32.91569
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000035Theiler stage 26 (mouse)
2.11e4
  • 2.11e4
49.15845
  • 49.15845
AEIR
  • AEIR
UBERON:0002167right lung
  • MmusDv:00000633 month-old stage (mouse)
2.11e4
  • 2.11e4
49.09068
  • 49.09068
AEIR
  • AEIR
UBERON:0000056ureter
  • MmusDv:0000032Theiler stage 23 (mouse)
2.12e4
  • 2.12e4
48.78986
  • 48.78986
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
2.14e4
  • 2.14e4
  • 2.20e4
  • 2.26e4
  • 2.30e4
  • 2.39e4
  • 2.49e4
  • 2.53e4
48.43293
  • 48.43293
  • 46.89196
  • 45.51004
  • 44.49829
  • 42.32549
  • 39.92240
  • 38.97125
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.15e4
  • 2.15e4
48.20010
  • 48.20010
AEIR
  • AEIR
UBERON:0005148metanephric S-shaped body
  • MmusDv:0000032Theiler stage 23 (mouse)
2.15e4
  • 2.15e4
48.19725
  • 48.19725
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
2.15e4
  • 2.15e4
48.10444
  • 48.10444
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
2.17e4
  • 2.17e4
  • 2.43e4
47.63392
  • 47.63392
  • 41.41181
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • MmusDv:0000061early adult stage
2.18e4
  • 2.18e4
47.30352
  • 47.30352
AEIR
  • AEIR
UBERON:0005294gonadal ridge
  • MmusDv:0000034Theiler stage 25 (mouse)
2.19e4
  • 2.19e4
47.08653
  • 47.08653
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.21e4
  • 2.21e4
  • 2.69e4
  • 2.94e4
46.55633
  • 46.55633
  • 35.05249
  • 29.02943
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
2.25e4
  • 2.25e4
  • 2.93e4
45.74720
  • 45.74720
  • 29.26972
AEIR
  • AEIR
  • AEIR
UBERON:0005211renal medulla interstitium
  • MmusDv:0000032Theiler stage 23 (mouse)
2.25e4
  • 2.25e4
45.56540
  • 45.56540
AEIR
  • AEIR
UBERON:0005147metanephric renal vesicle
  • MmusDv:0000027Theiler stage 20 (mouse)
2.26e4
  • 2.26e4
45.47103
  • 45.47103
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.26e4
  • 2.26e4
45.45299
  • 45.45299
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.34e4
  • 2.34e4
43.61695
  • 43.61695
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.34e4
  • 2.34e4
43.48904
  • 43.48904
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000462 weeks (mouse)
2.35e4
  • 2.35e4
  • 2.48e4
  • 2.51e4
43.15024
  • 43.15024
  • 40.02776
  • 39.40164
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.41e4
  • 2.41e4
  • 2.50e4
  • 2.56e4
  • 2.57e4
  • 3.10e4
41.70828
  • 41.70828
  • 39.59061
  • 38.19293
  • 37.85374
  • 25.17767
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000029Theiler stage 22 (mouse)
2.47e4
  • 2.47e4
40.29517
  • 40.29517
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
2.63e4
  • 2.63e4
36.48880
  • 36.48880
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

CCDSCCDS36669 (CCDS36669.1)
EMBLAC162526
EnsemblENSMUSG00000034918 (Cdhr2)
MGIMGI:2687323 (Cdhr2)
Uniprot/SPTREMBLCDHR2_MOUSE, E9Q7P9

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