M. musculus Gene: Col10a1 - ENSMUSG00000039462 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000039462
NameCol10a1
Descriptioncollagen, type X, alpha 1 [Source:MGI Symbol;Acc:MGI:88445]
OrganismMus musculus (mouse)
Synonym(s)col10, col10a-1
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
920
  • 920
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0000976humerus
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
993
  • 993
  • 1.39e4
  • 1.39e4
  • 1.39e4
97.62
  • 97.62
  • 66.67
  • 66.67
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000979tibia
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
1.39e3
  • 1.39e3
  • 4.17e3
  • 5.21e3
  • 5.21e3
  • 5.21e3
  • 1.04e4
96.67
  • 96.67
  • 90.00
  • 87.50
  • 87.50
  • 87.50
  • 75.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010849tibia cartilage element
  • MmusDv:0000029Theiler stage 22 (mouse)
2.98e3
  • 2.98e3
92.86
  • 92.86
AEIR
  • AEIR
UBERON:0002102forelimb
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
3.29e3
  • 3.29e3
  • 1.04e4
92.11
  • 92.11
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:0010129femur cartilage element
  • MmusDv:0000029Theiler stage 22 (mouse)
3.47e3
  • 3.47e3
91.67
  • 91.67
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000106zygote stage
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
5.17e3
  • 5.17e3
  • 7.15e3
  • 1.38e4
  • 1.85e4
  • 2.16e4
  • 2.16e4
  • 2.40e4
  • 2.46e4
  • 2.52e4
  • 2.53e4
  • 2.57e4
87.60
  • 87.60
  • 82.84
  • 66.83
  • 55.60
  • 48.18
  • 48.18
  • 42.31
  • 41.03
  • 39.41
  • 39.22
  • 38.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000981femur
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000112sexually immature stage
  • UBERON:0007221neonate stage
5.21e3
  • 5.21e3
  • 1.08e4
  • 2.08e4
  • 2.08e4
87.50
  • 87.50
  • 74.18
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006245humerus cartilage element
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
5.21e3
  • 5.21e3
  • 2.15e4
87.50
  • 87.50
  • 48.33
AEIR
  • AEIR
  • AEIR
UBERON:0006772long bone epiphyseal plate hypertrophic zone
  • UBERON:0000112sexually immature stage
5.21e3
  • 5.21e3
87.50
  • 87.50
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
5.21e3
  • 5.21e3
  • 9.26e3
  • 1.04e4
  • 1.38e4
  • 2.08e4
  • 2.15e4
87.50
  • 87.50
  • 77.78
  • 75.00
  • 66.98
  • 50.08
  • 48.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000323late embryo
  • UBERON:0007220late embryonic stage
6.81e3
  • 6.81e3
83.66
  • 83.66
AEIR
  • AEIR
UBERON:0001424ulna
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
6.95e3
  • 6.95e3
  • 1.39e4
83.33
  • 83.33
  • 66.67
AEIR
  • AEIR
  • AEIR
UBERON:0001725cranial synchondrosis
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
6.95e3
  • 6.95e3
  • 2.08e4
83.33
  • 83.33
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001844cochlea
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00000539 weeks (mouse)
7.48e3
  • 7.48e3
  • 8.21e3
  • 1.07e4
  • 1.96e4
  • 2.51e4
82.05
  • 82.05
  • 80.31
  • 74.27
  • 53.05
  • 39.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
7.51e3
  • 7.51e3
  • 2.05e4
  • 2.15e4
  • 2.72e4
81.98
  • 81.98
  • 50.73
  • 48.52
  • 34.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002228rib
  • MmusDv:0000032Theiler stage 23 (mouse)
7.62e3
  • 7.62e3
81.71
  • 81.71
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
7.67e3
  • 7.67e3
81.60
  • 81.60
AEIR
  • AEIR
UBERON:0006849scapula
  • MmusDv:0000032Theiler stage 23 (mouse)
7.82e3
  • 7.82e3
81.25
  • 81.25
AEIR
  • AEIR
UBERON:0004339vault of skull
  • UBERON:0000104life cycle
9.25e3
  • 9.25e3
77.82
  • 77.82
AEIR
  • AEIR
UBERON:0004454tarsal region
  • MmusDv:00000506 weeks (mouse)
9.48e3
  • 9.48e3
77.24
  • 77.24
AEIR
  • AEIR
UBERON:0001446fibula
  • MmusDv:0000032Theiler stage 23 (mouse)
9.62e3
  • 9.62e3
76.92
  • 76.92
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000695 month-old stage (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000097late adult stage
1.00e4
  • 1.00e4
  • 1.03e4
  • 2.10e4
  • 2.24e4
  • 2.33e4
  • 2.38e4
  • 2.52e4
  • 2.56e4
76.00
  • 76.00
  • 75.38
  • 49.60
  • 46.25
  • 44.16
  • 43.00
  • 39.48
  • 38.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001423radius bone
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
1.04e4
  • 1.04e4
  • 1.79e4
  • 2.08e4
  • 2.08e4
75.00
  • 75.00
  • 57.14
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002389manual digit
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.04e4
  • 1.04e4
  • 1.39e4
75.00
  • 75.00
  • 66.67
AEIR
  • AEIR
  • AEIR
UBERON:0010884forelimb bone pre-cartilage condensation
  • MmusDv:0000032Theiler stage 23 (mouse)
1.04e4
  • 1.04e4
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • MmusDv:0000032Theiler stage 23 (mouse)
1.16e4
  • 1.16e4
72.22
  • 72.22
AEIR
  • AEIR
UBERON:0001684mandible
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.25e4
  • 1.25e4
  • 2.08e4
  • 2.09e4
70.00
  • 70.00
  • 50.00
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006246humerus pre-cartilage condensation
  • MmusDv:0000027Theiler stage 20 (mouse)
1.25e4
  • 1.25e4
70.00
  • 70.00
AEIR
  • AEIR
UBERON:0006286radius cartilage element
  • MmusDv:0000029Theiler stage 22 (mouse)
1.25e4
  • 1.25e4
70.00
  • 70.00
AEIR
  • AEIR
UBERON:0006306ulna cartilage element
  • MmusDv:0000029Theiler stage 22 (mouse)
1.25e4
  • 1.25e4
70.00
  • 70.00
AEIR
  • AEIR
UBERON:0001105clavicle bone
  • MmusDv:0000032Theiler stage 23 (mouse)
1.25e4
  • 1.25e4
69.98
  • 69.98
AEIR
  • AEIR
UBERON:0003608hindlimb long bone
  • MmusDv:00000451 week (mouse)
1.30e4
  • 1.30e4
68.90
  • 68.90
AEIR
  • AEIR
UBERON:0006288rib cartilage element
  • MmusDv:0000029Theiler stage 22 (mouse)
1.30e4
  • 1.30e4
68.75
  • 68.75
AEIR
  • AEIR
UBERON:0001466pedal digit
  • MmusDv:0000034Theiler stage 25 (mouse)
1.39e4
  • 1.39e4
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0002398manus
  • MmusDv:0000033Theiler stage 24 (mouse)
1.39e4
  • 1.39e4
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0003107Meckel's cartilage
  • MmusDv:0000035Theiler stage 26 (mouse)
1.39e4
  • 1.39e4
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0009879tarsal skeleton
  • MmusDv:0000034Theiler stage 25 (mouse)
1.39e4
  • 1.39e4
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0001459skin of external ear
  • MmusDv:0000061early adult stage
1.40e4
  • 1.40e4
66.32
  • 66.32
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
  • 1.61e4
  • 1.89e4
  • 2.56e4
  • 2.58e4
  • 2.59e4
65.84
  • 65.84
  • 61.43
  • 54.54
  • 38.66
  • 38.16
  • 37.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000032Theiler stage 23 (mouse)
1.44e4
  • 1.44e4
65.36
  • 65.36
AEIR
  • AEIR
UBERON:0001678temporal bone
  • MmusDv:0000032Theiler stage 23 (mouse)
1.45e4
  • 1.45e4
65.20
  • 65.20
AEIR
  • AEIR
UBERON:0000947aorta
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000097late adult stage
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
  • 1.72e4
  • 2.37e4
  • 2.51e4
64.18
  • 64.18
  • 58.74
  • 43.13
  • 39.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.51e4
  • 1.51e4
  • 2.15e4
  • 2.50e4
  • 2.58e4
63.72
  • 63.72
  • 48.39
  • 39.99
  • 37.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
63.67
  • 63.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007221neonate stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
1.53e4
  • 1.53e4
  • 1.94e4
  • 2.10e4
  • 2.11e4
  • 2.15e4
  • 2.19e4
  • 2.28e4
  • 2.30e4
  • 2.34e4
  • 2.36e4
  • 2.40e4
  • 2.48e4
  • 2.66e4
  • 2.77e4
63.34
  • 63.34
  • 53.38
  • 49.66
  • 49.34
  • 48.43
  • 47.43
  • 45.27
  • 44.80
  • 43.81
  • 43.30
  • 42.48
  • 40.53
  • 36.21
  • 33.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001692basioccipital bone
  • MmusDv:0000032Theiler stage 23 (mouse)
1.55e4
  • 1.55e4
62.83
  • 62.83
AEIR
  • AEIR
UBERON:0002397maxilla
  • MmusDv:0000029Theiler stage 22 (mouse)
1.56e4
  • 1.56e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0010686manual digit phalanx cartilage element
  • MmusDv:0000029Theiler stage 22 (mouse)
1.56e4
  • 1.56e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0001496ascending aorta
  • MmusDv:00000484 weeks (mouse)
1.58e4
  • 1.58e4
62.13
  • 62.13
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
61.18
  • 61.18
AEIR
  • AEIR
UBERON:0002137aortic valve
  • MmusDv:00000484 weeks (mouse)
1.63e4
  • 1.63e4
60.86
  • 60.86
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.65e4
  • 1.65e4
60.43
  • 60.43
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
1.66e4
  • 1.66e4
  • 1.90e4
  • 2.25e4
  • 2.68e4
60.27
  • 60.27
  • 54.37
  • 45.94
  • 35.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001497muscle of pelvic girdle
  • MmusDv:0000032Theiler stage 23 (mouse)
1.67e4
  • 1.67e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.67e4
  • 1.67e4
  • 2.41e4
  • 2.51e4
  • 2.57e4
  • 2.57e4
59.99
  • 59.99
  • 42.26
  • 39.65
  • 38.36
  • 38.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
1.71e4
  • 1.71e4
  • 1.93e4
59.08
  • 59.08
  • 53.64
AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
1.77e4
  • 1.77e4
  • 2.14e4
  • 2.34e4
  • 2.36e4
  • 2.50e4
  • 2.51e4
  • 2.52e4
  • 2.55e4
57.63
  • 57.63
  • 48.73
  • 43.77
  • 43.41
  • 39.97
  • 39.75
  • 39.62
  • 38.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 1.96e4
  • 2.23e4
  • 2.26e4
  • 2.53e4
  • 2.57e4
57.60
  • 57.60
  • 52.94
  • 46.55
  • 45.86
  • 39.23
  • 38.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 2.04e4
  • 2.23e4
  • 2.39e4
57.43
  • 57.43
  • 51.06
  • 46.47
  • 42.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001474bone element
  • MmusDv:00000622 month-old stage (mouse)
1.78e4
  • 1.78e4
57.30
  • 57.30
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0000104life cycle
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:00000484 weeks (mouse)
1.78e4
  • 1.78e4
  • 1.88e4
  • 2.30e4
57.24
  • 57.24
  • 54.87
  • 44.71
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
1.82e4
  • 1.82e4
56.27
  • 56.27
AEIR
  • AEIR
UBERON:0001690ear
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000068embryo stage
1.83e4
  • 1.83e4
  • 2.23e4
56.11
  • 56.11
  • 46.43
AEIR
  • AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.90e4
  • 1.90e4
54.42
  • 54.42
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
1.92e4
  • 1.92e4
  • 2.13e4
  • 2.32e4
  • 2.38e4
  • 2.39e4
  • 2.44e4
  • 2.46e4
  • 2.47e4
  • 2.51e4
53.87
  • 53.87
  • 48.90
  • 44.28
  • 42.81
  • 42.70
  • 41.55
  • 40.85
  • 40.82
  • 39.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.95e4
  • 1.95e4
  • 2.13e4
  • 2.21e4
  • 2.29e4
53.19
  • 53.19
  • 48.85
  • 46.98
  • 44.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
1.96e4
  • 1.96e4
  • 2.00e4
  • 2.25e4
  • 2.26e4
  • 2.51e4
52.86
  • 52.86
  • 52.11
  • 46.12
  • 45.80
  • 39.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.97e4
  • 1.97e4
  • 1.97e4
  • 2.29e4
  • 2.36e4
52.74
  • 52.74
  • 52.73
  • 44.96
  • 43.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.97e4
  • 1.97e4
  • 2.06e4
  • 2.23e4
  • 2.47e4
52.70
  • 52.70
  • 50.55
  • 46.45
  • 40.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.99e4
  • 1.99e4
52.23
  • 52.23
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000066fully formed stage
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
2.01e4
  • 2.01e4
  • 2.09e4
  • 2.15e4
  • 2.23e4
  • 2.23e4
  • 2.27e4
  • 2.32e4
  • 2.39e4
  • 2.43e4
  • 2.45e4
  • 2.49e4
  • 2.52e4
  • 2.55e4
51.74
  • 51.74
  • 49.73
  • 48.46
  • 46.57
  • 46.42
  • 45.64
  • 44.24
  • 42.59
  • 41.66
  • 41.22
  • 40.34
  • 39.64
  • 38.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
2.01e4
  • 2.01e4
51.66
  • 51.66
AEIR
  • AEIR
UBERON:0001885dentate gyrus of hippocampal formation
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
2.02e4
  • 2.02e4
  • 2.10e4
  • 2.45e4
51.60
  • 51.60
  • 49.67
  • 41.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
  • 2.08e4
  • 2.61e4
  • 2.79e4
51.35
  • 51.35
  • 50.00
  • 37.45
  • 32.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.03e4
  • 2.03e4
51.25
  • 51.25
AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
2.06e4
  • 2.06e4
  • 2.16e4
  • 2.34e4
  • 2.47e4
50.67
  • 50.67
  • 48.15
  • 43.76
  • 40.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
  • MmusDv:0000076aged adult stage (mouse)
2.06e4
  • 2.06e4
  • 2.83e4
50.66
  • 50.66
  • 32.02
AEIR
  • AEIR
  • AEIR
UBERON:0000411visual cortex
  • MmusDv:00000473 weeks (mouse)
2.07e4
  • 2.07e4
50.41
  • 50.41
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • MmusDv:00000473 weeks (mouse)
  • UBERON:0000104life cycle
2.07e4
  • 2.07e4
  • 2.59e4
50.23
  • 50.23
  • 37.81
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000695 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
2.08e4
  • 2.08e4
  • 2.12e4
  • 2.14e4
  • 2.30e4
  • 2.32e4
  • 2.46e4
  • 2.59e4
50.04
  • 50.04
  • 49.03
  • 48.62
  • 44.74
  • 44.44
  • 41.07
  • 37.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
EMAPA:32640forelimb digit cartilage condensation (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
2.08e4
  • 2.08e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001436phalanx of manus
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
2.08e4
  • 2.08e4
  • 2.08e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0003840hindlimb joint
  • UBERON:0000112sexually immature stage
2.08e4
  • 2.08e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001950neocortex
  • MmusDv:00000528 weeks (mouse)
2.12e4
  • 2.12e4
49.14
  • 49.14
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
2.12e4
  • 2.12e4
  • 2.22e4
  • 2.37e4
  • 2.45e4
49.14
  • 49.14
  • 46.64
  • 43.16
  • 41.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
2.12e4
  • 2.12e4
49.09
  • 49.09
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.14e4
  • 2.14e4
  • 2.45e4
  • 2.45e4
  • 2.48e4
  • 2.53e4
48.62
  • 48.62
  • 41.31
  • 41.11
  • 40.59
  • 39.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.15e4
  • 2.15e4
  • 2.44e4
  • 2.46e4
48.33
  • 48.33
  • 41.50
  • 41.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000776 month-old stage (mouse)
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000097late adult stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
2.22e4
  • 2.22e4
  • 2.24e4
  • 2.24e4
  • 2.26e4
  • 2.26e4
  • 2.29e4
  • 2.32e4
  • 2.34e4
  • 2.36e4
  • 2.39e4
  • 2.40e4
  • 2.43e4
  • 2.43e4
  • 2.49e4
  • 2.51e4
  • 2.91e4
46.85
  • 46.85
  • 46.26
  • 46.16
  • 45.82
  • 45.74
  • 45.10
  • 44.22
  • 43.75
  • 43.46
  • 42.59
  • 42.44
  • 41.74
  • 41.72
  • 40.37
  • 39.85
  • 30.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0007221neonate stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
  • 2.45e4
  • 2.47e4
  • 2.59e4
  • 2.62e4
  • 2.65e4
  • 2.85e4
46.77
  • 46.77
  • 41.31
  • 40.77
  • 37.82
  • 37.23
  • 36.41
  • 31.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
2.25e4
  • 2.25e4
  • 2.37e4
  • 2.62e4
46.10
  • 46.10
  • 43.13
  • 37.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • MmusDv:0000032Theiler stage 23 (mouse)
2.27e4
  • 2.27e4
  • 2.28e4
  • 2.30e4
  • 2.46e4
45.51
  • 45.51
  • 45.35
  • 44.71
  • 41.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007021sexually immature organism
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
2.31e4
  • 2.31e4
  • 2.55e4
44.63
  • 44.63
  • 38.90
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
2.31e4
  • 2.31e4
44.56
  • 44.56
AEIR
  • AEIR
UBERON:0006862diaphysis of femur
  • MmusDv:00000495 weeks (mouse)
2.31e4
  • 2.31e4
44.55
  • 44.55
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
44.11
  • 44.11
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
2.33e4
  • 2.33e4
  • 2.39e4
43.99
  • 43.99
  • 42.58
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.36e4
  • 2.36e4
43.45
  • 43.45
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000066fully formed stage
  • MmusDv:00000462 weeks (mouse)
  • UBERON:0000104life cycle
2.36e4
  • 2.36e4
  • 2.37e4
  • 2.49e4
43.38
  • 43.38
  • 43.13
  • 40.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004134proximal tubule
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
2.40e4
  • 2.40e4
  • 2.45e4
42.48
  • 42.48
  • 41.24
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.42e4
  • 2.42e4
  • 2.77e4
41.88
  • 41.88
  • 33.56
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
2.43e4
  • 2.43e4
  • 2.50e4
41.58
  • 41.58
  • 40.08
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.56e4
  • 2.56e4
38.61
  • 38.61
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.63e4
  • 2.63e4
36.81
  • 36.81
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
2.73e4
  • 2.73e4
34.44
  • 34.44
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000066fully formed stage
2.80e4
  • 2.80e4
32.79
  • 32.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000039462.

Cross-references

CCDSCCDS23780 (CCDS23780.1)
EnsemblENSMUSG00000039462 (Col10a1)
MGIMGI:88445 (Col10a1)
EMBLX63013, X65121, X67348, Z21610
Uniprot/SWISSPROTCOAA1_MOUSE, Q05306

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