M. musculus Gene: Cdh18 - ENSMUSG00000040420 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000040420
NameCdh18
Descriptioncadherin 18 [Source:MGI Symbol;Acc:MGI:1344366]
OrganismMus musculus (mouse)
Synonym(s)b230220e17rik, cdh14l

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
3.97e3
  • 3.97e3
  • 5.40e3
  • 6.26e3
90.42733
  • 90.42733
  • 86.95420
  • 84.89283
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
4.36e3
  • 4.36e3
89.47356
  • 89.47356
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000112sexually immature stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
4.71e3
  • 4.71e3
  • 1.00e4
  • 1.01e4
  • 1.04e4
88.63411
  • 88.63411
  • 75.75640
  • 75.55816
  • 74.89435
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
5.04e3
  • 5.04e3
87.82735
  • 87.82735
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
5.75e3
  • 5.75e3
86.10983
  • 86.10983
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000112sexually immature stage
6.59e3
  • 6.59e3
84.08795
  • 84.08795
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0000112sexually immature stage
6.91e3
  • 6.91e3
83.32972
  • 83.32972
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
7.01e3
  • 7.01e3
  • 1.22e4
83.08547
  • 83.08547
  • 70.57859
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000112sexually immature stage
7.25e3
  • 7.25e3
82.49691
  • 82.49691
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0000112sexually immature stage
7.40e3
  • 7.40e3
82.13923
  • 82.13923
AEIR
  • AEIR
UBERON:0002360meninx
  • UBERON:0000112sexually immature stage
7.53e3
  • 7.53e3
81.81577
  • 81.81577
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
8.05e3
  • 8.05e3
80.55669
  • 80.55669
AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0000112sexually immature stage
8.29e3
  • 8.29e3
79.99759
  • 79.99759
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
8.29e3
  • 8.29e3
  • 1.02e4
  • 3.09e4
79.98793
  • 79.98793
  • 75.45389
  • 25.42250
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000112sexually immature stage
8.53e3
  • 8.53e3
79.40572
  • 79.40572
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
8.67e3
  • 8.67e3
79.06120
  • 79.06120
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
8.75e3
  • 8.75e3
78.88037
  • 78.88037
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
8.82e3
  • 8.82e3
78.70278
  • 78.70278
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
8.94e3
  • 8.94e3
78.42214
  • 78.42214
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0000112sexually immature stage
1.04e4
  • 1.04e4
74.99276
  • 74.99276
AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
1.04e4
  • 1.04e4
74.79693
  • 74.79693
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.08e4
  • 1.08e4
73.97467
  • 73.97467
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
72.69676
  • 72.69676
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
1.13e4
  • 1.13e4
  • 1.80e4
72.67706
  • 72.67706
  • 56.56531
AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
1.24e4
  • 1.24e4
  • 1.31e4
  • 1.42e4
  • 1.49e4
  • 1.49e4
70.15449
  • 70.15449
  • 68.45002
  • 65.79305
  • 64.11596
  • 64.07791
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
1.29e4
  • 1.29e4
68.97393
  • 68.97393
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
1.46e4
  • 1.46e4
64.69949
  • 64.69949
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
  • 3.53e4
64.47610
  • 64.47610
  • 14.69063
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
1.51e4
  • 1.51e4
63.57854
  • 63.57854
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
62.63641
  • 62.63641
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.60e4
  • 1.60e4
  • 1.73e4
  • 1.77e4
  • 2.08e4
  • 2.40e4
61.35925
  • 61.35925
  • 58.25925
  • 57.23397
  • 49.77547
  • 42.01813
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
1.73e4
  • 1.73e4
  • 1.90e4
  • 2.12e4
58.13334
  • 58.13334
  • 54.13327
  • 48.79836
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • MmusDv:00000528 weeks (mouse)
1.75e4
  • 1.75e4
57.70642
  • 57.70642
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.84e4
  • 1.84e4
  • 1.85e4
  • 2.11e4
55.61743
  • 55.61743
  • 55.29507
  • 49.10193
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.85e4
  • 1.85e4
  • 1.95e4
  • 2.14e4
55.37709
  • 55.37709
  • 52.81869
  • 48.38815
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
1.87e4
  • 1.87e4
54.75857
  • 54.75857
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
2.11e4
  • 2.11e4
49.14775
  • 49.14775
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.26e4
  • 2.26e4
45.54145
  • 45.54145
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.43e4
  • 2.43e4
41.40915
  • 41.40915
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
2.47e4
  • 2.47e4
  • 2.54e4
40.37479
  • 40.37479
  • 38.73870
AEIR
  • AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.52e4
  • 2.52e4
39.18136
  • 39.18136
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.54e4
  • 2.54e4
38.58310
  • 38.58310
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.83e4
  • 2.83e4
31.78394
  • 31.78394
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
2.91e4
  • 2.91e4
  • 3.00e4
  • 3.55e4
29.64804
  • 29.64804
  • 27.45932
  • 14.36987
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.96e4
  • 2.96e4
28.46644
  • 28.46644
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.00e4
  • 3.00e4
27.66572
  • 27.66572
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
3.01e4
  • 3.01e4
27.42728
  • 27.42728
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.15e4
  • 3.15e4
24.01347
  • 24.01347
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Cross-references

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