M. musculus Gene: Nrl - ENSMUSG00000040632 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000040632
NameNrl
Descriptionneural retina leucine zipper gene [Source:MGI Symbol;Acc:MGI:102567]
OrganismMus musculus (mouse)
Synonym(s)d14h14s46e

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000473 weeks (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
21.7
  • 21.7
  • 24.4
  • 37.9
  • 38.5
  • 41.4
  • 1.20e3
  • 3.66e3
  • 4.50e3
  • 4.81e3
  • 5.67e3
  • 8.51e3
  • 1.10e4
  • 1.22e4
  • 1.25e4
99.94995
  • 99.94995
  • 99.94341
  • 99.91094
  • 99.90937
  • 99.90241
  • 97.11135
  • 91.16287
  • 89.14942
  • 88.39915
  • 86.30997
  • 79.44575
  • 73.52096
  • 70.53165
  • 69.82192
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
44.0
  • 44.0
99.89614
  • 99.89614
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0007221neonate stage
70.1
  • 70.1
  • 111
  • 163
  • 191
  • 2.83e3
  • 4.41e3
  • 1.92e4
99.83315
  • 99.83315
  • 99.73479
  • 99.60867
  • 99.54066
  • 93.16403
  • 89.36540
  • 53.54469
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001782pigmented layer of retina
  • MmusDv:00000622 month-old stage (mouse)
231
  • 231
99.44507
  • 99.44507
AEIR
  • AEIR
UBERON:0001803epithelium of lens
  • MmusDv:00000473 weeks (mouse)
1.43e3
  • 1.43e3
96.54365
  • 96.54365
AEIR
  • AEIR
UBERON:0001769iris
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
4.30e3
  • 4.30e3
  • 1.13e4
89.61762
  • 89.61762
  • 72.68914
AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000451 week (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
4.37e3
  • 4.37e3
  • 7.97e3
  • 1.22e4
  • 1.30e4
  • 1.78e4
89.45309
  • 89.45309
  • 80.75048
  • 70.50541
  • 68.62960
  • 57.01709
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001775ciliary body
  • MmusDv:00000622 month-old stage (mouse)
6.34e3
  • 6.34e3
84.70748
  • 84.70748
AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • UBERON:0000112sexually immature stage
  • UBERON:0007221neonate stage
9.21e3
  • 9.21e3
  • 1.15e4
77.77055
  • 77.77055
  • 72.21859
AEIR
  • AEIR
  • AEIR
UBERON:0000964cornea
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000451 week (mouse)
1.01e4
  • 1.01e4
  • 1.07e4
  • 1.49e4
75.72267
  • 75.72267
  • 74.28829
  • 63.99597
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000506 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000068embryo stage
1.18e4
  • 1.18e4
  • 2.06e4
  • 2.07e4
  • 2.19e4
  • 2.19e4
  • 2.23e4
  • 2.30e4
  • 2.31e4
  • 2.40e4
  • 2.43e4
  • 2.48e4
  • 2.49e4
  • 2.49e4
  • 2.50e4
  • 2.55e4
71.41306
  • 71.41306
  • 50.22694
  • 50.02871
  • 47.24780
  • 47.05464
  • 46.26692
  • 44.49466
  • 44.12496
  • 42.15270
  • 41.27504
  • 40.04112
  • 39.83448
  • 39.80879
  • 39.75234
  • 38.46480
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010307conjunctival fornix
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000451 week (mouse)
1.19e4
  • 1.19e4
  • 1.56e4
71.36323
  • 71.36323
  • 62.30070
AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000633 month-old stage (mouse)
1.52e4
  • 1.52e4
  • 1.93e4
  • 2.35e4
  • 2.50e4
  • 2.51e4
  • 2.54e4
63.41393
  • 63.41393
  • 53.29085
  • 43.20381
  • 39.63530
  • 39.51531
  • 38.73788
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.54e4
  • 1.54e4
  • 1.76e4
  • 2.41e4
62.91876
  • 62.91876
  • 57.49911
  • 41.72994
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.56e4
  • 1.56e4
62.24640
  • 62.24640
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.79e4
  • 1.79e4
  • 1.88e4
  • 1.89e4
  • 1.94e4
  • 2.01e4
  • 2.17e4
  • 2.33e4
  • 2.35e4
56.69411
  • 56.69411
  • 54.68052
  • 54.25179
  • 53.05413
  • 51.40410
  • 47.51869
  • 43.70623
  • 43.30521
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000462 weeks (mouse)
  • UBERON:0000104life cycle
1.85e4
  • 1.85e4
  • 2.29e4
  • 2.36e4
  • 2.48e4
55.29005
  • 55.29005
  • 44.66260
  • 43.02885
  • 40.02776
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.88e4
  • 1.88e4
54.64587
  • 54.64587
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
1.89e4
  • 1.89e4
  • 1.99e4
  • 2.44e4
54.28911
  • 54.28911
  • 52.07113
  • 41.19877
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.95e4
  • 1.95e4
52.86461
  • 52.86461
AEIR
  • AEIR
UBERON:0000127facial nucleus
  • MmusDv:00001134-7 days (mouse)
1.97e4
  • 1.97e4
52.41516
  • 52.41516
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
2.07e4
  • 2.07e4
  • 2.09e4
  • 2.43e4
  • 2.50e4
50.04000
  • 50.04000
  • 49.46427
  • 41.32832
  • 39.59232
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000029Theiler stage 22 (mouse)
2.11e4
  • 2.11e4
  • 2.46e4
  • 2.47e4
49.09235
  • 49.09235
  • 40.69754
  • 40.29517
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
2.20e4
  • 2.20e4
  • 2.20e4
46.90210
  • 46.90210
  • 46.87231
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
2.20e4
  • 2.20e4
  • 2.58e4
  • 2.68e4
46.79626
  • 46.79626
  • 37.82255
  • 35.29044
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.22e4
  • 2.22e4
46.48143
  • 46.48143
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
2.42e4
  • 2.42e4
  • 2.55e4
  • 2.58e4
  • 2.78e4
  • 3.02e4
41.67523
  • 41.67523
  • 38.41586
  • 37.64319
  • 32.80550
  • 27.12598
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002308nucleus of brain
  • MmusDv:0000061early adult stage
2.43e4
  • 2.43e4
41.27424
  • 41.27424
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.44e4
  • 2.44e4
  • 2.46e4
41.21248
  • 41.21248
  • 40.71393
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
2.47e4
  • 2.47e4
40.26753
  • 40.26753
AEIR
  • AEIR
UBERON:0002257ventral horn of spinal cord
  • UBERON:0000104life cycle
  • MmusDv:00001134-7 days (mouse)
2.54e4
  • 2.54e4
  • 2.55e4
38.75997
  • 38.75997
  • 38.49252
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • MmusDv:0000076aged adult stage (mouse)
2.54e4
  • 2.54e4
38.59208
  • 38.59208
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000029Theiler stage 22 (mouse)
2.58e4
  • 2.58e4
37.78204
  • 37.78204
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007221neonate stage
2.65e4
  • 2.65e4
36.12267
  • 36.12267
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.71e4
  • 2.71e4
34.61538
  • 34.61538
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
2.87e4
  • 2.87e4
30.60867
  • 30.60867
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
2.89e4
  • 2.89e4
30.14667
  • 30.14667
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS27113 (CCDS27113.1)
EMBLAC159002, AK044275, AK044316, BC031440, CH466535, L14935
EnsemblENSMUSG00000040632 (Nrl)
MGIMGI:102567 (Nrl)
Uniprot/SPTREMBLQ543Y0, Q543Y0_MOUSE
Uniprot/SWISSPROTNRL_MOUSE, P54846

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