M. musculus Gene: Nrl - ENSMUSG00000040632 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000040632
NameNrl
Descriptionneural retina leucine zipper gene [Source:MGI Symbol;Acc:MGI:102567]
OrganismMus musculus (mouse)
Synonym(s)d14h14s46e

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000451 week (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000473 weeks (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
21.6
  • 21.6
  • 24.3
  • 37.6
  • 38.2
  • 41.1
  • 1.19e3
  • 4.77e3
  • 5.08e3
  • 6.30e3
  • 7.72e3
  • 8.46e3
  • 1.09e4
  • 1.21e4
  • 1.24e4
99.94981
  • 99.94981
  • 99.94328
  • 99.91075
  • 99.90922
  • 99.90223
  • 97.10284
  • 88.38177
  • 87.61255
  • 84.65280
  • 81.17538
  • 79.38506
  • 73.52088
  • 70.48743
  • 69.77665
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0007221neonate stage
69.7
  • 69.7
  • 110
  • 162
  • 193
  • 2.81e3
  • 4.38e3
  • 1.91e4
99.83266
  • 99.83266
  • 99.73404
  • 99.60785
  • 99.53136
  • 93.14386
  • 89.33402
  • 53.54444
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001782pigmented layer of retina
  • MmusDv:00000622 month-old stage (mouse)
229
  • 229
99.44344
  • 99.44344
AEIR
  • AEIR
UBERON:0001803epithelium of lens
  • MmusDv:00000473 weeks (mouse)
1.42e3
  • 1.42e3
96.53346
  • 96.53346
AEIR
  • AEIR
UBERON:0001769iris
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
4.27e3
  • 4.27e3
  • 1.12e4
89.58698
  • 89.58698
  • 72.60851
AEIR
  • AEIR
  • AEIR
UBERON:0001775ciliary body
  • MmusDv:00000622 month-old stage (mouse)
6.29e3
  • 6.29e3
84.66233
  • 84.66233
AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • UBERON:0000112sexually immature stage
  • UBERON:0007221neonate stage
9.12e3
  • 9.12e3
  • 1.14e4
77.77046
  • 77.77046
  • 72.21857
AEIR
  • AEIR
  • AEIR
UBERON:0000964cornea
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000451 week (mouse)
9.99e3
  • 9.99e3
  • 1.06e4
  • 1.48e4
75.65099
  • 75.65099
  • 74.21238
  • 63.88965
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0007221neonate stage
1.17e4
  • 1.17e4
  • 2.06e4
  • 2.10e4
  • 2.30e4
  • 2.40e4
  • 2.47e4
  • 2.48e4
  • 2.48e4
  • 2.50e4
  • 2.52e4
  • 2.52e4
  • 2.53e4
  • 2.55e4
71.41289
  • 71.41289
  • 49.74771
  • 48.70925
  • 43.92963
  • 41.41572
  • 39.81733
  • 39.63103
  • 39.57443
  • 39.04626
  • 38.67871
  • 38.56519
  • 38.38379
  • 37.89943
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010307conjunctival fornix
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000451 week (mouse)
1.18e4
  • 1.18e4
  • 1.55e4
71.27868
  • 71.27868
  • 62.18937
AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • UBERON:0007221neonate stage
1.63e4
  • 1.63e4
60.23546
  • 60.23546
AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000462 weeks (mouse)
1.84e4
  • 1.84e4
  • 2.29e4
  • 2.47e4
  • 2.50e4
55.15803
  • 55.15803
  • 44.12954
  • 39.85065
  • 39.03262
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
1.86e4
  • 1.86e4
  • 1.88e4
  • 2.17e4
  • 2.27e4
  • 2.32e4
  • 2.33e4
  • 2.43e4
  • 2.50e4
54.54668
  • 54.54668
  • 54.11671
  • 47.03447
  • 44.57699
  • 43.48527
  • 43.13779
  • 40.70672
  • 39.07257
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000127facial nucleus
  • MmusDv:00001134-7 days (mouse)
1.96e4
  • 1.96e4
52.27466
  • 52.27466
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.97e4
  • 1.97e4
  • 2.31e4
  • 2.42e4
51.96640
  • 51.96640
  • 43.70052
  • 41.02513
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
2.06e4
  • 2.06e4
  • 2.43e4
  • 2.48e4
  • 2.49e4
49.89245
  • 49.89245
  • 40.83889
  • 39.46112
  • 39.41394
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
2.09e4
  • 2.09e4
  • 2.44e4
49.01594
  • 49.01594
  • 40.52242
AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
2.18e4
  • 2.18e4
  • 2.19e4
46.74531
  • 46.74531
  • 46.71544
AEIR
  • AEIR
  • AEIR
UBERON:0002308nucleus of brain
  • MmusDv:0000061early adult stage
2.42e4
  • 2.42e4
41.10084
  • 41.10084
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.43e4
  • 2.43e4
  • 2.49e4
40.69714
  • 40.69714
  • 39.40742
AEIR
  • AEIR
  • AEIR
UBERON:0002257ventral horn of spinal cord
  • UBERON:0000104life cycle
  • MmusDv:00001134-7 days (mouse)
2.52e4
  • 2.52e4
  • 2.53e4
38.57913
  • 38.57913
  • 38.31088
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • MmusDv:0000076aged adult stage (mouse)
2.53e4
  • 2.53e4
38.41075
  • 38.41075
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007221neonate stage
2.63e4
  • 2.63e4
35.93403
  • 35.93403
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS27113 (CCDS27113.1)
EMBLAC159002, AK044275, AK044316, BC031440, CH466535, L14935
EnsemblENSMUSG00000040632 (Nrl)
MGIMGI:102567 (Nrl)
Uniprot/SPTREMBLQ543Y0, Q543Y0_MOUSE
Uniprot/SWISSPROTNRL_MOUSE, P54846

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