M. musculus Gene: Hesx1 - ENSMUSG00000040726 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000040726
NameHesx1
Descriptionhomeobox gene expressed in ES cells [Source:MGI Symbol;Acc:MGI:96071]
OrganismMus musculus (mouse)
Synonym(s)hes-1, q61047, q8c477, rpx

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006377remnant of Rathke's pouch
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
892
  • 892
  • 1.32e3
  • 1.03e4
97.82826
  • 97.82826
  • 96.77616
  • 75.00122
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0007221neonate stage
  • MmusDv:0000028Theiler stage 21 (mouse)
1.87e3
  • 1.87e3
  • 2.51e4
95.45610
  • 95.45610
  • 38.75950
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000015Theiler stage 10 (mouse)
  • MmusDv:0000014Theiler stage 09 (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
  • UBERON:0000110neurula stage
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000006Theiler stage 03 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000008Theiler stage 04 (mouse)
  • MmusDv:0000005Theiler stage 02 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
2.00e3
  • 2.00e3
  • 4.35e3
  • 1.20e4
  • 1.20e4
  • 1.84e4
  • 1.89e4
  • 1.91e4
  • 1.91e4
  • 1.92e4
  • 1.95e4
  • 2.00e4
  • 2.01e4
  • 2.04e4
  • 2.13e4
95.12284
  • 95.12284
  • 89.39353
  • 70.86869
  • 70.85894
  • 55.12202
  • 53.90936
  • 53.43803
  • 53.37977
  • 53.29347
  • 52.36834
  • 51.22594
  • 50.91356
  • 50.32057
  • 48.05333
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
2.68e3
  • 2.68e3
  • 1.20e4
  • 2.05e4
  • 2.32e4
  • 2.48e4
  • 2.49e4
93.47942
  • 93.47942
  • 70.66110
  • 49.99025
  • 43.36204
  • 39.46112
  • 39.41394
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
3.42e3
  • 3.42e3
  • 8.21e3
  • 1.91e4
  • 2.37e4
  • 2.49e4
  • 2.50e4
  • 2.56e4
91.66789
  • 91.66789
  • 80.00000
  • 53.55803
  • 42.21874
  • 39.35635
  • 39.18445
  • 37.49745
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005356Rathke's pouch
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
4.10e3
  • 4.10e3
  • 8.79e3
  • 1.17e4
90.00122
  • 90.00122
  • 78.57021
  • 71.42613
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:0000020Theiler stage 13 (mouse)
  • UBERON:0000104life cycle
5.13e3
  • 5.13e3
  • 1.48e4
87.50121
  • 87.50121
  • 63.92987
AEIR
  • AEIR
  • AEIR
UBERON:0002346neurectoderm
  • MmusDv:0000015Theiler stage 10 (mouse)
  • UBERON:0000110neurula stage
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000019Theiler stage 12 (mouse)
5.13e3
  • 5.13e3
  • 8.21e3
  • 1.03e4
  • 1.12e4
87.50121
  • 87.50121
  • 79.99756
  • 74.99756
  • 72.72239
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000925endoderm
  • MmusDv:0000015Theiler stage 10 (mouse)
  • MmusDv:0000014Theiler stage 09 (mouse)
5.13e3
  • 5.13e3
  • 1.37e4
87.49999
  • 87.49999
  • 66.66667
AEIR
  • AEIR
  • AEIR
EMAPA:16144future prosencephalon (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000019Theiler stage 12 (mouse)
5.13e3
  • 5.13e3
  • 7.46e3
87.49755
  • 87.49755
  • 81.81575
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:000005410 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
5.44e3
  • 5.44e3
  • 8.90e3
  • 9.46e3
  • 1.10e4
  • 1.11e4
  • 1.23e4
  • 1.28e4
  • 1.75e4
  • 2.04e4
  • 2.33e4
  • 2.40e4
  • 2.43e4
  • 2.45e4
  • 2.56e4
  • 2.71e4
  • 2.72e4
86.74672
  • 86.74672
  • 78.31149
  • 76.95240
  • 73.22523
  • 72.85900
  • 70.12944
  • 68.74822
  • 57.36947
  • 50.27284
  • 43.28616
  • 41.52843
  • 40.69887
  • 40.30630
  • 37.57892
  • 34.04950
  • 33.74074
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
7.48e3
  • 7.48e3
  • 2.23e4
  • 2.50e4
  • 2.57e4
  • 2.96e4
  • 3.11e4
81.76930
  • 81.76930
  • 45.56365
  • 39.15086
  • 37.45904
  • 27.73378
  • 24.08419
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004044anterior visceral endoderm
  • UBERON:0000110neurula stage
8.21e3
  • 8.21e3
80.00000
  • 80.00000
AEIR
  • AEIR
EMAPA:16095future spinal cord neural plate (mouse)
  • MmusDv:0000019Theiler stage 12 (mouse)
  • UBERON:0000110neurula stage
  • MmusDv:0000020Theiler stage 13 (mouse)
8.79e3
  • 8.79e3
  • 1.17e4
  • 1.37e4
78.57021
  • 78.57021
  • 71.42613
  • 66.66423
AEIR
  • AEIR
  • AEIR
  • AEIR
EMAPA:16071embryo mesoderm (mouse)
  • MmusDv:0000015Theiler stage 10 (mouse)
1.03e4
  • 1.03e4
74.99512
  • 74.99512
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • MmusDv:0000032Theiler stage 23 (mouse)
1.20e4
  • 1.20e4
70.81870
  • 70.81870
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • MmusDv:0000005Theiler stage 02 (mouse)
  • MmusDv:0000006Theiler stage 03 (mouse)
1.21e4
  • 1.21e4
  • 1.65e4
70.47118
  • 70.47118
  • 59.85311
AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • UBERON:0000110neurula stage
1.26e4
  • 1.26e4
69.33238
  • 69.33238
AEIR
  • AEIR
UBERON:0006240future forebrain
  • MmusDv:0000022Theiler stage 15 (mouse)
1.26e4
  • 1.26e4
69.22345
  • 69.22345
AEIR
  • AEIR
UBERON:0005294gonadal ridge
  • MmusDv:0000028Theiler stage 21 (mouse)
1.28e4
  • 1.28e4
68.76329
  • 68.76329
AEIR
  • AEIR
UBERON:0000924ectoderm
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000019Theiler stage 12 (mouse)
1.37e4
  • 1.37e4
  • 1.71e4
66.66423
  • 66.66423
  • 58.32968
AEIR
  • AEIR
  • AEIR
EMAPA:16250foregut diverticulum endoderm (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
1.37e4
  • 1.37e4
66.66179
  • 66.66179
AEIR
  • AEIR
UBERON:0001017central nervous system
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000025Theiler stage 18 (mouse)
  • UBERON:0007221neonate stage
1.37e4
  • 1.37e4
  • 1.54e4
  • 1.64e4
  • 2.05e4
  • 2.59e4
66.66179
  • 66.66179
  • 62.49511
  • 59.99269
  • 49.99756
  • 36.98801
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005439definitive endoderm
  • UBERON:0000110neurula stage
1.37e4
  • 1.37e4
66.66179
  • 66.66179
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
  • 2.11e4
  • 2.15e4
  • 2.17e4
  • 2.22e4
  • 2.55e4
  • 2.61e4
  • 2.62e4
  • 2.67e4
65.85395
  • 65.85395
  • 48.66027
  • 47.64324
  • 47.05323
  • 45.82019
  • 37.87447
  • 36.50455
  • 36.09952
  • 35.00508
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006238future brain
  • UBERON:0000110neurula stage
1.47e4
  • 1.47e4
64.28205
  • 64.28205
AEIR
  • AEIR
UBERON:0009749limb mesenchyme
  • MmusDv:0000026Theiler stage 19 (mouse)
1.47e4
  • 1.47e4
64.28205
  • 64.28205
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:0000022Theiler stage 15 (mouse)
1.54e4
  • 1.54e4
62.49146
  • 62.49146
AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • MmusDv:00000776 month-old stage (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.61e4
  • 1.61e4
  • 1.70e4
  • 2.14e4
  • 2.36e4
60.82055
  • 60.82055
  • 58.57970
  • 47.82864
  • 42.44227
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000358blastocyst
  • UBERON:0000108blastula stage
  • MmusDv:0000008Theiler stage 04 (mouse)
1.66e4
  • 1.66e4
  • 1.99e4
59.65046
  • 59.65046
  • 51.46100
AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
1.70e4
  • 1.70e4
  • 2.09e4
  • 2.17e4
  • 2.34e4
  • 2.43e4
  • 2.44e4
58.59615
  • 58.59615
  • 49.01594
  • 47.05124
  • 42.97444
  • 40.87429
  • 40.52242
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000022Theiler stage 15 (mouse)
  • UBERON:0000068embryo stage
1.78e4
  • 1.78e4
  • 2.04e4
  • 2.33e4
  • 2.48e4
56.60944
  • 56.60944
  • 50.18128
  • 43.10255
  • 39.56475
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
1.82e4
  • 1.82e4
55.54174
  • 55.54174
AEIR
  • AEIR
UBERON:0004066frontonasal prominence
  • MmusDv:0000025Theiler stage 18 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.86e4
  • 1.86e4
  • 1.93e4
54.65426
  • 54.65426
  • 52.94701
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000097late adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.97e4
  • 1.97e4
  • 2.06e4
  • 2.42e4
  • 2.42e4
  • 2.56e4
52.03878
  • 52.03878
  • 49.89516
  • 41.09589
  • 40.93196
  • 37.57940
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
1.99e4
  • 1.99e4
  • 2.13e4
  • 2.24e4
  • 2.27e4
  • 2.28e4
  • 2.50e4
51.55544
  • 51.55544
  • 48.05340
  • 45.41984
  • 44.58542
  • 44.46966
  • 39.15659
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
1.99e4
  • 1.99e4
51.49299
  • 51.49299
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
2.01e4
  • 2.01e4
  • 2.22e4
50.94528
  • 50.94528
  • 45.90769
AEIR
  • AEIR
  • AEIR
UBERON:0000323late embryo
  • UBERON:0007220late embryonic stage
2.03e4
  • 2.03e4
50.57138
  • 50.57138
AEIR
  • AEIR
UBERON:0000165mouth
  • MmusDv:0000019Theiler stage 12 (mouse)
2.05e4
  • 2.05e4
50.00122
  • 50.00122
AEIR
  • AEIR
UBERON:0000081metanephros
  • UBERON:0000104life cycle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
2.07e4
  • 2.07e4
  • 2.43e4
  • 2.46e4
49.60548
  • 49.60548
  • 40.67264
  • 39.99721
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000097late adult stage
  • MmusDv:00000633 month-old stage (mouse)
2.09e4
  • 2.09e4
  • 2.33e4
  • 2.38e4
  • 2.39e4
  • 2.42e4
  • 2.43e4
  • 2.47e4
49.17016
  • 49.17016
  • 43.09058
  • 41.92729
  • 41.83467
  • 40.93271
  • 40.71902
  • 39.72234
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • MmusDv:0000027Theiler stage 20 (mouse)
2.14e4
  • 2.14e4
47.87835
  • 47.87835
AEIR
  • AEIR
UBERON:0005147metanephric renal vesicle
  • MmusDv:0000027Theiler stage 20 (mouse)
2.22e4
  • 2.22e4
45.84694
  • 45.84694
AEIR
  • AEIR
UBERON:0005867mandibular prominence
  • MmusDv:0000023Theiler stage 16 (mouse)
2.42e4
  • 2.42e4
41.08914
  • 41.08914
AEIR
  • AEIR
UBERON:0000056ureter
  • MmusDv:0000032Theiler stage 23 (mouse)
2.44e4
  • 2.44e4
40.44729
  • 40.44729
AEIR
  • AEIR
UBERON:0001869cerebral hemisphere
  • MmusDv:0000061early adult stage
2.46e4
  • 2.46e4
39.99342
  • 39.99342
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
2.48e4
  • 2.48e4
  • 2.61e4
39.58481
  • 39.58481
  • 36.47818
AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
2.48e4
  • 2.48e4
  • 2.49e4
  • 2.49e4
  • 3.38e4
39.45704
  • 39.45704
  • 39.33669
  • 39.33002
  • 17.69044
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.68e4
  • 2.68e4
34.61878
  • 34.61878
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS26884 (CCDS26884.1)
EMBLAC124603, AK082831, BC132051, BC132053, BC145262, U40720, X80040
EnsemblENSMUSG00000040726 (Hesx1)
MGIMGI:96071 (Hesx1)
Uniprot/SWISSPROTHESX1_MOUSE, Q61658

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