M. musculus Gene: Scd4 - ENSMUSG00000050195 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000050195
NameScd4
Descriptionstearoyl-coenzyme A desaturase 4 [Source:MGI Symbol;Acc:MGI:2670997]
OrganismMus musculus (mouse)
Synonym(s)acod4, b9eiy5

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000462 weeks (mouse)
7.03e3
  • 7.03e3
  • 8.35e3
  • 1.07e4
  • 2.07e4
83.03
  • 83.03
  • 79.84
  • 74.19
  • 49.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:0000029Theiler stage 22 (mouse)
1.16e4
  • 1.16e4
71.99
  • 71.99
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.21e4
  • 1.21e4
70.67
  • 70.67
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
1.30e4
  • 1.30e4
  • 1.46e4
  • 1.79e4
  • 2.53e4
68.70
  • 68.70
  • 64.87
  • 56.74
  • 38.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.42e4
  • 1.42e4
  • 1.64e4
  • 1.82e4
65.71
  • 65.71
  • 60.36
  • 56.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.43e4
  • 1.43e4
  • 1.63e4
65.36
  • 65.36
  • 60.76
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.59e4
  • 1.59e4
61.62
  • 61.62
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000528 weeks (mouse)
1.63e4
  • 1.63e4
  • 2.53e4
60.70
  • 60.70
  • 38.93
AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
1.63e4
  • 1.63e4
60.56
  • 60.56
AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
  • 1.77e4
59.00
  • 59.00
  • 57.17
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
  • 1.95e4
58.31
  • 58.31
  • 52.96
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.74e4
  • 1.74e4
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
56.89
  • 56.89
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
1.81e4
  • 1.81e4
  • 2.08e4
  • 2.09e4
  • 2.37e4
56.22
  • 56.22
  • 49.70
  • 49.65
  • 42.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.82e4
  • 1.82e4
  • 2.14e4
  • 2.17e4
  • 2.49e4
  • 3.08e4
56.13
  • 56.13
  • 48.36
  • 47.59
  • 39.86
  • 25.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
1.82e4
  • 1.82e4
56.13
  • 56.13
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.83e4
  • 1.83e4
55.78
  • 55.78
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.86e4
  • 1.86e4
55.02
  • 55.02
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
1.86e4
  • 1.86e4
  • 1.89e4
  • 2.06e4
55.02
  • 55.02
  • 54.32
  • 50.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
54.71
  • 54.71
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
1.89e4
  • 1.89e4
54.39
  • 54.39
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
1.90e4
  • 1.90e4
  • 1.99e4
54.07
  • 54.07
  • 51.96
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.92e4
  • 1.92e4
53.67
  • 53.67
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
1.94e4
  • 1.94e4
53.21
  • 53.21
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.94e4
  • 1.94e4
53.16
  • 53.16
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.95e4
  • 1.95e4
52.92
  • 52.92
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.96e4
  • 1.96e4
52.66
  • 52.66
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.97e4
  • 1.97e4
52.52
  • 52.52
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.97e4
  • 1.97e4
52.51
  • 52.51
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.01e4
  • 2.01e4
51.46
  • 51.46
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
2.07e4
  • 2.07e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
2.12e4
  • 2.12e4
  • 2.21e4
48.91
  • 48.91
  • 46.70
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
2.13e4
  • 2.13e4
  • 2.54e4
  • 3.09e4
48.58
  • 48.58
  • 38.61
  • 25.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.15e4
  • 2.15e4
48.16
  • 48.16
AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
2.17e4
  • 2.17e4
47.52
  • 47.52
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.29e4
  • 2.29e4
44.60
  • 44.60
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.32e4
  • 2.32e4
43.96
  • 43.96
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.34e4
  • 2.34e4
43.55
  • 43.55
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.41e4
  • 2.41e4
41.70
  • 41.70
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
2.44e4
  • 2.44e4
41.09
  • 41.09
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.50e4
  • 2.50e4
39.76
  • 39.76
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.50e4
  • 2.50e4
39.73
  • 39.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
2.52e4
  • 2.52e4
  • 2.56e4
  • 2.83e4
39.26
  • 39.26
  • 38.30
  • 31.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
2.62e4
  • 2.62e4
  • 2.70e4
36.76
  • 36.76
  • 34.76
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Cross-references

CCDSCCDS29849 (CCDS29849.1)
EMBLAC123853, AY430080, BC141234, CH466534
EnsemblENSMUSG00000050195 (Scd4)
MGIMGI:2670997 (Scd4)
Uniprot/SWISSPROTQ6T707, SCD4_MOUSE

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