M. musculus Gene: Efcab5 - ENSMUSG00000050944 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000050944
NameEfcab5
DescriptionEF-hand calcium binding domain 5 [Source:MGI Symbol;Acc:MGI:2442440]
OrganismMus musculus (mouse)
Synonym(s)4930563a03rik, b0qzj9, q5nc53, q8cbn1, q8cdp1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
304
  • 304
99.27
  • 99.27
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
386
  • 386
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
884
  • 884
  • 1.14e3
  • 1.04e4
97.87
  • 97.87
  • 97.26
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
74.20
  • 74.20
AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
1.17e4
  • 1.17e4
71.68
  • 71.68
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000528 weeks (mouse)
1.19e4
  • 1.19e4
71.37
  • 71.37
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.19e4
  • 1.19e4
71.19
  • 71.19
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
70.75
  • 70.75
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
1.25e4
  • 1.25e4
69.74
  • 69.74
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
1.29e4
  • 1.29e4
68.87
  • 68.87
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
67.78
  • 67.78
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
67.26
  • 67.26
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
  • 1.70e4
67.07
  • 67.07
  • 58.96
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
1.37e4
  • 1.37e4
  • 1.47e4
  • 1.48e4
66.89
  • 66.89
  • 64.58
  • 64.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
65.26
  • 65.26
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.44e4
  • 1.44e4
65.20
  • 65.20
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.44e4
  • 1.44e4
  • 1.58e4
65.16
  • 65.16
  • 61.95
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.44e4
  • 1.44e4
65.13
  • 65.13
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
64.55
  • 64.55
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
1.47e4
  • 1.47e4
  • 1.54e4
  • 3.09e4
64.43
  • 64.43
  • 62.75
  • 25.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
64.31
  • 64.31
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
63.76
  • 63.76
AEIR
  • AEIR
UBERON:0002371bone marrow
  • MmusDv:00000528 weeks (mouse)
1.50e4
  • 1.50e4
63.75
  • 63.75
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
1.51e4
  • 1.51e4
63.64
  • 63.64
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
63.04
  • 63.04
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.55e4
  • 1.55e4
  • 1.57e4
  • 1.63e4
62.52
  • 62.52
  • 61.99
  • 60.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
1.58e4
  • 1.58e4
  • 1.72e4
  • 1.72e4
  • 1.83e4
61.89
  • 61.89
  • 58.58
  • 58.42
  • 55.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
1.71e4
  • 1.71e4
58.71
  • 58.71
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
58.41
  • 58.41
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.73e4
  • 1.73e4
  • 1.77e4
  • 1.78e4
58.26
  • 58.26
  • 57.24
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
1.73e4
  • 1.73e4
  • 2.07e4
58.20
  • 58.20
  • 50.05
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
  • 1.92e4
57.50
  • 57.50
  • 53.69
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
  • 1.79e4
56.99
  • 56.99
  • 56.86
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.80e4
  • 1.80e4
  • 1.84e4
56.49
  • 56.49
  • 55.65
AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
1.83e4
  • 1.83e4
55.93
  • 55.93
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
1.83e4
  • 1.83e4
55.90
  • 55.90
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.85e4
  • 1.85e4
  • 2.21e4
55.38
  • 55.38
  • 46.55
AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.85e4
  • 1.85e4
  • 2.55e4
55.34
  • 55.34
  • 38.33
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.87e4
  • 1.87e4
54.88
  • 54.88
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
54.59
  • 54.59
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
1.91e4
  • 1.91e4
  • 1.95e4
  • 1.98e4
  • 1.99e4
  • 2.08e4
53.95
  • 53.95
  • 52.93
  • 52.09
  • 51.97
  • 49.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
52.40
  • 52.40
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.98e4
  • 1.98e4
52.08
  • 52.08
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.99e4
  • 1.99e4
51.97
  • 51.97
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
51.95
  • 51.95
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
2.08e4
  • 2.08e4
49.78
  • 49.78
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
2.09e4
  • 2.09e4
  • 2.34e4
  • 2.41e4
49.44
  • 49.44
  • 43.61
  • 41.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.11e4
  • 2.11e4
49.12
  • 49.12
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.31e4
  • 2.31e4
44.16
  • 44.16
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.62e4
  • 2.62e4
36.66
  • 36.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

CCDSCCDS36232 (CCDS36232.1)
EMBLAK029790, AK035698, AL603842, AL663066, BC127154, BX321897, DT929470
EnsemblENSMUSG00000050944 (Efcab5)
MGIMGI:2442440 (Efcab5)
Uniprot/SPTREMBLA0A0A0MQI1, A0A0A0MQI1_MOUSE
Uniprot/SWISSPROTA0JP43, EFCB5_MOUSE

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