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M. musculus Gene: Msantd1 - ENSMUSG00000051246 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000051246
NameMsantd1
DescriptionMyb/SANT-like DNA-binding domain containing 1 [Source:MGI Symbol;Acc:MGI:2684990]
OrganismMus musculus (mouse)
Synonym(s)a930005i04rik, gm144, loc231132
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001890forebrain
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
5.66e3
  • 5.66e3
  • 1.25e4
  • 1.26e4
  • 1.34e4
  • 1.56e4
  • 2.02e4
86.41
  • 86.41
  • 70.00
  • 69.86
  • 67.74
  • 62.54
  • 51.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.01e4
  • 1.01e4
  • 1.20e4
  • 1.25e4
  • 1.49e4
  • 1.58e4
  • 1.88e4
75.75
  • 75.75
  • 71.30
  • 69.94
  • 64.32
  • 62.08
  • 54.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
1.07e4
  • 1.07e4
  • 1.28e4
  • 1.32e4
  • 1.40e4
  • 1.44e4
  • 1.59e4
74.24
  • 74.24
  • 69.29
  • 68.37
  • 66.50
  • 65.45
  • 61.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
1.08e4
  • 1.08e4
74.01
  • 74.01
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
1.15e4
  • 1.15e4
  • 1.37e4
  • 1.38e4
  • 1.45e4
  • 1.53e4
72.48
  • 72.48
  • 67.23
  • 66.95
  • 65.16
  • 63.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
72.44
  • 72.44
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
1.15e4
  • 1.15e4
  • 1.83e4
72.37
  • 72.37
  • 56.06
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
  • 1.58e4
71.32
  • 71.32
  • 62.09
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
1.21e4
  • 1.21e4
70.98
  • 70.98
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
70.84
  • 70.84
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.22e4
  • 1.22e4
  • 1.44e4
  • 1.71e4
  • 1.72e4
  • 1.73e4
  • 1.80e4
  • 1.81e4
  • 1.97e4
  • 1.98e4
  • 2.29e4
70.83
  • 70.83
  • 65.43
  • 58.99
  • 58.69
  • 58.59
  • 56.89
  • 56.63
  • 52.85
  • 52.46
  • 44.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000633 month-old stage (mouse)
1.26e4
  • 1.26e4
  • 1.26e4
  • 1.29e4
  • 1.35e4
  • 1.48e4
  • 3.11e4
69.80
  • 69.80
  • 69.73
  • 69.03
  • 67.63
  • 64.53
  • 25.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000112sexually immature stage
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
1.28e4
  • 1.28e4
  • 1.30e4
  • 1.31e4
  • 1.33e4
  • 1.37e4
69.30
  • 69.30
  • 68.91
  • 68.65
  • 68.05
  • 67.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:0000032Theiler stage 23 (mouse)
1.30e4
  • 1.30e4
68.74
  • 68.74
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
68.55
  • 68.55
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.32e4
  • 1.32e4
  • 2.37e4
68.36
  • 68.36
  • 43.23
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
1.34e4
  • 1.34e4
  • 1.61e4
  • 1.82e4
67.94
  • 67.94
  • 61.32
  • 56.34
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.34e4
  • 1.34e4
67.86
  • 67.86
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
1.36e4
  • 1.36e4
  • 1.59e4
67.26
  • 67.26
  • 61.76
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
67.10
  • 67.10
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
1.38e4
  • 1.38e4
66.95
  • 66.95
AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
66.95
  • 66.95
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.38e4
  • 1.38e4
66.89
  • 66.89
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.41e4
  • 1.41e4
66.20
  • 66.20
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.42e4
  • 1.42e4
  • 1.55e4
  • 1.56e4
  • 1.82e4
65.94
  • 65.94
  • 62.73
  • 62.46
  • 56.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
65.77
  • 65.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
1.43e4
  • 1.43e4
  • 1.48e4
  • 1.63e4
65.64
  • 65.64
  • 64.59
  • 60.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
65.39
  • 65.39
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
65.35
  • 65.35
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
65.30
  • 65.30
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.45e4
  • 1.45e4
  • 1.71e4
  • 2.02e4
  • 2.04e4
65.18
  • 65.18
  • 59.02
  • 51.61
  • 50.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000061early adult stage
1.46e4
  • 1.46e4
  • 1.60e4
  • 3.30e4
64.87
  • 64.87
  • 61.55
  • 20.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
1.48e4
  • 1.48e4
  • 1.49e4
  • 1.64e4
64.58
  • 64.58
  • 64.26
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.48e4
  • 1.48e4
  • 1.80e4
  • 2.00e4
64.57
  • 64.57
  • 56.83
  • 51.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
64.50
  • 64.50
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
  • 2.03e4
  • 2.04e4
64.31
  • 64.31
  • 51.26
  • 51.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
64.06
  • 64.06
AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
63.77
  • 63.77
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.51e4
  • 1.51e4
  • 1.52e4
  • 1.56e4
  • 1.71e4
  • 1.77e4
  • 1.81e4
  • 1.85e4
  • 1.92e4
  • 1.94e4
  • 2.41e4
63.73
  • 63.73
  • 63.51
  • 62.65
  • 58.91
  • 57.57
  • 56.55
  • 55.71
  • 53.96
  • 53.34
  • 42.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.52e4
  • 1.52e4
  • 1.53e4
  • 1.63e4
63.53
  • 63.53
  • 63.28
  • 60.87
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
1.53e4
  • 1.53e4
63.27
  • 63.27
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:0000061early adult stage
1.54e4
  • 1.54e4
  • 1.61e4
  • 1.81e4
  • 2.08e4
63.02
  • 63.02
  • 61.36
  • 56.53
  • 50.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
62.97
  • 62.97
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
1.55e4
  • 1.55e4
  • 1.80e4
  • 1.95e4
62.71
  • 62.71
  • 56.73
  • 53.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
1.60e4
  • 1.60e4
61.67
  • 61.67
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
  • 1.62e4
61.55
  • 61.55
  • 61.04
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
61.15
  • 61.15
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
61.02
  • 61.02
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
  • 2.06e4
60.51
  • 60.51
  • 50.45
AEIR
  • AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
60.24
  • 60.24
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
59.91
  • 59.91
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.68e4
  • 1.68e4
59.65
  • 59.65
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.69e4
  • 1.69e4
  • 1.78e4
  • 1.81e4
  • 1.81e4
  • 1.82e4
59.52
  • 59.52
  • 57.26
  • 56.53
  • 56.51
  • 56.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
1.69e4
  • 1.69e4
59.34
  • 59.34
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
59.29
  • 59.29
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
1.70e4
  • 1.70e4
  • 1.73e4
  • 1.80e4
  • 1.93e4
59.26
  • 59.26
  • 58.52
  • 56.75
  • 53.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
1.70e4
  • 1.70e4
59.17
  • 59.17
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
1.70e4
  • 1.70e4
59.17
  • 59.17
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.72e4
  • 1.72e4
  • 1.89e4
  • 1.90e4
  • 2.07e4
58.64
  • 58.64
  • 54.71
  • 54.49
  • 50.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.74e4
  • 1.74e4
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
1.77e4
  • 1.77e4
57.62
  • 57.62
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
1.79e4
  • 1.79e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.90e4
  • 1.90e4
54.38
  • 54.38
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.91e4
  • 1.91e4
  • 2.04e4
54.12
  • 54.12
  • 51.03
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.92e4
  • 1.92e4
53.93
  • 53.93
AEIR
  • AEIR
UBERON:0004134proximal tubule
  • MmusDv:00000622 month-old stage (mouse)
1.95e4
  • 1.95e4
53.27
  • 53.27
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
2.00e4
  • 2.00e4
52.12
  • 52.12
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.01e4
  • 2.01e4
51.80
  • 51.80
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
2.07e4
  • 2.07e4
50.37
  • 50.37
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.19e4
  • 2.19e4
47.36
  • 47.36
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
2.41e4
  • 2.41e4
42.27
  • 42.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000051246.

Cross-references

CCDSCCDS19221 (CCDS19221.1), CCDS80265 (CCDS80265.1)
EnsemblENSMUSG00000051246 (Msantd1)
MGIMGI:2684990 (Msantd1)
EMBLAC133204, AK044284, BC116928, BC116930, CH466524
Uniprot/SPTREMBLA0A0J9YU52, A0A0J9YU52_MOUSE
Uniprot/SWISSPROTMSD1_MOUSE, Q8BIL2

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