M. musculus Gene: Pcdhb2 - ENSMUSG00000051599 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000051599
NamePcdhb2
Descriptionprotocadherin beta 2 [Source:MGI Symbol;Acc:MGI:2136735]
OrganismMus musculus (mouse)
Synonym(s)pcdhbb

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000633 month-old stage (mouse)
1.49e4
  • 1.49e4
  • 1.78e4
  • 2.06e4
  • 2.11e4
  • 2.12e4
  • 2.21e4
  • 2.25e4
63.60838
  • 63.60838
  • 56.71052
  • 49.72541
  • 48.47538
  • 48.33623
  • 46.19183
  • 45.09848
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
1.52e4
  • 1.52e4
62.90311
  • 62.90311
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:000005410 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000695 month-old stage (mouse)
  • UBERON:0000068embryo stage
1.60e4
  • 1.60e4
  • 1.71e4
  • 1.73e4
  • 1.88e4
  • 1.93e4
  • 2.10e4
  • 2.34e4
  • 2.39e4
  • 2.40e4
  • 2.42e4
  • 2.47e4
  • 2.49e4
  • 2.51e4
  • 2.51e4
  • 2.51e4
  • 2.53e4
60.91070
  • 60.91070
  • 58.26294
  • 57.83190
  • 54.08956
  • 53.01972
  • 48.84095
  • 42.87369
  • 41.71766
  • 41.41771
  • 41.09392
  • 39.67664
  • 39.36296
  • 38.88624
  • 38.83605
  • 38.76507
  • 38.28310
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
1.66e4
  • 1.66e4
  • 1.82e4
  • 2.20e4
  • 2.49e4
  • 2.49e4
59.61731
  • 59.61731
  • 55.54048
  • 46.35612
  • 39.33669
  • 39.33002
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.76e4
  • 1.76e4
  • 2.42e4
  • 2.50e4
  • 2.50e4
  • 2.51e4
  • 2.55e4
57.04128
  • 57.04128
  • 41.03686
  • 39.14598
  • 39.02218
  • 38.79101
  • 37.95983
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.80e4
  • 1.80e4
  • 2.45e4
56.16575
  • 56.16575
  • 40.39154
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • MmusDv:00000776 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
1.81e4
  • 1.81e4
  • 1.83e4
56.00375
  • 56.00375
  • 55.47673
AEIR
  • AEIR
  • AEIR
UBERON:0002435striatum
  • MmusDv:00000776 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000097late adult stage
1.81e4
  • 1.81e4
  • 1.85e4
  • 2.05e4
  • 2.50e4
  • 2.51e4
  • 2.54e4
55.93270
  • 55.93270
  • 54.97738
  • 50.08051
  • 39.07662
  • 38.74452
  • 38.08519
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000061early adult stage
1.82e4
  • 1.82e4
  • 2.05e4
  • 2.21e4
  • 2.40e4
  • 2.47e4
  • 2.49e4
  • 2.50e4
55.64480
  • 55.64480
  • 49.92484
  • 46.23854
  • 41.38542
  • 39.73428
  • 39.19416
  • 39.15659
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
1.88e4
  • 1.88e4
  • 2.44e4
54.29614
  • 54.29614
  • 40.56926
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.95e4
  • 1.95e4
  • 2.05e4
  • 2.41e4
  • 2.56e4
52.48400
  • 52.48400
  • 49.96831
  • 41.31105
  • 37.49745
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.96e4
  • 1.96e4
  • 2.07e4
  • 2.19e4
  • 2.26e4
  • 2.57e4
52.20753
  • 52.20753
  • 49.56948
  • 46.55934
  • 44.98954
  • 37.45904
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.97e4
  • 1.97e4
  • 2.25e4
  • 2.39e4
  • 2.47e4
  • 2.53e4
  • 2.56e4
  • 2.61e4
  • 2.66e4
51.98285
  • 51.98285
  • 45.22886
  • 41.74650
  • 39.70342
  • 38.41355
  • 37.57892
  • 36.46365
  • 35.22503
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000451 week (mouse)
2.01e4
  • 2.01e4
  • 2.18e4
  • 2.51e4
51.02603
  • 51.02603
  • 46.77084
  • 38.83608
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
2.12e4
  • 2.12e4
48.33519
  • 48.33519
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.13e4
  • 2.13e4
48.10849
  • 48.10849
AEIR
  • AEIR
UBERON:0001950neocortex
  • MmusDv:0000076aged adult stage (mouse)
2.14e4
  • 2.14e4
47.74713
  • 47.74713
AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000097late adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:00000506 weeks (mouse)
2.23e4
  • 2.23e4
  • 2.36e4
  • 2.52e4
  • 2.52e4
  • 2.52e4
  • 2.52e4
  • 2.52e4
  • 2.53e4
  • 2.53e4
  • 2.54e4
45.65490
  • 45.65490
  • 42.54821
  • 38.68165
  • 38.66462
  • 38.61058
  • 38.58074
  • 38.48012
  • 38.28310
  • 38.26406
  • 38.17710
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.38e4
  • 2.38e4
  • 2.40e4
  • 2.49e4
  • 2.49e4
  • 2.51e4
  • 2.61e4
  • 2.62e4
  • 2.67e4
42.06709
  • 42.06709
  • 41.46447
  • 39.39696
  • 39.32168
  • 38.80804
  • 36.35610
  • 36.09952
  • 34.96871
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
2.38e4
  • 2.38e4
  • 2.50e4
  • 2.52e4
41.98942
  • 41.98942
  • 39.11858
  • 38.54047
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002308nucleus of brain
  • MmusDv:0000061early adult stage
2.42e4
  • 2.42e4
41.10084
  • 41.10084
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000076aged adult stage (mouse)
2.45e4
  • 2.45e4
  • 2.54e4
  • 2.61e4
40.36635
  • 40.36635
  • 38.00871
  • 36.34540
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • MmusDv:00000622 month-old stage (mouse)
2.46e4
  • 2.46e4
39.95710
  • 39.95710
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000451 week (mouse)
2.50e4
  • 2.50e4
  • 2.51e4
39.04327
  • 39.04327
  • 38.76015
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.60e4
  • 2.60e4
36.74672
  • 36.74672
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.60e4
  • 2.60e4
  • 2.78e4
36.58779
  • 36.58779
  • 32.29955
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

CCDSCCDS29170 (CCDS29170.1)
EMBLAC020974, AY013781
EnsemblENSMUSG00000051599 (Pcdhb2)
MGIMGI:2136735 (Pcdhb2)
Uniprot/SPTREMBLA0A0A6YW85, A0A0A6YW85_MOUSE, Q91Y00, Q91Y00_MOUSE

Do not show this banner again