M. musculus Gene: Prdm9 - ENSMUSG00000051977 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000051977
NamePrdm9
DescriptionPR domain containing 9 [Source:MGI Symbol;Acc:MGI:2384854]
OrganismMus musculus (mouse)
Synonym(s)bc012016, dsbc1, g1-419-29, meisetz, prdm9-b, rcr1, repro7

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
1.90e3
  • 1.90e3
95.40978
  • 95.40978
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000517 weeks (mouse)
7.68e3
  • 7.68e3
  • 1.88e4
81.45493
  • 81.45493
  • 54.53329
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000644 month-old stage (mouse)
8.08e3
  • 8.08e3
  • 1.92e4
  • 2.03e4
  • 2.31e4
80.50145
  • 80.50145
  • 53.68129
  • 51.08008
  • 44.31494
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
8.24e3
  • 8.24e3
80.12071
  • 80.12071
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000539 weeks (mouse)
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000644 month-old stage (mouse)
8.47e3
  • 8.47e3
  • 1.82e4
  • 1.98e4
  • 1.98e4
  • 1.98e4
  • 2.12e4
79.56398
  • 79.56398
  • 55.95217
  • 52.26951
  • 52.15980
  • 52.09297
  • 48.72103
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
8.47e3
  • 8.47e3
  • 9.18e3
  • 9.67e3
  • 1.03e4
  • 1.65e4
79.56178
  • 79.56178
  • 77.83969
  • 76.64749
  • 75.16511
  • 60.22233
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
8.70e3
  • 8.70e3
78.99889
  • 78.99889
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
8.87e3
  • 8.87e3
78.58110
  • 78.58110
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:0000097late adult stage
8.88e3
  • 8.88e3
  • 1.02e4
  • 1.82e4
  • 1.92e4
  • 2.04e4
  • 2.07e4
  • 2.12e4
78.56485
  • 78.56485
  • 75.31514
  • 56.03513
  • 53.75128
  • 50.82885
  • 50.07479
  • 48.92745
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
9.18e3
  • 9.18e3
77.82728
  • 77.82728
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000517 weeks (mouse)
9.56e3
  • 9.56e3
  • 1.43e4
  • 1.89e4
  • 2.13e4
76.91183
  • 76.91183
  • 65.56915
  • 54.37675
  • 48.58368
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
9.67e3
  • 9.67e3
76.64655
  • 76.64655
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
9.87e3
  • 9.87e3
76.17960
  • 76.17960
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
9.88e3
  • 9.88e3
76.14483
  • 76.14483
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.90e3
  • 9.90e3
  • 2.03e4
76.10604
  • 76.10604
  • 50.95415
AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000075middle aged stage (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:0000061early adult stage
9.94e3
  • 9.94e3
  • 1.64e4
  • 1.76e4
  • 2.46e4
76.00917
  • 76.00917
  • 60.39230
  • 57.42805
  • 40.56704
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
9.98e3
  • 9.98e3
  • 1.23e4
  • 1.64e4
  • 2.50e4
75.91043
  • 75.91043
  • 70.37052
  • 60.52752
  • 39.59232
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.00e4
  • 1.00e4
75.85396
  • 75.85396
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
75.61082
  • 75.61082
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
75.33626
  • 75.33626
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000068embryo stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
1.07e4
  • 1.07e4
  • 1.65e4
  • 1.73e4
  • 1.76e4
  • 1.91e4
  • 2.13e4
  • 2.19e4
  • 2.26e4
74.27644
  • 74.27644
  • 60.22228
  • 58.14256
  • 57.42361
  • 54.00652
  • 48.52327
  • 47.14051
  • 45.42904
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
1.07e4
  • 1.07e4
74.18117
  • 74.18117
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
73.49394
  • 73.49394
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000061early adult stage
1.10e4
  • 1.10e4
  • 1.42e4
  • 1.43e4
  • 1.93e4
  • 2.01e4
  • 2.02e4
  • 2.12e4
  • 2.51e4
73.43493
  • 73.43493
  • 65.75903
  • 65.57653
  • 53.41193
  • 51.57513
  • 51.30502
  • 48.81159
  • 39.33573
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.10e4
  • 1.10e4
  • 1.44e4
  • 1.71e4
  • 2.09e4
  • 2.29e4
73.35587
  • 73.35587
  • 65.14312
  • 58.82588
  • 49.56712
  • 44.82617
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
73.29186
  • 73.29186
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
72.84078
  • 72.84078
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.14e4
  • 1.14e4
  • 1.32e4
  • 1.66e4
  • 1.76e4
72.55985
  • 72.55985
  • 68.16420
  • 59.81676
  • 57.46120
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
1.14e4
  • 1.14e4
72.44568
  • 72.44568
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
1.14e4
  • 1.14e4
  • 1.19e4
  • 1.49e4
  • 2.07e4
  • 2.22e4
  • 2.31e4
72.36758
  • 72.36758
  • 71.15828
  • 64.06866
  • 49.93329
  • 46.29017
  • 44.27161
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
1.14e4
  • 1.14e4
  • 1.67e4
72.36538
  • 72.36538
  • 59.76733
AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
1.15e4
  • 1.15e4
72.21352
  • 72.21352
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.17e4
  • 1.17e4
  • 1.40e4
  • 1.51e4
71.79944
  • 71.79944
  • 66.29457
  • 63.47576
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.17e4
  • 1.17e4
  • 2.49e4
71.73991
  • 71.73991
  • 39.88682
AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
1.22e4
  • 1.22e4
70.50031
  • 70.50031
AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
1.22e4
  • 1.22e4
70.49734
  • 70.49734
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.24e4
  • 1.24e4
70.01521
  • 70.01521
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
69.99365
  • 69.99365
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
69.87289
  • 69.87289
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • MmusDv:0000005Theiler stage 02 (mouse)
  • MmusDv:0000006Theiler stage 03 (mouse)
1.26e4
  • 1.26e4
  • 1.80e4
69.49037
  • 69.49037
  • 56.43749
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000462 weeks (mouse)
1.28e4
  • 1.28e4
  • 1.86e4
  • 2.27e4
  • 2.43e4
  • 2.49e4
  • 2.51e4
69.16241
  • 69.16241
  • 55.17605
  • 45.29355
  • 41.39083
  • 39.90089
  • 39.40164
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.33e4
  • 1.33e4
  • 1.54e4
67.83378
  • 67.83378
  • 62.74935
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000068embryo stage
1.36e4
  • 1.36e4
  • 1.57e4
  • 2.09e4
  • 2.17e4
  • 2.43e4
  • 2.49e4
  • 2.49e4
  • 2.49e4
  • 2.50e4
  • 2.50e4
  • 2.55e4
  • 2.55e4
67.28827
  • 67.28827
  • 62.10768
  • 49.49042
  • 47.68735
  • 41.22093
  • 39.83448
  • 39.80879
  • 39.79136
  • 39.75234
  • 39.54150
  • 38.47859
  • 38.46480
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005410 weeks (mouse)
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:00000539 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00001134-7 days (mouse)
1.37e4
  • 1.37e4
  • 1.39e4
  • 1.52e4
  • 1.54e4
  • 1.56e4
  • 1.60e4
  • 1.72e4
  • 1.77e4
  • 1.79e4
  • 1.81e4
  • 1.84e4
  • 1.88e4
  • 1.96e4
  • 1.99e4
  • 2.05e4
  • 2.09e4
  • 2.16e4
  • 2.28e4
66.91929
  • 66.91929
  • 66.47378
  • 63.41663
  • 62.86089
  • 62.24225
  • 61.25782
  • 58.47023
  • 57.24715
  • 56.71388
  • 56.24638
  • 55.57624
  • 54.61169
  • 52.75123
  • 51.87458
  • 50.54198
  • 49.46019
  • 47.77760
  • 44.98740
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.37e4
  • 1.37e4
66.82366
  • 66.82366
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
1.39e4
  • 1.39e4
  • 2.35e4
  • 2.50e4
  • 2.51e4
  • 2.54e4
66.54998
  • 66.54998
  • 43.30022
  • 39.63530
  • 39.50867
  • 38.73788
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000506 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
1.45e4
  • 1.45e4
  • 1.53e4
  • 1.53e4
  • 1.74e4
  • 1.74e4
  • 1.91e4
  • 1.99e4
  • 2.01e4
  • 2.02e4
  • 2.16e4
  • 2.18e4
  • 2.25e4
65.01690
  • 65.01690
  • 62.97653
  • 62.94674
  • 58.10297
  • 57.90785
  • 53.97127
  • 51.91738
  • 51.47991
  • 51.32984
  • 47.92938
  • 47.46043
  • 45.62057
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000495 weeks (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000451 week (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.50e4
  • 1.50e4
  • 1.65e4
  • 1.72e4
  • 1.76e4
  • 1.83e4
  • 2.01e4
  • 2.23e4
  • 2.59e4
63.72492
  • 63.72492
  • 60.10949
  • 58.58803
  • 57.46564
  • 55.94070
  • 51.36219
  • 46.21647
  • 37.41202
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
63.46934
  • 63.46934
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
1.58e4
  • 1.58e4
61.90703
  • 61.90703
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:0000076aged adult stage (mouse)
1.60e4
  • 1.60e4
  • 1.61e4
  • 1.63e4
61.49413
  • 61.49413
  • 61.22190
  • 60.74971
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005412optic fissure
  • MmusDv:0000024Theiler stage 17 (mouse)
1.69e4
  • 1.69e4
59.18373
  • 59.18373
AEIR
  • AEIR
UBERON:0001496ascending aorta
  • MmusDv:00000484 weeks (mouse)
1.69e4
  • 1.69e4
59.08720
  • 59.08720
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
59.05980
  • 59.05980
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
  • 1.75e4
58.69746
  • 58.69746
  • 57.68030
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000451 week (mouse)
1.75e4
  • 1.75e4
  • 2.22e4
  • 2.36e4
57.71840
  • 57.71840
  • 46.52528
  • 42.91779
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • MmusDv:00000776 month-old stage (mouse)
  • MmusDv:0000097late adult stage
1.79e4
  • 1.79e4
  • 1.88e4
56.74054
  • 56.74054
  • 54.59225
AEIR
  • AEIR
  • AEIR
UBERON:0002137aortic valve
  • MmusDv:00000484 weeks (mouse)
1.80e4
  • 1.80e4
56.57279
  • 56.57279
AEIR
  • AEIR
UBERON:0010412epididymal fat pad
  • MmusDv:0000097late adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:000005410 weeks (mouse)
1.82e4
  • 1.82e4
  • 1.91e4
  • 2.15e4
56.07409
  • 56.07409
  • 53.77832
  • 48.18720
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
  • 1.85e4
  • 1.88e4
  • 2.14e4
  • 2.37e4
  • 2.45e4
  • 2.53e4
55.95753
  • 55.95753
  • 55.30200
  • 54.61746
  • 48.36871
  • 42.69925
  • 40.75654
  • 38.97125
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001690ear
  • MmusDv:00000622 month-old stage (mouse)
1.82e4
  • 1.82e4
55.95094
  • 55.95094
AEIR
  • AEIR
UBERON:0008971left colon
  • UBERON:0000104life cycle
1.85e4
  • 1.85e4
55.25756
  • 55.25756
AEIR
  • AEIR
UBERON:0001911mammary gland
  • MmusDv:00000484 weeks (mouse)
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000517 weeks (mouse)
1.88e4
  • 1.88e4
  • 1.93e4
  • 2.37e4
  • 2.49e4
  • 2.49e4
54.65490
  • 54.65490
  • 53.47945
  • 42.66475
  • 39.95700
  • 39.86499
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
1.88e4
  • 1.88e4
  • 1.93e4
  • 1.97e4
54.65135
  • 54.65135
  • 53.47680
  • 52.55439
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:000005410 weeks (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00000539 weeks (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000097late adult stage
  • MmusDv:00000622 month-old stage (mouse)
1.89e4
  • 1.89e4
  • 2.09e4
  • 2.25e4
  • 2.27e4
  • 2.38e4
  • 2.40e4
  • 2.41e4
  • 2.48e4
  • 2.48e4
  • 2.52e4
  • 2.54e4
54.27830
  • 54.27830
  • 49.45280
  • 45.76062
  • 45.10920
  • 42.42900
  • 42.12723
  • 41.90920
  • 40.17479
  • 40.11560
  • 39.27347
  • 38.79133
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • MmusDv:0000097late adult stage
  • MmusDv:0000075middle aged stage (mouse)
  • UBERON:0000104life cycle
1.91e4
  • 1.91e4
  • 2.01e4
  • 2.29e4
53.80212
  • 53.80212
  • 51.52791
  • 44.67508
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003534tail skin
  • MmusDv:0000061early adult stage
1.93e4
  • 1.93e4
53.44447
  • 53.44447
AEIR
  • AEIR
UBERON:0000947aorta
  • MmusDv:00000506 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000097late adult stage
  • UBERON:0000113post-juvenile adult stage
1.95e4
  • 1.95e4
  • 2.12e4
  • 2.36e4
  • 2.42e4
52.82750
  • 52.82750
  • 48.80548
  • 43.02472
  • 41.66386
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • MmusDv:00000495 weeks (mouse)
  • MmusDv:00000473 weeks (mouse)
  • MmusDv:00000517 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.96e4
  • 1.96e4
  • 2.02e4
  • 2.05e4
  • 2.07e4
  • 2.23e4
52.71970
  • 52.71970
  • 51.19551
  • 50.48551
  • 50.08636
  • 46.15082
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000081metanephros
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
1.96e4
  • 1.96e4
  • 2.38e4
52.64599
  • 52.64599
  • 42.57332
AEIR
  • AEIR
  • AEIR
UBERON:0001459skin of external ear
  • MmusDv:0000061early adult stage
1.97e4
  • 1.97e4
52.43870
  • 52.43870
AEIR
  • AEIR
UBERON:0009953post-embryonic organism
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
52.35922
  • 52.35922
AEIR
  • AEIR
UBERON:0000995uterus
  • MmusDv:0000061early adult stage
  • MmusDv:00000506 weeks (mouse)
2.06e4
  • 2.06e4
  • 2.49e4
50.34761
  • 50.34761
  • 39.92685
AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000024Theiler stage 17 (mouse)
2.06e4
  • 2.06e4
50.19891
  • 50.19891
AEIR
  • AEIR
UBERON:0000358blastocyst
  • UBERON:0000108blastula stage
  • MmusDv:0000008Theiler stage 04 (mouse)
2.10e4
  • 2.10e4
  • 2.18e4
49.20495
  • 49.20495
  • 47.36915
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
2.12e4
  • 2.12e4
  • 2.14e4
48.82117
  • 48.82117
  • 48.44783
AEIR
  • AEIR
  • AEIR
UBERON:0002282stria vascularis of cochlear duct
  • MmusDv:00000451 week (mouse)
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
  • 2.47e4
46.92438
  • 46.92438
  • 40.48486
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
2.27e4
  • 2.27e4
  • 2.58e4
45.15541
  • 45.15541
  • 37.66869
AEIR
  • AEIR
  • AEIR
UBERON:0003220metanephric mesenchyme
  • MmusDv:0000026Theiler stage 19 (mouse)
2.32e4
  • 2.32e4
44.00109
  • 44.00109
AEIR
  • AEIR
UBERON:0005151metanephric proximal tubule
  • MmusDv:0000032Theiler stage 23 (mouse)
2.33e4
  • 2.33e4
43.80502
  • 43.80502
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • MmusDv:0000033Theiler stage 24 (mouse)
2.42e4
  • 2.42e4
41.66144
  • 41.66144
AEIR
  • AEIR
UBERON:0001017central nervous system
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
2.43e4
  • 2.43e4
  • 2.60e4
41.40171
  • 41.40171
  • 37.18098
AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • UBERON:0007221neonate stage
  • MmusDv:0000029Theiler stage 22 (mouse)
2.46e4
  • 2.46e4
  • 2.47e4
40.69754
  • 40.69754
  • 40.29517
AEIR
  • AEIR
  • AEIR
UBERON:0001844cochlea
  • MmusDv:00000539 weeks (mouse)
2.50e4
  • 2.50e4
39.55285
  • 39.55285
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

CCDSCCDS49963 (CCDS49963.1)
EMBLAC154378, CT033750, HQ704391
EnsemblENSMUSG00000051977 (Prdm9)
MGIMGI:2384854 (Prdm9)
Uniprot/SPTREMBLE9Q4V2, E9Q4V2_MOUSE
Uniprot/SWISSPROTPRDM9_MOUSE, Q96EQ9

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