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M. musculus Gene: Rft1 - ENSMUSG00000052395 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000052395
NameRft1
DescriptionRFT1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:3607791]
OrganismMus musculus (mouse)
Synonym(s)b2run9, d930025h04
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • MmusDv:00000776 month-old stage (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
4.59e3
  • 4.59e3
  • 5.05e3
  • 5.86e3
  • 6.04e3
  • 6.26e3
  • 6.82e3
  • 8.35e3
  • 8.85e3
  • 9.34e3
  • 9.46e3
  • 9.48e3
88.99
  • 88.99
  • 87.88
  • 85.95
  • 85.52
  • 84.97
  • 83.64
  • 79.97
  • 78.77
  • 77.59
  • 77.29
  • 77.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000066fully formed stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000032Theiler stage 23 (mouse)
5.04e3
  • 5.04e3
  • 8.25e3
  • 8.52e3
  • 8.60e3
87.91
  • 87.91
  • 80.20
  • 79.56
  • 79.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004134proximal tubule
  • MmusDv:00000622 month-old stage (mouse)
5.45e3
  • 5.45e3
86.92
  • 86.92
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
5.46e3
  • 5.46e3
86.90
  • 86.90
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007221neonate stage
  • MmusDv:0000061early adult stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
6.04e3
  • 6.04e3
  • 8.72e3
  • 8.74e3
  • 8.75e3
  • 8.79e3
  • 8.80e3
  • 8.89e3
  • 9.46e3
  • 9.79e3
  • 9.96e3
85.52
  • 85.52
  • 79.08
  • 79.02
  • 79.00
  • 78.91
  • 78.89
  • 78.66
  • 77.29
  • 76.50
  • 76.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
6.06e3
  • 6.06e3
  • 6.17e3
  • 6.19e3
  • 8.32e3
  • 8.60e3
85.46
  • 85.46
  • 85.18
  • 85.15
  • 80.03
  • 79.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
85.45
  • 85.45
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
6.16e3
  • 6.16e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.42e3
  • 6.42e3
84.60
  • 84.60
AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
6.77e3
  • 6.77e3
83.76
  • 83.76
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
6.98e3
  • 6.98e3
83.26
  • 83.26
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
7.07e3
  • 7.07e3
  • 8.90e3
83.05
  • 83.05
  • 78.64
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
7.10e3
  • 7.10e3
82.96
  • 82.96
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000066fully formed stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
7.18e3
  • 7.18e3
  • 7.93e3
  • 7.96e3
  • 8.65e3
  • 9.43e3
82.78
  • 82.78
  • 80.97
  • 80.91
  • 79.24
  • 77.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000112sexually immature stage
7.28e3
  • 7.28e3
  • 7.38e3
  • 8.01e3
  • 1.00e4
82.53
  • 82.53
  • 82.29
  • 80.79
  • 75.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
7.29e3
  • 7.29e3
82.51
  • 82.51
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.34e3
  • 7.34e3
82.39
  • 82.39
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000068embryo stage
7.40e3
  • 7.40e3
  • 7.57e3
  • 7.64e3
  • 8.26e3
  • 2.09e4
82.25
  • 82.25
  • 81.83
  • 81.66
  • 80.18
  • 49.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
7.44e3
  • 7.44e3
82.15
  • 82.15
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
7.45e3
  • 7.45e3
82.14
  • 82.14
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
7.55e3
  • 7.55e3
  • 8.02e3
  • 8.08e3
  • 8.67e3
81.87
  • 81.87
  • 80.76
  • 80.61
  • 79.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
7.57e3
  • 7.57e3
  • 7.69e3
  • 7.74e3
  • 7.92e3
81.83
  • 81.83
  • 81.54
  • 81.44
  • 80.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
7.58e3
  • 7.58e3
  • 8.72e3
  • 9.00e3
  • 1.02e4
  • 1.03e4
  • 1.09e4
81.81
  • 81.81
  • 79.07
  • 78.40
  • 75.50
  • 75.21
  • 73.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
7.66e3
  • 7.66e3
  • 9.40e3
  • 1.09e4
  • 1.16e4
  • 1.21e4
  • 1.26e4
  • 1.78e4
81.63
  • 81.63
  • 77.45
  • 73.94
  • 72.09
  • 70.96
  • 69.74
  • 57.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
7.75e3
  • 7.75e3
  • 9.03e3
81.41
  • 81.41
  • 78.34
AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
7.78e3
  • 7.78e3
81.33
  • 81.33
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
7.86e3
  • 7.86e3
  • 7.89e3
81.14
  • 81.14
  • 81.06
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
7.93e3
  • 7.93e3
  • 8.44e3
  • 9.20e3
80.97
  • 80.97
  • 79.75
  • 77.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
8.03e3
  • 8.03e3
  • 8.28e3
  • 9.10e3
  • 9.79e3
  • 1.05e4
  • 1.08e4
80.73
  • 80.73
  • 80.14
  • 78.16
  • 76.52
  • 74.72
  • 74.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
8.11e3
  • 8.11e3
80.54
  • 80.54
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
8.21e3
  • 8.21e3
80.30
  • 80.30
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
8.29e3
  • 8.29e3
  • 8.77e3
  • 9.01e3
80.11
  • 80.11
  • 78.95
  • 78.39
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
8.32e3
  • 8.32e3
80.03
  • 80.03
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
8.37e3
  • 8.37e3
  • 9.25e3
  • 9.97e3
  • 1.02e4
  • 1.04e4
  • 1.09e4
79.91
  • 79.91
  • 77.81
  • 76.07
  • 75.60
  • 75.14
  • 73.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
8.40e3
  • 8.40e3
  • 8.42e3
  • 8.73e3
79.85
  • 79.85
  • 79.80
  • 79.05
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
8.49e3
  • 8.49e3
79.64
  • 79.64
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
8.49e3
  • 8.49e3
79.64
  • 79.64
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
8.49e3
  • 8.49e3
79.63
  • 79.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
8.60e3
  • 8.60e3
  • 1.02e4
  • 1.06e4
79.36
  • 79.36
  • 75.42
  • 74.50
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
8.75e3
  • 8.75e3
79.01
  • 79.01
AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
78.92
  • 78.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0007221neonate stage
8.79e3
  • 8.79e3
  • 9.01e3
  • 1.16e4
  • 1.98e4
78.91
  • 78.91
  • 78.39
  • 72.12
  • 52.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
8.96e3
  • 8.96e3
78.51
  • 78.51
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.96e3
  • 8.96e3
78.50
  • 78.50
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
78.44
  • 78.44
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
9.15e3
  • 9.15e3
78.04
  • 78.04
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
9.21e3
  • 9.21e3
77.89
  • 77.89
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
9.23e3
  • 9.23e3
  • 1.07e4
77.86
  • 77.86
  • 74.30
AEIR
  • AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
9.25e3
  • 9.25e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.26e3
  • 9.26e3
77.79
  • 77.79
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
9.26e3
  • 9.26e3
  • 9.90e3
77.77
  • 77.77
  • 76.25
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000066fully formed stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
9.44e3
  • 9.44e3
  • 9.67e3
  • 9.85e3
  • 1.10e4
77.35
  • 77.35
  • 76.79
  • 76.36
  • 73.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
9.49e3
  • 9.49e3
77.22
  • 77.22
AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
9.52e3
  • 9.52e3
  • 1.03e4
  • 1.08e4
77.15
  • 77.15
  • 75.39
  • 74.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
9.54e3
  • 9.54e3
  • 1.05e4
  • 1.07e4
77.11
  • 77.11
  • 74.69
  • 74.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.63e3
  • 9.63e3
76.88
  • 76.88
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
9.76e3
  • 9.76e3
76.59
  • 76.59
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
9.79e3
  • 9.79e3
76.51
  • 76.51
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
9.85e3
  • 9.85e3
76.36
  • 76.36
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.95e3
  • 9.95e3
76.13
  • 76.13
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.00e4
  • 1.00e4
75.89
  • 75.89
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
75.49
  • 75.49
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
1.02e4
  • 1.02e4
75.43
  • 75.43
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
75.40
  • 75.40
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
1.04e4
  • 1.04e4
75.03
  • 75.03
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
  • 1.18e4
  • 1.28e4
74.54
  • 74.54
  • 71.72
  • 69.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
74.50
  • 74.50
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.13e4
  • 1.13e4
72.92
  • 72.92
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
72.59
  • 72.59
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:000005511 weeks (mouse)
1.16e4
  • 1.16e4
  • 1.28e4
  • 1.32e4
  • 1.44e4
72.05
  • 72.05
  • 69.35
  • 68.31
  • 65.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000052395.

Cross-references

CCDSCCDS26896 (CCDS26896.1)
EnsemblENSMUSG00000052395 (Rft1)
MGIMGI:3607791 (Rft1)
EMBLAC154436, AC154646, AK086390, BC116368, BC116369, BC141275
Uniprot/SPTREMBLD6RFD6, D6RFD6_MOUSE, E9Q0V1, E9Q0V1_MOUSE
Uniprot/SWISSPROTQ8C3B8, RFT1_MOUSE

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