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M. musculus Gene: Tceal5 - ENSMUSG00000054034 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000054034
NameTceal5
Descriptiontranscription elongation factor A (SII)-like 5 [Source:MGI Symbol;Acc:MGI:3036236]
OrganismMus musculus (mouse)
Synonym(s)6430401a05rik, q497r6
Orthologs(s)28 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
414
  • 414
  • 1.11e3
  • 1.35e3
99.01
  • 99.01
  • 97.34
  • 96.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000066fully formed stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
500
  • 500
  • 1.09e3
  • 1.11e3
  • 2.00e3
  • 1.04e4
98.80
  • 98.80
  • 97.39
  • 97.33
  • 95.20
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000104life cycle
538
  • 538
  • 884
  • 1.31e3
  • 1.87e3
  • 2.21e3
  • 2.04e4
98.71
  • 98.71
  • 97.88
  • 96.85
  • 95.51
  • 94.69
  • 51.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000451 week (mouse)
626
  • 626
  • 1.77e4
  • 2.08e4
98.50
  • 98.50
  • 57.48
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
687
  • 687
98.35
  • 98.35
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
999
  • 999
  • 1.36e3
  • 1.64e4
97.61
  • 97.61
  • 96.74
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
97.54
  • 97.54
AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
1.14e3
  • 1.14e3
97.28
  • 97.28
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.59e3
  • 1.59e3
96.20
  • 96.20
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.76e3
  • 1.76e3
95.78
  • 95.78
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.77e3
  • 1.77e3
95.75
  • 95.75
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000061early adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
1.83e3
  • 1.83e3
  • 2.13e3
  • 2.42e3
95.61
  • 95.61
  • 94.90
  • 94.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.97e3
  • 1.97e3
95.28
  • 95.28
AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
2.05e3
  • 2.05e3
95.08
  • 95.08
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.51e3
  • 2.51e3
93.98
  • 93.98
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.60e3
  • 2.60e3
  • 2.66e3
93.77
  • 93.77
  • 93.63
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.93e3
  • 2.93e3
92.98
  • 92.98
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
3.29e3
  • 3.29e3
92.10
  • 92.10
AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
4.59e3
  • 4.59e3
  • 6.77e3
  • 1.34e4
88.99
  • 88.99
  • 83.76
  • 67.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
4.69e3
  • 4.69e3
88.74
  • 88.74
AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • UBERON:0007221neonate stage
4.72e3
  • 4.72e3
  • 5.00e3
  • 6.12e3
  • 1.13e4
  • 1.26e4
  • 1.43e4
88.67
  • 88.67
  • 87.99
  • 85.31
  • 72.81
  • 69.87
  • 65.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
5.15e3
  • 5.15e3
  • 5.27e3
  • 7.36e3
  • 1.08e4
  • 1.20e4
  • 1.25e4
87.64
  • 87.64
  • 87.37
  • 82.35
  • 74.14
  • 71.16
  • 70.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
5.63e3
  • 5.63e3
  • 6.02e3
  • 7.68e3
  • 1.92e4
  • 1.95e4
  • 2.34e4
  • 2.64e4
  • 2.76e4
  • 3.10e4
  • 3.21e4
86.50
  • 86.50
  • 85.56
  • 81.57
  • 53.88
  • 53.19
  • 43.91
  • 36.66
  • 33.86
  • 25.72
  • 23.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
5.99e3
  • 5.99e3
  • 7.56e3
  • 7.95e3
  • 1.06e4
85.62
  • 85.62
  • 81.85
  • 80.91
  • 74.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
6.51e3
  • 6.51e3
  • 6.54e3
  • 6.61e3
  • 8.57e3
  • 1.06e4
  • 1.41e4
  • 1.52e4
  • 1.54e4
  • 2.09e4
  • 2.57e4
84.38
  • 84.38
  • 84.31
  • 84.14
  • 79.45
  • 74.54
  • 66.21
  • 63.45
  • 63.02
  • 49.94
  • 38.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
6.78e3
  • 6.78e3
83.73
  • 83.73
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
7.29e3
  • 7.29e3
  • 7.73e3
  • 8.61e3
  • 9.94e3
  • 1.11e4
  • 2.05e4
82.50
  • 82.50
  • 81.45
  • 79.33
  • 76.15
  • 73.40
  • 50.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
7.54e3
  • 7.54e3
  • 8.54e3
  • 8.63e3
81.92
  • 81.92
  • 79.51
  • 79.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
7.59e3
  • 7.59e3
81.79
  • 81.79
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
8.28e3
  • 8.28e3
  • 8.62e3
  • 8.72e3
  • 9.43e3
  • 1.01e4
80.13
  • 80.13
  • 79.33
  • 79.07
  • 77.37
  • 75.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
8.41e3
  • 8.41e3
  • 9.03e3
  • 1.04e4
  • 1.30e4
79.83
  • 79.83
  • 78.33
  • 75.02
  • 68.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
8.99e3
  • 8.99e3
  • 9.58e3
  • 1.08e4
  • 1.23e4
78.43
  • 78.43
  • 77.01
  • 74.13
  • 70.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
9.28e3
  • 9.28e3
77.73
  • 77.73
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
9.39e3
  • 9.39e3
  • 1.12e4
77.47
  • 77.47
  • 73.16
AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
9.49e3
  • 9.49e3
77.22
  • 77.22
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
9.79e3
  • 9.79e3
76.52
  • 76.52
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.01e4
  • 1.01e4
  • 1.18e4
  • 1.19e4
75.77
  • 75.77
  • 71.75
  • 71.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
  • 1.12e4
  • 1.31e4
73.89
  • 73.89
  • 73.10
  • 68.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
  • 1.67e4
73.43
  • 73.43
  • 59.82
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000066fully formed stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
  • 1.13e4
  • 1.15e4
  • 1.60e4
73.22
  • 73.22
  • 72.77
  • 72.47
  • 61.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
73.07
  • 73.07
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
  • 1.31e4
  • 1.43e4
  • 1.59e4
72.69
  • 72.69
  • 68.46
  • 65.63
  • 61.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.20e4
  • 1.20e4
  • 1.23e4
  • 1.70e4
  • 1.76e4
  • 2.04e4
71.15
  • 71.15
  • 70.50
  • 59.29
  • 57.70
  • 51.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.29e4
  • 1.29e4
69.15
  • 69.15
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.30e4
  • 1.30e4
  • 1.32e4
68.87
  • 68.87
  • 68.39
AEIR
  • AEIR
  • AEIR
MA:0000187neocortex region (mouse)
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
68.64
  • 68.64
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.36e4
  • 1.36e4
67.37
  • 67.37
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
67.32
  • 67.32
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.70e4
67.15
  • 67.15
  • 59.19
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
66.08
  • 66.08
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
65.31
  • 65.31
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
64.11
  • 64.11
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
1.50e4
  • 1.50e4
63.94
  • 63.94
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
63.39
  • 63.39
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
63.35
  • 63.35
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
62.70
  • 62.70
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.69e4
  • 1.69e4
59.48
  • 59.48
AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
59.28
  • 59.28
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.72e4
  • 1.72e4
  • 1.90e4
  • 2.13e4
58.76
  • 58.76
  • 54.44
  • 48.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
1.74e4
  • 1.74e4
  • 1.95e4
58.31
  • 58.31
  • 53.24
AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
57.42
  • 57.42
AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
1.83e4
  • 1.83e4
56.02
  • 56.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.94e4
  • 1.94e4
  • 2.00e4
  • 2.04e4
53.46
  • 53.46
  • 52.00
  • 51.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.95e4
  • 1.95e4
  • 2.52e4
  • 3.15e4
53.21
  • 53.21
  • 39.64
  • 24.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.07e4
  • 2.07e4
50.23
  • 50.23
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
2.40e4
  • 2.40e4
42.37
  • 42.37
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.54e4
  • 2.54e4
39.12
  • 39.12
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
2.87e4
  • 2.87e4
31.02
  • 31.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species4 genesCompare expression
Glires3 species6 genesCompare expression
Euarchontoglires6 species14 genesCompare expression
Boreoeutheria11 species28 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000054034.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Rodentia2 genesCompare expression

Paralogy information comes from OMA : ENSMUSG00000054034.

Cross-references

CCDSCCDS30416 (CCDS30416.1)
EnsemblENSMUSG00000054034 (Tceal5)
MGIMGI:3036236 (Tceal5)
EMBLAK032140, AL772180, BC100415, BC115460, BC115461
Uniprot/SPTREMBLA2AJS1, A2AJS1_MOUSE, A2AJS2, A2AJS2_MOUSE, Q14C38, Q14C38_MOUSE
Uniprot/SWISSPROTQ8CCT4, TCAL5_MOUSE

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