M. musculus Gene: Bsx - ENSMUSG00000054360 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000054360
NameBsx
Descriptionbrain specific homeobox [Source:MGI Symbol;Acc:MGI:2669849]
OrganismMus musculus (mouse)
Synonym(s)bsx1a, bsx1b, q3sxb1
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005215kidney interstitium
  • MmusDv:0000032Theiler stage 23 (mouse)
4.63e3
  • 4.63e3
88.89
  • 88.89
AEIR
  • AEIR
UBERON:0012238ureteric bud trunk
  • MmusDv:0000032Theiler stage 23 (mouse)
4.81e3
  • 4.81e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0005107metanephric cap
  • MmusDv:0000032Theiler stage 23 (mouse)
5.21e3
  • 5.21e3
87.50
  • 87.50
AEIR
  • AEIR
EMAPA:28527late tubule (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
5.56e3
  • 5.56e3
86.66
  • 86.66
AEIR
  • AEIR
UBERON:0003517kidney blood vessel
  • MmusDv:0000032Theiler stage 23 (mouse)
5.56e3
  • 5.56e3
86.66
  • 86.66
AEIR
  • AEIR
EMAPA:28500early tubule (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
6.13e3
  • 6.13e3
85.29
  • 85.29
AEIR
  • AEIR
UBERON:0006364ureteric bud tip
  • MmusDv:0000032Theiler stage 23 (mouse)
6.51e3
  • 6.51e3
84.37
  • 84.37
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
  • UBERON:0007221neonate stage
1.13e4
  • 1.13e4
  • 1.14e4
72.97
  • 72.97
  • 72.72
AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • UBERON:0007221neonate stage
1.25e4
  • 1.25e4
  • 1.35e4
  • 1.38e4
  • 1.85e4
  • 1.87e4
  • 2.40e4
70.04
  • 70.04
  • 67.50
  • 66.93
  • 55.63
  • 55.08
  • 42.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.47e4
  • 1.47e4
  • 1.54e4
  • 1.70e4
  • 1.76e4
  • 2.08e4
  • 2.10e4
64.69
  • 64.69
  • 63.05
  • 59.32
  • 57.79
  • 50.09
  • 49.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000633 month-old stage (mouse)
1.58e4
  • 1.58e4
  • 2.30e4
  • 2.62e4
  • 3.11e4
62.05
  • 62.05
  • 44.72
  • 37.10
  • 25.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.77e4
  • 1.77e4
57.61
  • 57.61
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
2.11e4
  • 2.11e4
  • 3.11e4
49.30
  • 49.30
  • 25.45
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
47.01
  • 47.01
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
46.52
  • 46.52
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.27e4
  • 2.27e4
45.45
  • 45.45
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
2.35e4
  • 2.35e4
43.56
  • 43.56
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
2.45e4
  • 2.45e4
41.32
  • 41.32
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000028Theiler stage 21 (mouse)
2.45e4
  • 2.45e4
41.27
  • 41.27
AEIR
  • AEIR
UBERON:0004134proximal tubule
  • MmusDv:00000622 month-old stage (mouse)
2.48e4
  • 2.48e4
40.60
  • 40.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.54e4
  • 2.54e4
  • 2.81e4
  • 2.86e4
39.00
  • 39.00
  • 32.69
  • 31.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.63e4
  • 2.63e4
36.99
  • 36.99
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
2.67e4
  • 2.67e4
35.86
  • 35.86
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
2.77e4
  • 2.77e4
  • 3.02e4
  • 3.68e4
33.54
  • 33.54
  • 27.56
  • 11.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
2.79e4
  • 2.79e4
33.03
  • 33.03
AEIR
  • AEIR
UBERON:0002370thymus
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.84e4
  • 2.84e4
  • 3.15e4
  • 3.75e4
31.83
  • 31.83
  • 24.46
  • 9.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.86e4
  • 2.86e4
  • 3.09e4
31.30
  • 31.30
  • 25.96
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
2.93e4
  • 2.93e4
  • 3.18e4
  • 3.30e4
29.58
  • 29.58
  • 23.58
  • 20.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
3.00e4
  • 3.00e4
28.06
  • 28.06
AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
3.02e4
  • 3.02e4
27.42
  • 27.42
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.08e4
  • 3.08e4
26.11
  • 26.11
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
3.11e4
  • 3.11e4
  • 3.40e4
25.45
  • 25.45
  • 18.44
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
3.25e4
  • 3.25e4
22.13
  • 22.13
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
3.36e4
  • 3.36e4
  • 3.58e4
19.45
  • 19.45
  • 14.16
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.40e4
  • 3.40e4
18.29
  • 18.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000054360.

Cross-references

CCDSCCDS23084 (CCDS23084.1)
EnsemblENSMUSG00000054360 (Bsx)
MGIMGI:2669849 (Bsx)
EMBLAY233396, BC104386, BC104387
Uniprot/SWISSPROTBSH_MOUSE, Q810B3

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