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M. musculus Gene: Nt5c1a - ENSMUSG00000054958 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000054958
NameNt5c1a
Description5'-nucleotidase, cytosolic IA [Source:MGI Symbol;Acc:MGI:2155700]
OrganismMus musculus (mouse)
Synonym(s)b2rvq9, cn1a, gm49, loc230718
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
4.25e3
  • 4.25e3
  • 6.24e3
89.79
  • 89.79
  • 85.02
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000061early adult stage
4.27e3
  • 4.27e3
  • 4.65e3
  • 3.30e4
89.74
  • 89.74
  • 88.85
  • 20.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
5.16e3
  • 5.16e3
87.62
  • 87.62
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:0000061early adult stage
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
6.38e3
  • 6.38e3
  • 8.08e3
  • 8.10e3
  • 8.83e3
  • 9.66e3
  • 1.47e4
  • 1.48e4
  • 1.55e4
  • 1.87e4
  • 1.93e4
84.69
  • 84.69
  • 80.60
  • 80.58
  • 78.80
  • 76.83
  • 64.83
  • 64.55
  • 62.89
  • 55.04
  • 53.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.61e3
  • 6.61e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0002360meninx
  • MmusDv:0000029Theiler stage 22 (mouse)
7.58e3
  • 7.58e3
81.82
  • 81.82
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
80.16
  • 80.16
AEIR
  • AEIR
UBERON:0002102forelimb
  • MmusDv:0000029Theiler stage 22 (mouse)
8.34e3
  • 8.34e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002103hindlimb
  • MmusDv:0000029Theiler stage 22 (mouse)
8.34e3
  • 8.34e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
8.66e3
  • 8.66e3
  • 1.10e4
  • 1.47e4
79.21
  • 79.21
  • 73.71
  • 64.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
9.12e3
  • 9.12e3
  • 1.76e4
  • 1.77e4
  • 2.19e4
78.12
  • 78.12
  • 57.79
  • 57.64
  • 47.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
9.53e3
  • 9.53e3
77.12
  • 77.12
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
  • 1.03e4
  • 1.06e4
  • 1.13e4
75.44
  • 75.44
  • 75.40
  • 74.59
  • 72.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.09e4
  • 1.09e4
73.85
  • 73.85
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
72.98
  • 72.98
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
1.23e4
  • 1.23e4
  • 1.27e4
  • 2.04e4
  • 2.07e4
  • 3.11e4
70.51
  • 70.51
  • 69.41
  • 51.04
  • 50.24
  • 25.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
70.12
  • 70.12
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.26e4
  • 1.26e4
69.67
  • 69.67
AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
68.56
  • 68.56
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
68.41
  • 68.41
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
65.15
  • 65.15
AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
62.81
  • 62.81
AEIR
  • AEIR
UBERON:0001456face
  • MmusDv:0000029Theiler stage 22 (mouse)
1.56e4
  • 1.56e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
62.32
  • 62.32
AEIR
  • AEIR
UBERON:0001890forebrain
  • UBERON:0007221neonate stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.62e4
  • 1.62e4
  • 2.33e4
  • 2.96e4
61.22
  • 61.22
  • 44.07
  • 29.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
60.45
  • 60.45
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
59.92
  • 59.92
AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
1.74e4
  • 1.74e4
  • 2.33e4
58.31
  • 58.31
  • 44.08
AEIR
  • AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.77e4
  • 1.77e4
57.59
  • 57.59
AEIR
  • AEIR
UBERON:0002028hindbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
1.77e4
  • 1.77e4
  • 2.19e4
57.55
  • 57.55
  • 47.35
AEIR
  • AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.78e4
  • 1.78e4
57.35
  • 57.35
AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
1.88e4
  • 1.88e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
  • 2.19e4
53.51
  • 53.51
  • 47.35
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.02e4
  • 2.02e4
51.50
  • 51.50
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.03e4
  • 2.03e4
51.22
  • 51.22
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
2.03e4
  • 2.03e4
51.19
  • 51.19
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
2.04e4
  • 2.04e4
  • 2.11e4
51.16
  • 51.16
  • 49.29
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000066fully formed stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
2.04e4
  • 2.04e4
  • 2.32e4
  • 2.41e4
  • 2.43e4
  • 2.99e4
51.11
  • 51.11
  • 44.35
  • 42.22
  • 41.70
  • 28.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
2.14e4
  • 2.14e4
48.58
  • 48.58
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
2.19e4
  • 2.19e4
  • 3.07e4
47.46
  • 47.46
  • 26.27
AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.36e4
  • 2.36e4
43.37
  • 43.37
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000032Theiler stage 23 (mouse)
2.48e4
  • 2.48e4
40.53
  • 40.53
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.48e4
  • 2.48e4
40.42
  • 40.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.49e4
  • 2.49e4
  • 2.65e4
40.25
  • 40.25
  • 36.47
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.49e4
  • 2.49e4
  • 2.92e4
40.24
  • 40.24
  • 29.85
AEIR
  • AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
2.49e4
  • 2.49e4
40.22
  • 40.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.76e4
  • 2.76e4
  • 2.78e4
33.74
  • 33.74
  • 33.29
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.81e4
  • 2.81e4
32.55
  • 32.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
2.89e4
  • 2.89e4
  • 3.13e4
  • 3.18e4
30.66
  • 30.66
  • 24.82
  • 23.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
2.90e4
  • 2.90e4
30.40
  • 30.40
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
2.92e4
  • 2.92e4
29.95
  • 29.95
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000026Theiler stage 19 (mouse)
2.92e4
  • 2.92e4
29.87
  • 29.87
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
3.14e4
  • 3.14e4
  • 3.17e4
  • 3.39e4
24.59
  • 24.59
  • 24.00
  • 18.74
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000054958.

Cross-references

CCDSCCDS38871 (CCDS38871.1)
EnsemblENSMUSG00000054958 (Nt5c1a)
MGIMGI:2155700 (Nt5c1a)
EMBLAL606934, BC147308, BC147309, BC147730, BC147733, CH466552
Uniprot/SWISSPROT5NT1A_MOUSE, A3KFX0

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