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M. musculus Gene: Vmn1r228 - ENSMUSG00000060245 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000060245
NameVmn1r228
Descriptionvomeronasal 1 receptor 228 [Source:MGI Symbol;Acc:MGI:2159624]
OrganismMus musculus (mouse)
Synonym(s)v1rd1, v1re3, v1re3gn, vldr1
Orthologs(s)21 orthologs
Paralog(s)14 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
2.44e4
  • 2.44e4
  • 3.42e4
  • 3.47e4
  • 3.57e4
41.43
  • 41.43
  • 17.94
  • 16.82
  • 14.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
3.26e4
  • 3.26e4
21.86
  • 21.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species7 genesCompare expression
Glires3 species9 genesCompare expression
Boreoeutheria7 species21 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000060245.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Rodentia14 genesCompare expression

Paralogy information comes from OMA : ENSMUSG00000060245.

Cross-references

CCDSCCDS28427 (CCDS28427.1)
EnsemblENSMUSG00000060245 (Vmn1r228)
MGIMGI:2159624 (Vmn1r228)
EMBLAC107868, AF394950, AY065503, CH466644
Uniprot/SPTREMBLQ8R2A7, Q8R2A7_MOUSE

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