M. musculus Gene: T - ENSMUSG00000062327 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000062327
NameT
Descriptionbrachyury [Source:MGI Symbol;Acc:MGI:98472]
OrganismMus musculus (mouse)
Synonym(s)bra, brachyury(t), cou, d17mit170, low, lr, me75, t1, tl2, tl3
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
125
  • 125
  • 4.17e3
  • 8.34e3
99.70
  • 99.70
  • 90.00
  • 80.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
520
  • 520
  • 1.39e4
  • 1.82e4
98.75
  • 98.75
  • 66.66
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004341primitive streak
  • UBERON:0000068embryo stage
  • UBERON:0000110neurula stage
  • MmusDv:0000015Theiler stage 10 (mouse)
  • MmusDv:0000014Theiler stage 09 (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000019Theiler stage 12 (mouse)
692
  • 692
  • 1.10e3
  • 1.49e3
  • 1.74e3
  • 2.61e3
  • 8.34e3
98.34
  • 98.34
  • 97.37
  • 96.43
  • 95.83
  • 93.75
  • 80.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • UBERON:0000110neurula stage
  • MmusDv:0000015Theiler stage 10 (mouse)
850
  • 850
  • 5.61e3
97.96
  • 97.96
  • 86.55
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000110neurula stage
  • MmusDv:0000014Theiler stage 09 (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000012Theiler stage 08 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000009Theiler stage 05 (mouse)
  • MmusDv:0000005Theiler stage 02 (mouse)
  • MmusDv:0000015Theiler stage 10 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.40e3
  • 1.40e3
  • 2.53e3
  • 3.21e3
  • 4.17e3
  • 9.72e3
  • 1.39e4
  • 1.40e4
  • 1.63e4
  • 1.78e4
  • 1.96e4
  • 2.16e4
  • 2.20e4
  • 2.24e4
  • 2.52e4
  • 2.55e4
  • 2.57e4
96.63
  • 96.63
  • 93.94
  • 92.31
  • 90.00
  • 76.68
  • 66.56
  • 66.45
  • 60.95
  • 57.32
  • 52.88
  • 48.18
  • 47.19
  • 46.29
  • 39.41
  • 38.84
  • 38.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006267notochordal plate
  • UBERON:0000110neurula stage
  • MmusDv:0000019Theiler stage 12 (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
2.61e3
  • 2.61e3
  • 2.98e3
  • 6.95e3
93.75
  • 93.75
  • 92.86
  • 83.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003062primitive knot
  • UBERON:0000110neurula stage
  • MmusDv:0000020Theiler stage 13 (mouse)
2.61e3
  • 2.61e3
  • 5.21e3
93.75
  • 93.75
  • 87.50
AEIR
  • AEIR
  • AEIR
EMAPA:35961embryo mesenchyme (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
2.98e3
  • 2.98e3
  • 6.95e3
  • 8.34e3
92.86
  • 92.86
  • 83.33
  • 80.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000924ectoderm
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000015Theiler stage 10 (mouse)
  • MmusDv:0000014Theiler stage 09 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
3.47e3
  • 3.47e3
  • 9.26e3
  • 1.14e4
  • 1.39e4
91.67
  • 91.67
  • 77.78
  • 72.72
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006268notochordal process
  • UBERON:0000110neurula stage
3.47e3
  • 3.47e3
91.67
  • 91.67
AEIR
  • AEIR
EMAPA:16071embryo mesoderm (mouse)
  • MmusDv:0000015Theiler stage 10 (mouse)
  • MmusDv:0000014Theiler stage 09 (mouse)
  • UBERON:0000110neurula stage
3.47e3
  • 3.47e3
  • 5.21e3
  • 6.58e3
91.67
  • 91.67
  • 87.50
  • 84.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0007221neonate stage
  • MmusDv:0000028Theiler stage 21 (mouse)
3.79e3
  • 3.79e3
  • 2.54e4
90.91
  • 90.91
  • 39.05
AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:0000019Theiler stage 12 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
4.17e3
  • 4.17e3
  • 4.63e3
  • 4.63e3
  • 5.68e3
  • 5.95e3
  • 7.82e3
90.00
  • 90.00
  • 88.89
  • 88.89
  • 86.36
  • 85.71
  • 81.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • MmusDv:0000009Theiler stage 05 (mouse)
5.21e3
  • 5.21e3
87.50
  • 87.50
AEIR
  • AEIR
UBERON:0003599tail connective tissue
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
6.95e3
  • 6.95e3
  • 1.56e4
83.33
  • 83.33
  • 62.50
AEIR
  • AEIR
  • AEIR
UBERON:0005439definitive endoderm
  • MmusDv:0000015Theiler stage 10 (mouse)
1.04e4
  • 1.04e4
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0004340allantois
  • UBERON:0000110neurula stage
1.04e4
  • 1.04e4
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0001334female urethra
  • MmusDv:0000032Theiler stage 23 (mouse)
1.12e4
  • 1.12e4
73.07
  • 73.07
AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
1.12e4
  • 1.12e4
73.07
  • 73.07
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000633 month-old stage (mouse)
1.17e4
  • 1.17e4
  • 2.53e4
71.99
  • 71.99
  • 39.34
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • MmusDv:0000009Theiler stage 05 (mouse)
1.19e4
  • 1.19e4
71.43
  • 71.43
AEIR
  • AEIR
UBERON:0000925endoderm
  • UBERON:0000110neurula stage
1.21e4
  • 1.21e4
71.05
  • 71.05
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
  • 2.46e4
  • 3.50e4
70.82
  • 70.82
  • 40.86
  • 16.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 2.50e4
70.19
  • 70.19
  • 40.07
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.29e4
  • 1.29e4
  • 1.57e4
  • 1.57e4
68.97
  • 68.97
  • 62.40
  • 62.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.31e4
  • 1.31e4
  • 2.15e4
  • 2.58e4
  • 2.72e4
68.54
  • 68.54
  • 48.52
  • 38.17
  • 34.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.36e4
  • 1.36e4
67.34
  • 67.34
AEIR
  • AEIR
EMAPA:32757paraxial mesenchyme (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • MmusDv:0000020Theiler stage 13 (mouse)
1.39e4
  • 1.39e4
  • 1.39e4
66.67
  • 66.67
  • 66.66
AEIR
  • AEIR
  • AEIR
UBERON:0005071posterior neuropore
  • MmusDv:0000022Theiler stage 15 (mouse)
1.39e4
  • 1.39e4
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0001017central nervous system
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • UBERON:0007221neonate stage
1.39e4
  • 1.39e4
  • 1.56e4
  • 1.67e4
  • 2.08e4
  • 2.61e4
66.66
  • 66.66
  • 62.50
  • 59.99
  • 50.00
  • 37.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.40e4
  • 1.40e4
  • 1.47e4
  • 1.50e4
  • 1.75e4
66.29
  • 66.29
  • 64.78
  • 64.13
  • 58.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
1.43e4
  • 1.43e4
  • 1.70e4
65.69
  • 65.69
  • 59.25
AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
1.44e4
  • 1.44e4
  • 1.80e4
  • 2.44e4
65.49
  • 65.49
  • 56.80
  • 41.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.45e4
  • 1.45e4
  • 1.47e4
  • 1.93e4
  • 2.12e4
65.14
  • 65.14
  • 64.69
  • 53.63
  • 49.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001004respiratory system
  • MmusDv:0000029Theiler stage 22 (mouse)
1.46e4
  • 1.46e4
64.99
  • 64.99
AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • MmusDv:0000021Theiler stage 14 (mouse)
1.49e4
  • 1.49e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.50e4
  • 1.50e4
  • 1.57e4
  • 1.75e4
  • 1.83e4
64.10
  • 64.10
  • 62.28
  • 57.93
  • 56.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001008renal system
  • MmusDv:0000029Theiler stage 22 (mouse)
1.52e4
  • 1.52e4
63.63
  • 63.63
AEIR
  • AEIR
UBERON:0005294gonadal ridge
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.52e4
  • 1.52e4
  • 1.73e4
  • 1.74e4
63.58
  • 63.58
  • 58.38
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
1.53e4
  • 1.53e4
  • 1.82e4
  • 1.86e4
  • 1.92e4
  • 2.02e4
  • 2.29e4
63.38
  • 63.38
  • 56.21
  • 55.46
  • 53.90
  • 51.57
  • 44.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001690ear
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000021Theiler stage 14 (mouse)
  • UBERON:0000111organogenesis stage
  • UBERON:0000068embryo stage
1.56e4
  • 1.56e4
  • 1.90e4
  • 2.21e4
  • 2.23e4
62.50
  • 62.50
  • 54.50
  • 46.98
  • 46.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000991gonad
  • MmusDv:0000029Theiler stage 22 (mouse)
1.56e4
  • 1.56e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0001456face
  • MmusDv:0000029Theiler stage 22 (mouse)
1.56e4
  • 1.56e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0002416integumental system
  • MmusDv:0000029Theiler stage 22 (mouse)
1.60e4
  • 1.60e4
61.53
  • 61.53
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.61e4
  • 1.61e4
61.43
  • 61.43
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000104life cycle
  • MmusDv:0000033Theiler stage 24 (mouse)
1.63e4
  • 1.63e4
  • 2.43e4
60.93
  • 60.93
  • 41.77
AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
  • MmusDv:0000061early adult stage
1.65e4
  • 1.65e4
  • 1.92e4
60.53
  • 60.53
  • 53.83
AEIR
  • AEIR
  • AEIR
UBERON:0003081lateral plate mesoderm
  • MmusDv:0000019Theiler stage 12 (mouse)
1.67e4
  • 1.67e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
1.67e4
  • 1.67e4
  • 1.72e4
  • 1.80e4
  • 1.83e4
  • 1.91e4
  • 1.95e4
  • 2.06e4
  • 2.12e4
  • 2.33e4
59.93
  • 59.93
  • 58.65
  • 56.70
  • 56.03
  • 54.09
  • 53.11
  • 50.67
  • 49.14
  • 44.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
  • 1.97e4
  • 2.04e4
  • 2.23e4
  • 2.26e4
  • 2.27e4
  • 2.33e4
  • 2.44e4
  • 2.45e4
  • 2.47e4
  • 2.48e4
  • 2.51e4
  • 2.51e4
  • 2.54e4
  • 2.65e4
59.83
  • 59.83
  • 52.71
  • 50.96
  • 46.45
  • 45.82
  • 45.58
  • 44.12
  • 41.41
  • 41.19
  • 40.84
  • 40.54
  • 39.84
  • 39.78
  • 38.93
  • 36.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003499brain blood vessel
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000075middle aged stage (mouse)
  • UBERON:0007221neonate stage
1.67e4
  • 1.67e4
  • 1.76e4
  • 1.82e4
59.81
  • 59.81
  • 57.70
  • 56.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000075middle aged stage (mouse)
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
  • 2.18e4
  • 2.20e4
  • 2.27e4
  • 2.40e4
  • 2.40e4
  • 2.41e4
  • 2.47e4
  • 2.48e4
  • 2.50e4
  • 2.50e4
  • 2.50e4
  • 2.51e4
  • 2.52e4
  • 2.54e4
  • 2.56e4
  • 2.76e4
  • 3.09e4
59.79
  • 59.79
  • 47.73
  • 47.30
  • 45.50
  • 42.51
  • 42.35
  • 42.26
  • 40.72
  • 40.59
  • 39.95
  • 39.94
  • 39.92
  • 39.86
  • 39.64
  • 38.94
  • 38.58
  • 33.71
  • 25.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
1.69e4
  • 1.69e4
  • 1.93e4
  • 2.00e4
  • 2.17e4
  • 2.20e4
  • 2.32e4
59.47
  • 59.47
  • 53.72
  • 52.07
  • 47.86
  • 47.25
  • 44.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.70e4
  • 1.70e4
  • 1.99e4
  • 2.07e4
59.22
  • 59.22
  • 52.19
  • 50.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005256trunk mesenchyme
  • MmusDv:0000020Theiler stage 13 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
1.74e4
  • 1.74e4
  • 2.08e4
58.33
  • 58.33
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • MmusDv:0000022Theiler stage 15 (mouse)
1.74e4
  • 1.74e4
58.21
  • 58.21
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.75e4
  • 1.75e4
  • 1.85e4
  • 1.86e4
  • 1.94e4
57.89
  • 57.89
  • 55.61
  • 55.48
  • 53.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:00000462 weeks (mouse)
  • MmusDv:0000025Theiler stage 18 (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
  • 1.94e4
  • 1.95e4
  • 2.10e4
  • 2.15e4
  • 2.18e4
  • 2.22e4
  • 2.28e4
  • 2.38e4
  • 2.50e4
  • 2.59e4
57.28
  • 57.28
  • 53.45
  • 53.20
  • 49.61
  • 48.32
  • 47.73
  • 46.65
  • 45.37
  • 42.80
  • 39.94
  • 37.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004877visceral endoderm
  • MmusDv:0000015Theiler stage 10 (mouse)
1.79e4
  • 1.79e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
  • 1.90e4
  • 2.18e4
  • 2.22e4
  • 2.35e4
  • 2.38e4
  • 2.55e4
56.77
  • 56.77
  • 54.43
  • 47.76
  • 46.67
  • 43.70
  • 42.85
  • 38.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • UBERON:0000104life cycle
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
  • 2.19e4
  • 2.36e4
  • 2.43e4
  • 2.52e4
  • 2.55e4
  • 3.56e4
56.50
  • 56.50
  • 47.33
  • 43.41
  • 41.79
  • 39.62
  • 38.85
  • 14.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
56.22
  • 56.22
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
1.83e4
  • 1.83e4
56.02
  • 56.02
AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.92e4
  • 1.92e4
  • 2.49e4
  • 2.59e4
  • 2.89e4
  • 3.18e4
  • 3.66e4
53.93
  • 53.93
  • 40.23
  • 37.97
  • 30.76
  • 23.63
  • 12.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000104life cycle
1.93e4
  • 1.93e4
  • 1.93e4
  • 2.46e4
53.76
  • 53.76
  • 53.75
  • 41.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002424oral epithelium
  • MmusDv:0000032Theiler stage 23 (mouse)
1.95e4
  • 1.95e4
53.09
  • 53.09
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • MmusDv:0000005Theiler stage 02 (mouse)
1.97e4
  • 1.97e4
52.64
  • 52.64
AEIR
  • AEIR
UBERON:0000081metanephros
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000104life cycle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
2.00e4
  • 2.00e4
  • 2.29e4
  • 2.39e4
  • 2.41e4
52.12
  • 52.12
  • 45.15
  • 42.68
  • 42.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
2.00e4
  • 2.00e4
51.92
  • 51.92
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
2.03e4
  • 2.03e4
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:00000495 weeks (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
  • 2.34e4
  • 2.68e4
  • 2.72e4
  • 2.90e4
51.22
  • 51.22
  • 43.92
  • 35.67
  • 34.65
  • 30.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007021sexually immature organism
  • UBERON:0007221neonate stage
  • UBERON:0000104life cycle
2.05e4
  • 2.05e4
  • 2.55e4
50.92
  • 50.92
  • 38.90
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000104life cycle
2.05e4
  • 2.05e4
  • 2.28e4
  • 2.41e4
50.92
  • 50.92
  • 45.38
  • 42.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • MmusDv:00000644 month-old stage (mouse)
  • MmusDv:0000061early adult stage
2.05e4
  • 2.05e4
  • 2.25e4
  • 2.33e4
  • 2.39e4
  • 2.41e4
  • 2.52e4
50.73
  • 50.73
  • 46.11
  • 44.15
  • 42.56
  • 42.25
  • 39.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
EMAPA:16753tail nervous system (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
2.08e4
  • 2.08e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0005253head mesenchyme
  • UBERON:0000110neurula stage
2.08e4
  • 2.08e4
50.00
  • 50.00
AEIR
  • AEIR
EMAPA:16756tail neural plate (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
2.08e4
  • 2.08e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000089hypoblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
2.08e4
  • 2.08e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
2.13e4
  • 2.13e4
48.78
  • 48.78
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
  • 3.18e4
  • 3.43e4
  • 3.46e4
48.62
  • 48.62
  • 23.60
  • 17.72
  • 17.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008947respiratory primordium
  • MmusDv:0000021Theiler stage 14 (mouse)
2.16e4
  • 2.16e4
48.10
  • 48.10
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000104life cycle
2.18e4
  • 2.18e4
  • 2.21e4
  • 2.41e4
  • 2.51e4
  • 2.57e4
47.77
  • 47.77
  • 46.85
  • 42.14
  • 39.70
  • 38.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005147metanephric renal vesicle
  • MmusDv:0000027Theiler stage 20 (mouse)
2.20e4
  • 2.20e4
47.26
  • 47.26
AEIR
  • AEIR
UBERON:0003307floor plate of midbrain
  • MmusDv:0000024Theiler stage 17 (mouse)
2.26e4
  • 2.26e4
45.68
  • 45.68
AEIR
  • AEIR
UBERON:0001987placenta
  • MmusDv:0000020Theiler stage 13 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
2.28e4
  • 2.28e4
  • 2.49e4
  • 2.51e4
  • 2.52e4
45.20
  • 45.20
  • 40.31
  • 39.85
  • 39.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005148metanephric S-shaped body
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000029Theiler stage 22 (mouse)
2.32e4
  • 2.32e4
  • 2.41e4
44.33
  • 44.33
  • 42.13
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
44.25
  • 44.25
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
  • 2.86e4
44.17
  • 44.17
  • 31.44
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.33e4
  • 2.33e4
44.16
  • 44.16
AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00000462 weeks (mouse)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
  • 2.49e4
  • 2.92e4
  • 3.60e4
44.13
  • 44.13
  • 40.14
  • 29.85
  • 13.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000104life cycle
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
2.35e4
  • 2.35e4
  • 2.38e4
  • 2.50e4
  • 2.52e4
  • 2.54e4
  • 2.54e4
  • 2.77e4
  • 3.68e4
43.72
  • 43.72
  • 42.81
  • 40.02
  • 39.49
  • 39.09
  • 39.05
  • 33.42
  • 11.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.51e4
  • 2.51e4
39.72
  • 39.72
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.56e4
  • 2.56e4
38.63
  • 38.63
AEIR
  • AEIR
UBERON:0000323late embryo
  • UBERON:0007220late embryonic stage
2.56e4
  • 2.56e4
38.61
  • 38.61
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
2.56e4
  • 2.56e4
38.59
  • 38.59
AEIR
  • AEIR
UBERON:0005619secondary palatal shelf
  • MmusDv:0000029Theiler stage 22 (mouse)
2.59e4
  • 2.59e4
37.95
  • 37.95
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
2.78e4
  • 2.78e4
33.34
  • 33.34
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
2.88e4
  • 2.88e4
30.89
  • 30.89
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
3.02e4
  • 3.02e4
27.50
  • 27.50
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.06e4
  • 3.06e4
26.50
  • 26.50
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.14e4
  • 3.14e4
24.69
  • 24.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000062327.

Cross-references

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