M. musculus Gene: Syngap1 - ENSMUSG00000067629 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000067629
NameSyngap1
Descriptionsynaptic Ras GTPase activating protein 1 homolog (rat) [Source:MGI Symbol;Acc:MGI:3039785]
OrganismMus musculus (mouse)
Synonym(s)gm1963, syngap

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001954Ammon's horn
  • MmusDv:00000528 weeks (mouse)
657
  • 657
98.40005
  • 98.40005
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
767
  • 767
  • 3.01e3
98.13372
  • 98.13372
  • 92.66789
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
2.34e3
  • 2.34e3
  • 6.54e3
94.30803
  • 94.30803
  • 84.05850
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
3.09e3
  • 3.09e3
  • 6.68e3
92.47647
  • 92.47647
  • 83.72456
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
4.93e3
  • 4.93e3
87.97562
  • 87.97562
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
5.72e3
  • 5.72e3
  • 6.52e3
86.06610
  • 86.06610
  • 84.11013
AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
8.00e3
  • 8.00e3
80.49726
  • 80.49726
AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
8.14e3
  • 8.14e3
  • 9.40e3
80.16870
  • 80.16870
  • 77.09214
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • MmusDv:00000528 weeks (mouse)
8.60e3
  • 8.60e3
79.04205
  • 79.04205
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
9.16e3
  • 9.16e3
  • 1.06e4
77.66862
  • 77.66862
  • 74.20841
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
  • 1.14e4
73.38971
  • 73.38971
  • 72.11884
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
72.17612
  • 72.17612
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
1.17e4
  • 1.17e4
  • 1.28e4
71.48592
  • 71.48592
  • 68.72407
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
1.23e4
  • 1.23e4
  • 1.34e4
70.12258
  • 70.12258
  • 67.23642
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
68.96937
  • 68.96937
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
1.28e4
  • 1.28e4
  • 1.33e4
  • 1.55e4
68.83910
  • 68.83910
  • 67.61696
  • 62.33516
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
67.34604
  • 67.34604
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
1.41e4
  • 1.41e4
65.68678
  • 65.68678
AEIR
  • AEIR
UBERON:0002370thymus
  • MmusDv:00000528 weeks (mouse)
1.50e4
  • 1.50e4
63.34162
  • 63.34162
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
1.53e4
  • 1.53e4
62.68373
  • 62.68373
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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