M. musculus Gene: Rpl13a - ENSMUSG00000074129 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000074129
NameRpl13a
Descriptionribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
OrganismMus musculus (mouse)
Synonym(s)1810026n22rik, p198, tstap198-7, tum-antigen, tum-transplantation antigen p198
Orthologs(s)23 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
24.8
  • 24.8
  • 143
  • 206
  • 260
  • 273
99.94
  • 99.94
  • 99.66
  • 99.51
  • 99.38
  • 99.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
27.0
  • 27.0
  • 367
  • 631
99.94
  • 99.94
  • 99.12
  • 98.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
30.2
  • 30.2
  • 50.3
  • 122
99.93
  • 99.93
  • 99.88
  • 99.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
47.6
  • 47.6
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
48.0
  • 48.0
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
56.5
  • 56.5
  • 127
  • 225
  • 236
  • 242
99.87
  • 99.87
  • 99.70
  • 99.46
  • 99.44
  • 99.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
56.6
  • 56.6
  • 58.7
  • 79.5
  • 475
99.87
  • 99.87
  • 99.86
  • 99.81
  • 98.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
56.6
  • 56.6
99.87
  • 99.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
58.9
  • 58.9
  • 63.3
  • 121
99.86
  • 99.86
  • 99.85
  • 99.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:00000776 month-old stage (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:00000528 weeks (mouse)
64.0
  • 64.0
  • 150
  • 221
  • 238
  • 303
  • 323
  • 338
  • 347
  • 355
  • 434
  • 667
99.85
  • 99.85
  • 99.64
  • 99.47
  • 99.43
  • 99.28
  • 99.23
  • 99.19
  • 99.17
  • 99.15
  • 98.96
  • 98.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
66.7
  • 66.7
  • 407
99.84
  • 99.84
  • 99.03
AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
70.0
  • 70.0
99.83
  • 99.83
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
78.9
  • 78.9
  • 246
99.81
  • 99.81
  • 99.41
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
80.5
  • 80.5
99.81
  • 99.81
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
81.6
  • 81.6
99.81
  • 99.81
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
83.6
  • 83.6
99.80
  • 99.80
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
86.9
  • 86.9
99.79
  • 99.79
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
89.0
  • 89.0
  • 186
  • 246
  • 274
99.79
  • 99.79
  • 99.56
  • 99.41
  • 99.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
89.1
  • 89.1
99.79
  • 99.79
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
92.5
  • 92.5
  • 116
  • 221
99.78
  • 99.78
  • 99.72
  • 99.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
98.7
  • 98.7
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
99.3
  • 99.3
  • 246
  • 275
99.76
  • 99.76
  • 99.41
  • 99.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
  • MmusDv:00000451 week (mouse)
101
  • 101
  • 111
  • 118
  • 134
  • 141
99.76
  • 99.76
  • 99.73
  • 99.72
  • 99.68
  • 99.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
106
  • 106
  • 188
  • 213
99.75
  • 99.75
  • 99.55
  • 99.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
110
  • 110
  • 144
99.74
  • 99.74
  • 99.66
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000066fully formed stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
116
  • 116
  • 164
  • 165
  • 342
99.72
  • 99.72
  • 99.61
  • 99.61
  • 99.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
121
  • 121
99.71
  • 99.71
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
124
  • 124
99.70
  • 99.70
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
126
  • 126
99.70
  • 99.70
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
126
  • 126
99.70
  • 99.70
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
127
  • 127
  • 344
  • 362
  • 395
99.70
  • 99.70
  • 99.18
  • 99.13
  • 99.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
129
  • 129
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0001890forebrain
  • UBERON:0007221neonate stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
131
  • 131
  • 243
  • 253
  • 274
  • 327
  • 413
99.69
  • 99.69
  • 99.42
  • 99.39
  • 99.35
  • 99.22
  • 99.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
132
  • 132
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
143
  • 143
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0002028hindbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
147
  • 147
  • 249
  • 260
  • 396
  • 522
  • 552
99.65
  • 99.65
  • 99.41
  • 99.38
  • 99.05
  • 98.75
  • 98.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
151
  • 151
99.64
  • 99.64
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007221neonate stage
  • UBERON:0000066fully formed stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000528 weeks (mouse)
158
  • 158
  • 218
  • 321
  • 325
  • 362
  • 375
  • 403
  • 424
  • 446
  • 685
99.62
  • 99.62
  • 99.48
  • 99.23
  • 99.22
  • 99.13
  • 99.10
  • 99.04
  • 98.99
  • 98.93
  • 98.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
163
  • 163
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
171
  • 171
99.59
  • 99.59
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
173
  • 173
99.59
  • 99.59
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
178
  • 178
99.57
  • 99.57
AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0007221neonate stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
182
  • 182
  • 254
  • 264
  • 373
  • 557
  • 558
99.57
  • 99.57
  • 99.39
  • 99.37
  • 99.11
  • 98.67
  • 98.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
203
  • 203
  • 213
  • 223
  • 242
99.51
  • 99.51
  • 99.49
  • 99.47
  • 99.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
204
  • 204
  • 463
99.51
  • 99.51
  • 98.89
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
205
  • 205
99.51
  • 99.51
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
209
  • 209
  • 353
99.50
  • 99.50
  • 99.16
AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
209
  • 209
99.50
  • 99.50
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
212
  • 212
  • 238
  • 243
  • 247
99.49
  • 99.49
  • 99.43
  • 99.42
  • 99.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
214
  • 214
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
231
  • 231
99.45
  • 99.45
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
236
  • 236
  • 275
99.44
  • 99.44
  • 99.34
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000061early adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
255
  • 255
  • 356
  • 395
99.39
  • 99.39
  • 99.15
  • 99.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
259
  • 259
99.38
  • 99.38
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
260
  • 260
99.38
  • 99.38
AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
261
  • 261
  • 389
  • 458
99.38
  • 99.38
  • 99.07
  • 98.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
273
  • 273
99.35
  • 99.35
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
303
  • 303
  • 540
  • 705
  • 806
99.28
  • 99.28
  • 98.71
  • 98.31
  • 98.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
335
  • 335
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
385
  • 385
99.08
  • 99.08
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
416
  • 416
99.00
  • 99.00
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
482
  • 482
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
492
  • 492
98.82
  • 98.82
AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
497
  • 497
98.81
  • 98.81
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
609
  • 609
98.54
  • 98.54
AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
1.49e3
  • 1.49e3
96.42
  • 96.42
AEIR
  • AEIR
UBERON:0004134proximal tubule
  • MmusDv:00000622 month-old stage (mouse)
1.57e3
  • 1.57e3
96.22
  • 96.22
AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
2.61e3
  • 2.61e3
93.75
  • 93.75
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
3.22e3
  • 3.22e3
92.28
  • 92.28
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
3.32e3
  • 3.32e3
92.04
  • 92.04
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
3.80e3
  • 3.80e3
90.87
  • 90.87
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
4.98e3
  • 4.98e3
88.05
  • 88.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000074129.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSMUSG00000074129.

Cross-references

CCDSCCDS21230 (CCDS21230.1)
EnsemblENSMUSG00000074129 (Rpl13a)
MGIMGI:1351455 (Rpl13a)
EMBLAC126256, AK007609, AK146318, AK156035, AK168784, AK168903, BC082289, BC086896, CH466603, CT010169, X51528
Uniprot/SPTREMBLQ5M9M0, Q5M9M0_MOUSE
Uniprot/SWISSPROTP19253, RL13A_MOUSE

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