M. musculus Gene: Prdm12 - ENSMUSG00000079466 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000079466
NamePrdm12
DescriptionPR domain containing 12 [Source:MGI Symbol;Acc:MGI:2685844]
OrganismMus musculus (mouse)
Synonym(s)gm998, loc381359

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0014935cerebral cortex marginal layer
  • MmusDv:0000032Theiler stage 23 (mouse)
6.75e3
  • 6.75e3
83.70645
  • 83.70645
AEIR
  • AEIR
EMAPA:16913telencephalon ventricular layer (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
8.29e3
  • 8.29e3
80.00000
  • 80.00000
AEIR
  • AEIR
UBERON:0001017central nervous system
  • MmusDv:0000029Theiler stage 22 (mouse)
8.29e3
  • 8.29e3
79.99759
  • 79.99759
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
8.29e3
  • 8.29e3
  • 1.48e4
  • 1.53e4
79.99469
  • 79.99469
  • 64.28209
  • 63.02537
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002743basal forebrain
  • MmusDv:0000029Theiler stage 22 (mouse)
8.63e3
  • 8.63e3
79.16304
  • 79.16304
AEIR
  • AEIR
UBERON:0004060neural tube ventricular layer
  • MmusDv:0000026Theiler stage 19 (mouse)
8.88e3
  • 8.88e3
78.57023
  • 78.57023
AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
9.06e3
  • 9.06e3
  • 1.55e4
78.11895
  • 78.11895
  • 62.49879
AEIR
  • AEIR
  • AEIR
UBERON:0000010peripheral nervous system
  • MmusDv:0000029Theiler stage 22 (mouse)
9.42e3
  • 9.42e3
77.26910
  • 77.26910
AEIR
  • AEIR
UBERON:0010011collection of basal ganglia
  • MmusDv:0000029Theiler stage 22 (mouse)
9.42e3
  • 9.42e3
77.26910
  • 77.26910
AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
9.67e3
  • 9.67e3
  • 1.27e4
76.66062
  • 76.66062
  • 69.43358
AEIR
  • AEIR
  • AEIR
UBERON:0004061neural tube mantle layer
  • MmusDv:0000026Theiler stage 19 (mouse)
1.04e4
  • 1.04e4
75.00000
  • 75.00000
AEIR
  • AEIR
UBERON:0000044dorsal root ganglion
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.04e4
  • 1.04e4
  • 1.10e4
  • 1.24e4
  • 1.34e4
74.99155
  • 74.99155
  • 73.32610
  • 69.99517
  • 67.74520
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
1.09e4
  • 1.09e4
73.73042
  • 73.73042
AEIR
  • AEIR
UBERON:0000446septum of telencephalon
  • MmusDv:0000029Theiler stage 22 (mouse)
1.12e4
  • 1.12e4
73.07088
  • 73.07088
AEIR
  • AEIR
UBERON:0001894diencephalon
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
1.12e4
  • 1.12e4
  • 1.38e4
  • 1.68e4
73.07088
  • 73.07088
  • 66.65942
  • 59.36171
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001675trigeminal ganglion
  • MmusDv:0000032Theiler stage 23 (mouse)
1.13e4
  • 1.13e4
72.77202
  • 72.77202
AEIR
  • AEIR
UBERON:0006241future spinal cord
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.18e4
  • 1.18e4
  • 1.27e4
71.42615
  • 71.42615
  • 69.22352
AEIR
  • AEIR
  • AEIR
UBERON:0001950neocortex
  • MmusDv:0000029Theiler stage 22 (mouse)
1.18e4
  • 1.18e4
71.42132
  • 71.42132
AEIR
  • AEIR
EMAPA:16979midbrain ventricular layer (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.18e4
  • 1.18e4
71.40683
  • 71.40683
AEIR
  • AEIR
EMAPA:36064cranial preganglion (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
1.24e4
  • 1.24e4
69.99879
  • 69.99879
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • MmusDv:0000029Theiler stage 22 (mouse)
1.31e4
  • 1.31e4
68.40898
  • 68.40898
AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
1.34e4
  • 1.34e4
  • 1.70e4
  • 2.08e4
  • 2.51e4
67.54949
  • 67.54949
  • 58.96736
  • 49.79425
  • 39.38677
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
EMAPA:18576intermediate grey horn (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.38e4
  • 1.38e4
66.65700
  • 66.65700
AEIR
  • AEIR
UBERON:0001701glossopharyngeal ganglion
  • MmusDv:0000032Theiler stage 23 (mouse)
1.38e4
  • 1.38e4
66.65217
  • 66.65217
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • MmusDv:0000029Theiler stage 22 (mouse)
1.42e4
  • 1.42e4
65.61412
  • 65.61412
AEIR
  • AEIR
UBERON:0006240future forebrain
  • MmusDv:0000022Theiler stage 15 (mouse)
1.43e4
  • 1.43e4
65.37617
  • 65.37617
AEIR
  • AEIR
UBERON:0009580diencephalon mantle layer
  • MmusDv:0000032Theiler stage 23 (mouse)
1.47e4
  • 1.47e4
64.44351
  • 64.44351
AEIR
  • AEIR
UBERON:0001934dorsomedial nucleus of hypothalamus
  • UBERON:0000112sexually immature stage
1.48e4
  • 1.48e4
64.28209
  • 64.28209
AEIR
  • AEIR
UBERON:0002435striatum
  • MmusDv:0000027Theiler stage 20 (mouse)
1.48e4
  • 1.48e4
64.28209
  • 64.28209
AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000024Theiler stage 17 (mouse)
1.55e4
  • 1.55e4
62.48793
  • 62.48793
AEIR
  • AEIR
EMAPA:16911telencephalon mantle layer (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.58e4
  • 1.58e4
61.84923
  • 61.84923
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
61.74174
  • 61.74174
AEIR
  • AEIR
EMAPA:17537hypothalamus mantle layer (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.59e4
  • 1.59e4
61.51673
  • 61.51673
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.74e4
  • 1.74e4
57.91258
  • 57.91258
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
1.77e4
  • 1.77e4
57.18448
  • 57.18448
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
1.80e4
  • 1.80e4
  • 2.16e4
  • 2.89e4
56.55225
  • 56.55225
  • 47.96333
  • 30.21743
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.92e4
  • 1.92e4
53.54025
  • 53.54025
AEIR
  • AEIR
EMAPA:16908diencephalon lateral wall ventricular layer (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
2.07e4
  • 2.07e4
49.99879
  • 49.99879
AEIR
  • AEIR
UBERON:0001907zona incerta
  • UBERON:0000112sexually immature stage
2.07e4
  • 2.07e4
49.99879
  • 49.99879
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.16e4
  • 2.16e4
47.79623
  • 47.79623
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
2.25e4
  • 2.25e4
45.78894
  • 45.78894
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.43e4
  • 2.43e4
41.28078
  • 41.28078
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
2.51e4
  • 2.51e4
  • 2.95e4
39.37533
  • 39.37533
  • 28.86960
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000023Theiler stage 16 (mouse)
2.54e4
  • 2.54e4
38.71514
  • 38.71514
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.60e4
  • 2.60e4
37.29650
  • 37.29650
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.67e4
  • 2.67e4
35.43069
  • 35.43069
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.08e4
  • 3.08e4
25.57624
  • 25.57624
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Cross-references

CCDSCCDS50562 (CCDS50562.1)
EMBLAL732564
EnsemblENSMUSG00000079466 (Prdm12)
MGIMGI:2685844 (Prdm12)
Uniprot/SWISSPROTA2AJ77, PRD12_MOUSE

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