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M. musculus Gene: Nhlrc4 - ENSMUSG00000090113 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000090113
NameNhlrc4
DescriptionNHL repeat containing 4 [Source:MGI Symbol;Acc:MGI:3687200]
OrganismMus musculus (mouse)
Synonym(s)f430201b04rik
Orthologs(s)8 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
4.49e3
  • 4.49e3
  • 9.87e3
89.22
  • 89.22
  • 76.33
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
8.10e3
  • 8.10e3
  • 8.14e3
  • 8.15e3
  • 1.83e4
  • 2.82e4
  • 2.99e4
80.57
  • 80.57
  • 80.46
  • 80.45
  • 56.02
  • 32.40
  • 28.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000066fully formed stage
  • UBERON:0007221neonate stage
9.06e3
  • 9.06e3
  • 1.14e4
  • 1.35e4
  • 1.41e4
  • 2.09e4
78.26
  • 78.26
  • 72.55
  • 67.51
  • 66.06
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.05e4
  • 1.05e4
  • 1.14e4
  • 1.18e4
  • 1.84e4
  • 1.87e4
74.92
  • 74.92
  • 72.76
  • 71.59
  • 55.89
  • 55.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
71.05
  • 71.05
AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
1.21e4
  • 1.21e4
71.04
  • 71.04
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
  • 1.52e4
70.22
  • 70.22
  • 63.49
AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
1.29e4
  • 1.29e4
69.16
  • 69.16
AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
1.37e4
  • 1.37e4
67.03
  • 67.03
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.41e4
  • 1.41e4
  • 1.53e4
66.27
  • 66.27
  • 63.31
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
  • 1.58e4
  • 1.87e4
  • 2.10e4
65.52
  • 65.52
  • 62.16
  • 55.14
  • 49.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.44e4
  • 1.44e4
  • 1.93e4
  • 2.89e4
65.41
  • 65.41
  • 53.78
  • 30.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
64.44
  • 64.44
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
64.36
  • 64.36
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
  • 2.00e4
64.32
  • 64.32
  • 51.96
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.60e4
  • 1.60e4
  • 1.66e4
  • 1.86e4
  • 2.80e4
61.58
  • 61.58
  • 60.17
  • 55.35
  • 32.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007221neonate stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
  • 1.64e4
  • 2.65e4
61.51
  • 61.51
  • 60.62
  • 36.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.61e4
  • 1.61e4
61.27
  • 61.27
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
60.76
  • 60.76
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
60.55
  • 60.55
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
60.27
  • 60.27
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.71e4
  • 1.71e4
  • 1.84e4
  • 1.90e4
58.92
  • 58.92
  • 55.92
  • 54.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000034Theiler stage 25 (mouse)
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
1.76e4
  • 1.76e4
  • 1.80e4
  • 2.16e4
  • 2.39e4
  • 3.11e4
57.85
  • 57.85
  • 56.70
  • 48.15
  • 42.65
  • 25.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
1.76e4
  • 1.76e4
  • 2.09e4
  • 2.75e4
57.72
  • 57.72
  • 49.89
  • 33.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.78e4
  • 1.78e4
  • 1.87e4
  • 1.91e4
  • 2.17e4
  • 2.29e4
  • 2.34e4
  • 2.35e4
  • 2.38e4
  • 2.40e4
57.40
  • 57.40
  • 55.12
  • 54.23
  • 48.03
  • 45.14
  • 43.92
  • 43.68
  • 42.81
  • 42.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • UBERON:0007221neonate stage
1.84e4
  • 1.84e4
  • 1.96e4
  • 2.21e4
  • 2.24e4
  • 2.33e4
55.92
  • 55.92
  • 53.02
  • 46.94
  • 46.30
  • 44.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
1.92e4
  • 1.92e4
53.82
  • 53.82
AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.94e4
  • 1.94e4
  • 1.96e4
  • 1.97e4
  • 2.12e4
  • 2.18e4
53.51
  • 53.51
  • 53.07
  • 52.83
  • 49.03
  • 47.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
53.29
  • 53.29
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.98e4
  • 1.98e4
  • 2.12e4
  • 2.39e4
52.50
  • 52.50
  • 49.13
  • 42.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
1.98e4
  • 1.98e4
52.41
  • 52.41
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
2.07e4
  • 2.07e4
50.39
  • 50.39
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
2.07e4
  • 2.07e4
50.31
  • 50.31
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
2.08e4
  • 2.08e4
  • 2.67e4
  • 3.00e4
50.20
  • 50.20
  • 35.84
  • 28.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.08e4
  • 2.08e4
50.08
  • 50.08
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.09e4
  • 2.09e4
  • 2.39e4
49.73
  • 49.73
  • 42.56
AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000026Theiler stage 19 (mouse)
2.11e4
  • 2.11e4
49.37
  • 49.37
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
2.15e4
  • 2.15e4
48.47
  • 48.47
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
2.19e4
  • 2.19e4
47.38
  • 47.38
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
2.21e4
  • 2.21e4
  • 2.29e4
  • 3.08e4
47.05
  • 47.05
  • 44.98
  • 26.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
2.23e4
  • 2.23e4
  • 2.60e4
46.44
  • 46.44
  • 37.50
AEIR
  • AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
2.24e4
  • 2.24e4
46.21
  • 46.21
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
43.35
  • 43.35
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000066fully formed stage
2.58e4
  • 2.58e4
38.06
  • 38.06
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
2.66e4
  • 2.66e4
  • 3.46e4
36.15
  • 36.15
  • 17.06
AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
2.66e4
  • 2.66e4
36.06
  • 36.06
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
2.67e4
  • 2.67e4
35.85
  • 35.85
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.77e4
  • 2.77e4
33.45
  • 33.45
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.90e4
  • 2.90e4
30.43
  • 30.43
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.07e4
  • 3.07e4
26.27
  • 26.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires3 species3 genesCompare expression
Boreoeutheria6 species6 genesCompare expression
Amniota7 species7 genesCompare expression
Tetrapoda8 species8 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000090113.

Cross-references

CCDSCCDS28539 (CCDS28539.1)
EnsemblENSMUSG00000090113 (Nhlrc4)
MGIMGI:3687200 (Nhlrc4)
EMBLAK143822, BC147284, BC147285
Uniprot/SWISSPROTNHLC4_MOUSE, Q3UP44

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