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M. musculus Gene: Phf11c - ENSMUSG00000091144 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000091144
NamePhf11c
DescriptionPHD finger protein 11C [Source:MGI Symbol;Acc:MGI:3648476]
OrganismMus musculus (mouse)
Synonym(s)eg628705, gm6907, gm6907gn, phf11
Orthologs(s)15 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • MmusDv:0000061early adult stage
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
7.89e3
  • 7.89e3
  • 1.52e4
  • 1.52e4
81.06
  • 81.06
  • 63.56
  • 63.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
8.25e3
  • 8.25e3
  • 1.45e4
  • 1.46e4
  • 1.64e4
80.20
  • 80.20
  • 65.23
  • 64.98
  • 60.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
9.23e3
  • 9.23e3
  • 1.03e4
  • 1.05e4
  • 1.14e4
  • 1.15e4
  • 1.22e4
  • 1.48e4
  • 1.48e4
  • 1.51e4
  • 1.71e4
77.86
  • 77.86
  • 75.39
  • 74.84
  • 72.56
  • 72.52
  • 70.63
  • 64.56
  • 64.39
  • 63.87
  • 58.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
1.06e4
  • 1.06e4
  • 1.20e4
  • 1.23e4
  • 2.04e4
74.56
  • 74.56
  • 71.17
  • 70.48
  • 51.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.09e4
  • 1.09e4
73.74
  • 73.74
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
1.12e4
  • 1.12e4
  • 1.30e4
73.18
  • 73.18
  • 68.92
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000484 weeks (mouse)
1.19e4
  • 1.19e4
  • 1.34e4
  • 1.35e4
  • 1.99e4
71.54
  • 71.54
  • 67.80
  • 67.58
  • 52.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000034Theiler stage 25 (mouse)
1.20e4
  • 1.20e4
  • 2.10e4
  • 2.16e4
  • 2.37e4
  • 2.74e4
71.22
  • 71.22
  • 49.67
  • 48.25
  • 43.11
  • 34.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
69.62
  • 69.62
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
  • 1.56e4
69.43
  • 69.43
  • 62.51
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.30e4
  • 1.30e4
  • 1.44e4
  • 1.47e4
  • 1.51e4
68.84
  • 68.84
  • 65.36
  • 64.81
  • 63.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
68.66
  • 68.66
AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
1.32e4
  • 1.32e4
68.23
  • 68.23
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
67.94
  • 67.94
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
67.86
  • 67.86
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
1.36e4
  • 1.36e4
67.45
  • 67.45
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.38e4
  • 1.38e4
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
  • 1.57e4
  • 1.57e4
  • 1.64e4
66.46
  • 66.46
  • 62.45
  • 62.23
  • 60.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
66.21
  • 66.21
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
1.44e4
  • 1.44e4
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
1.45e4
  • 1.45e4
65.24
  • 65.24
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
64.99
  • 64.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
1.47e4
  • 1.47e4
  • 1.51e4
  • 1.58e4
  • 1.60e4
  • 1.62e4
  • 1.71e4
  • 1.80e4
  • 1.82e4
  • 1.96e4
  • 2.54e4
64.81
  • 64.81
  • 63.78
  • 62.02
  • 61.71
  • 61.02
  • 59.00
  • 56.70
  • 56.25
  • 53.01
  • 39.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
64.81
  • 64.81
AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
1.47e4
  • 1.47e4
64.73
  • 64.73
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.47e4
  • 1.47e4
  • 1.48e4
  • 1.50e4
64.66
  • 64.66
  • 64.48
  • 63.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
1.47e4
  • 1.47e4
64.65
  • 64.65
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
1.48e4
  • 1.48e4
64.60
  • 64.60
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
64.29
  • 64.29
AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.49e4
  • 1.49e4
  • 1.65e4
  • 1.81e4
  • 1.87e4
64.18
  • 64.18
  • 60.35
  • 56.47
  • 55.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000032Theiler stage 23 (mouse)
1.51e4
  • 1.51e4
  • 1.85e4
  • 1.90e4
  • 1.96e4
63.82
  • 63.82
  • 55.55
  • 54.39
  • 53.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
  • 1.76e4
  • 1.78e4
  • 1.80e4
  • 1.99e4
63.26
  • 63.26
  • 57.85
  • 57.30
  • 56.90
  • 52.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
63.24
  • 63.24
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
63.17
  • 63.17
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
  • 1.77e4
62.72
  • 62.72
  • 57.48
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
62.68
  • 62.68
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.56e4
  • 1.56e4
  • 1.72e4
  • 1.72e4
62.51
  • 62.51
  • 58.80
  • 58.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
62.38
  • 62.38
AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
62.29
  • 62.29
AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
1.60e4
  • 1.60e4
61.73
  • 61.73
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
1.60e4
  • 1.60e4
  • 1.79e4
61.69
  • 61.69
  • 56.96
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
61.34
  • 61.34
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.61e4
  • 1.61e4
  • 1.62e4
  • 1.87e4
  • 1.94e4
61.34
  • 61.34
  • 61.05
  • 55.03
  • 53.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:00001134-7 days (mouse)
1.61e4
  • 1.61e4
  • 1.69e4
  • 1.72e4
  • 1.78e4
  • 1.82e4
61.31
  • 61.31
  • 59.45
  • 58.78
  • 57.36
  • 56.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
61.15
  • 61.15
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.62e4
  • 1.62e4
  • 1.78e4
  • 1.92e4
61.10
  • 61.10
  • 57.41
  • 54.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
1.62e4
  • 1.62e4
61.04
  • 61.04
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
  • 1.74e4
60.86
  • 60.86
  • 58.22
AEIR
  • AEIR
  • AEIR
UBERON:0004134proximal tubule
  • MmusDv:00000622 month-old stage (mouse)
1.66e4
  • 1.66e4
60.14
  • 60.14
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
1.67e4
  • 1.67e4
60.03
  • 60.03
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0007221neonate stage
1.69e4
  • 1.69e4
  • 1.80e4
  • 1.92e4
  • 1.92e4
  • 2.01e4
  • 2.41e4
59.50
  • 59.50
  • 56.80
  • 54.02
  • 53.94
  • 51.84
  • 42.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
59.26
  • 59.26
AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.70e4
  • 1.70e4
  • 1.70e4
  • 2.02e4
  • 2.14e4
  • 2.28e4
59.23
  • 59.23
  • 59.22
  • 51.56
  • 48.56
  • 45.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.70e4
  • 1.70e4
  • 1.83e4
  • 2.04e4
  • 2.21e4
  • 2.29e4
59.18
  • 59.18
  • 56.01
  • 51.06
  • 47.00
  • 45.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.70e4
  • 1.70e4
  • 1.98e4
  • 2.11e4
59.14
  • 59.14
  • 52.40
  • 49.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
58.99
  • 58.99
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
57.89
  • 57.89
AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.79e4
  • 1.79e4
  • 1.83e4
56.96
  • 56.96
  • 56.12
AEIR
  • AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.80e4
  • 1.80e4
56.89
  • 56.89
AEIR
  • AEIR
UBERON:0001040yolk sac
  • MmusDv:0000023Theiler stage 16 (mouse)
1.88e4
  • 1.88e4
54.95
  • 54.95
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.88e4
  • 1.88e4
54.93
  • 54.93
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.95e4
  • 1.95e4
53.12
  • 53.12
AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
2.00e4
  • 2.00e4
52.06
  • 52.06
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
2.00e4
  • 2.00e4
51.93
  • 51.93
AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
  • 2.25e4
51.31
  • 51.31
  • 46.01
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.05e4
  • 2.05e4
50.84
  • 50.84
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
  • 2.06e4
  • 2.11e4
  • 2.40e4
50.83
  • 50.83
  • 50.52
  • 49.31
  • 42.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
50.67
  • 50.67
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
2.14e4
  • 2.14e4
48.68
  • 48.68
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
47.80
  • 47.80
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.34e4
  • 2.34e4
43.91
  • 43.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Theria12 species13 genesCompare expression
Amniota14 species15 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000091144.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Glires4 genesCompare expression

Paralogy information comes from OMA : ENSMUSG00000091144.

Cross-references

CCDSCCDS49512 (CCDS49512.1)
EnsemblENSMUSG00000091144 (Phf11c)
MGIMGI:3648476 (Phf11c)
EMBLAC114007, EU155106
Uniprot/SPTREMBLB4XVP9, B4XVP9_MOUSE

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