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M. musculus Gene: Phf11b - ENSMUSG00000091649 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000091649
NamePhf11b
DescriptionPHD finger protein 11B [Source:MGI Symbol;Acc:MGI:3645789]
OrganismMus musculus (mouse)
Synonym(s)eg236451, eg628705, gm4902, gm4902gn
Orthologs(s)16 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000484 weeks (mouse)
3.63e3
  • 3.63e3
  • 3.74e3
  • 4.89e3
  • 1.89e4
91.30
  • 91.30
  • 91.02
  • 88.28
  • 54.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
4.38e3
  • 4.38e3
89.49
  • 89.49
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000061early adult stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
6.59e3
  • 6.59e3
  • 1.45e4
  • 1.50e4
84.20
  • 84.20
  • 65.21
  • 63.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
  • 1.06e4
  • 1.27e4
  • 1.36e4
83.47
  • 83.47
  • 74.68
  • 69.60
  • 67.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
7.62e3
  • 7.62e3
  • 7.72e3
  • 8.55e3
81.71
  • 81.71
  • 81.48
  • 79.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
9.38e3
  • 9.38e3
  • 1.04e4
  • 1.20e4
  • 1.78e4
  • 1.81e4
77.50
  • 77.50
  • 75.15
  • 71.15
  • 57.37
  • 56.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
9.98e3
  • 9.98e3
76.05
  • 76.05
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.01e4
  • 1.01e4
  • 1.18e4
  • 1.30e4
  • 1.45e4
  • 1.46e4
  • 1.47e4
  • 1.71e4
  • 2.79e4
  • 2.84e4
75.66
  • 75.66
  • 71.70
  • 68.80
  • 65.16
  • 65.02
  • 64.79
  • 59.04
  • 33.14
  • 31.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
1.06e4
  • 1.06e4
74.59
  • 74.59
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.07e4
  • 1.07e4
  • 1.18e4
  • 1.19e4
  • 1.21e4
  • 1.27e4
  • 1.28e4
  • 1.31e4
  • 1.32e4
  • 1.74e4
  • 1.90e4
74.30
  • 74.30
  • 71.77
  • 71.56
  • 70.86
  • 69.58
  • 69.39
  • 68.60
  • 68.35
  • 58.19
  • 54.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
1.12e4
  • 1.12e4
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
72.80
  • 72.80
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
72.03
  • 72.03
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
71.20
  • 71.20
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
71.08
  • 71.08
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
70.85
  • 70.85
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
  • 1.76e4
70.24
  • 70.24
  • 57.72
AEIR
  • AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
69.40
  • 69.40
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
69.24
  • 69.24
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
1.29e4
  • 1.29e4
  • 1.41e4
  • 1.42e4
69.14
  • 69.14
  • 66.19
  • 65.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
1.34e4
  • 1.34e4
67.95
  • 67.95
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.34e4
  • 1.34e4
67.78
  • 67.78
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
66.44
  • 66.44
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
65.79
  • 65.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
  • 1.58e4
65.62
  • 65.62
  • 62.00
AEIR
  • AEIR
  • AEIR
UBERON:0004134proximal tubule
  • MmusDv:00000622 month-old stage (mouse)
1.45e4
  • 1.45e4
65.31
  • 65.31
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.45e4
  • 1.45e4
  • 1.67e4
  • 1.72e4
  • 1.81e4
65.15
  • 65.15
  • 59.94
  • 58.75
  • 56.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
  • 1.67e4
63.62
  • 63.62
  • 59.89
AEIR
  • AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
62.92
  • 62.92
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
1.57e4
  • 1.57e4
  • 1.65e4
  • 2.28e4
62.40
  • 62.40
  • 60.44
  • 45.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.69e4
  • 1.69e4
  • 1.75e4
59.38
  • 59.38
  • 57.97
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
1.71e4
  • 1.71e4
  • 2.03e4
  • 2.05e4
  • 2.79e4
59.08
  • 59.08
  • 51.37
  • 50.70
  • 33.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • UBERON:0007221neonate stage
  • MmusDv:00000451 week (mouse)
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00001134-7 days (mouse)
1.71e4
  • 1.71e4
  • 1.83e4
  • 1.84e4
  • 1.90e4
  • 2.66e4
58.98
  • 58.98
  • 56.14
  • 55.94
  • 54.38
  • 36.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
1.74e4
  • 1.74e4
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.74e4
  • 1.74e4
  • 2.06e4
  • 2.08e4
  • 2.94e4
58.31
  • 58.31
  • 50.49
  • 50.08
  • 29.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0007221neonate stage
1.74e4
  • 1.74e4
  • 1.98e4
  • 2.19e4
  • 2.20e4
  • 2.88e4
  • 2.91e4
58.18
  • 58.18
  • 52.47
  • 47.35
  • 47.31
  • 30.94
  • 30.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.78e4
  • 1.78e4
57.39
  • 57.39
AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.78e4
  • 1.78e4
  • 1.85e4
  • 2.03e4
57.29
  • 57.29
  • 55.62
  • 51.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.80e4
  • 1.80e4
  • 2.02e4
  • 2.10e4
56.75
  • 56.75
  • 51.47
  • 49.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.82e4
  • 1.82e4
56.41
  • 56.41
AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
56.34
  • 56.34
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
55.28
  • 55.28
AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
1.87e4
  • 1.87e4
  • 2.09e4
  • 2.18e4
  • 2.70e4
  • 2.85e4
55.20
  • 55.20
  • 49.86
  • 47.58
  • 35.24
  • 31.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
  • 2.53e4
  • 2.54e4
  • 3.17e4
53.81
  • 53.81
  • 39.22
  • 39.02
  • 23.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
52.32
  • 52.32
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
2.00e4
  • 2.00e4
  • 2.76e4
  • 3.12e4
52.08
  • 52.08
  • 33.83
  • 25.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.02e4
  • 2.02e4
  • 2.16e4
  • 2.30e4
  • 2.32e4
  • 2.42e4
51.42
  • 51.42
  • 48.08
  • 44.82
  • 44.24
  • 41.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
2.05e4
  • 2.05e4
50.81
  • 50.81
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
50.52
  • 50.52
AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000633 month-old stage (mouse)
2.08e4
  • 2.08e4
  • 2.11e4
  • 2.25e4
  • 3.11e4
50.15
  • 50.15
  • 49.33
  • 46.12
  • 25.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
  • 2.34e4
49.76
  • 49.76
  • 43.87
AEIR
  • AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
2.14e4
  • 2.14e4
48.67
  • 48.67
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
2.17e4
  • 2.17e4
48.03
  • 48.03
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
  • 2.17e4
48.02
  • 48.02
  • 47.81
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.19e4
  • 2.19e4
47.41
  • 47.41
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
44.42
  • 44.42
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
2.46e4
  • 2.46e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
2.49e4
  • 2.49e4
  • 2.60e4
  • 2.94e4
40.28
  • 40.28
  • 37.70
  • 29.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
2.67e4
  • 2.67e4
35.99
  • 35.99
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.80e4
  • 2.80e4
32.72
  • 32.72
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
2.83e4
  • 2.83e4
31.99
  • 31.99
AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
2.85e4
  • 2.85e4
31.73
  • 31.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species13 genesCompare expression
Theria13 species14 genesCompare expression
Amniota15 species16 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000091649.

Paralogs (same species)

Paralogy information comes from OMA : ENSMUSG00000091649.

Cross-references

CCDSCCDS49510 (CCDS49510.1)
EnsemblENSMUSG00000091649 (Phf11b)
MGIMGI:3645789 (Phf11b)
EMBLAC114007, EU155108
Uniprot/SPTREMBLB4XVQ1, B4XVQ1_MOUSE

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