M. musculus Gene: Ascl5 - ENSMUSG00000097918 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000097918
NameAscl5
Descriptionachaete-scute family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:2685043]
OrganismMus musculus (mouse)
Synonym(s)ascl5-ps, bhlha47, gm197, loc226439

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0007221neonate stage
  • MmusDv:0000028Theiler stage 21 (mouse)
3.77e3
  • 3.77e3
  • 1.13e4
90.90975
  • 90.90975
  • 72.72245
AEIR
  • AEIR
  • AEIR
UBERON:0003134female reproductive organ
  • MmusDv:0000032Theiler stage 23 (mouse)
1.04e4
  • 1.04e4
74.99759
  • 74.99759
AEIR
  • AEIR
UBERON:0000056ureter
  • MmusDv:0000032Theiler stage 23 (mouse)
1.08e4
  • 1.08e4
73.90097
  • 73.90097
AEIR
  • AEIR
UBERON:0001017central nervous system
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.38e4
  • 1.38e4
  • 2.07e4
66.66183
  • 66.66183
  • 49.99638
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
59.59116
  • 59.59116
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.92e4
  • 1.92e4
53.76217
  • 53.76217
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
1.98e4
  • 1.98e4
  • 2.20e4
  • 3.09e4
52.27786
  • 52.27786
  • 46.93626
  • 25.42250
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.03e4
  • 2.03e4
50.92417
  • 50.92417
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000076aged adult stage (mouse)
2.09e4
  • 2.09e4
  • 2.45e4
  • 2.75e4
49.65715
  • 49.65715
  • 40.95466
  • 33.65855
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
2.11e4
  • 2.11e4
48.97634
  • 48.97634
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
2.18e4
  • 2.18e4
47.26777
  • 47.26777
AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.24e4
  • 2.24e4
45.85466
  • 45.85466
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
2.24e4
  • 2.24e4
45.82810
  • 45.82810
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
2.48e4
  • 2.48e4
40.19220
  • 40.19220
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
2.56e4
  • 2.56e4
  • 3.00e4
38.25575
  • 38.25575
  • 27.64831
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.61e4
  • 2.61e4
  • 2.94e4
37.04119
  • 37.04119
  • 29.13197
AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
2.73e4
  • 2.73e4
34.09959
  • 34.09959
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
2.74e4
  • 2.74e4
33.78276
  • 33.78276
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.91e4
  • 2.91e4
  • 3.17e4
29.76712
  • 29.76712
  • 23.46055
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000061early adult stage
3.06e4
  • 3.06e4
  • 3.45e4
  • 3.55e4
26.20212
  • 26.20212
  • 16.69479
  • 14.36987
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.09e4
  • 3.09e4
25.39824
  • 25.39824
AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
3.30e4
  • 3.30e4
  • 3.81e4
20.40707
  • 20.40707
  • 8.11731
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.35e4
  • 3.35e4
19.14437
  • 19.14437
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:00000622 month-old stage (mouse)
3.46e4
  • 3.46e4
16.35541
  • 16.35541
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
3.56e4
  • 3.56e4
  • 3.66e4
14.00671
  • 14.00671
  • 11.55476
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Cross-references

CCDSCCDS59541 (CCDS59541.1)
EMBLAC124375
EnsemblENSMUSG00000097918 (Ascl5)
MGIMGI:2685043 (Ascl5)
Uniprot/SPTREMBLM0QWB7, M0QWB7_MOUSE

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