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M. musculus Gene: Ms4a4a - ENSMUSG00000101389 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000101389
NameMs4a4a
Descriptionmembrane-spanning 4-domains, subfamily A, member 4A [Source:MGI Symbol;Acc:MGI:3643932]
OrganismMus musculus (mouse)
Synonym(s)eg666907
Orthologs(s)20 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
593
  • 593
98.58
  • 98.58
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
8.66e3
  • 8.66e3
  • 1.00e4
  • 1.12e4
79.23
  • 79.23
  • 76.01
  • 73.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002101limb
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
8.79e3
  • 8.79e3
  • 1.17e4
  • 1.45e4
  • 1.63e4
78.91
  • 78.91
  • 72.00
  • 65.27
  • 60.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.94e3
  • 8.94e3
78.54
  • 78.54
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
9.09e3
  • 9.09e3
78.19
  • 78.19
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • UBERON:0007221neonate stage
9.18e3
  • 9.18e3
  • 1.02e4
  • 1.04e4
  • 1.07e4
  • 1.08e4
  • 1.17e4
  • 1.20e4
  • 1.77e4
  • 2.04e4
  • 2.39e4
77.97
  • 77.97
  • 75.54
  • 75.09
  • 74.32
  • 74.09
  • 71.87
  • 71.14
  • 57.58
  • 51.04
  • 42.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
77.22
  • 77.22
AEIR
  • AEIR
UBERON:0000945stomach
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
9.60e3
  • 9.60e3
  • 9.86e3
  • 1.11e4
  • 1.47e4
76.96
  • 76.96
  • 76.35
  • 73.27
  • 64.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000027Theiler stage 20 (mouse)
9.91e3
  • 9.91e3
  • 1.05e4
  • 1.39e4
76.22
  • 76.22
  • 74.77
  • 66.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
76.16
  • 76.16
AEIR
  • AEIR
UBERON:0012314embryonic facial prominence
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.00e4
  • 1.00e4
  • 1.30e4
  • 1.39e4
  • 1.44e4
75.90
  • 75.90
  • 68.77
  • 66.61
  • 65.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
  • 1.51e4
75.18
  • 75.18
  • 63.88
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
1.05e4
  • 1.05e4
74.82
  • 74.82
AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
  • 1.13e4
  • 1.35e4
  • 1.39e4
  • 1.79e4
73.87
  • 73.87
  • 72.86
  • 67.59
  • 66.56
  • 57.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
73.74
  • 73.74
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
1.10e4
  • 1.10e4
  • 1.40e4
  • 1.61e4
  • 1.62e4
  • 2.53e4
73.58
  • 73.58
  • 66.38
  • 61.25
  • 61.10
  • 39.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
72.14
  • 72.14
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
72.09
  • 72.09
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
  • 1.21e4
  • 1.38e4
72.02
  • 72.02
  • 70.87
  • 66.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
1.18e4
  • 1.18e4
  • 1.18e4
71.70
  • 71.70
  • 71.57
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.25e4
  • 1.89e4
71.70
  • 71.70
  • 69.99
  • 54.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000061early adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
  • MmusDv:00000622 month-old stage (mouse)
1.19e4
  • 1.19e4
  • 1.20e4
  • 1.32e4
  • 1.48e4
  • 1.98e4
  • 2.26e4
  • 2.27e4
  • 2.29e4
  • 2.75e4
  • 3.10e4
71.48
  • 71.48
  • 71.16
  • 68.41
  • 64.40
  • 52.40
  • 45.66
  • 45.50
  • 45.06
  • 34.03
  • 25.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
71.01
  • 71.01
AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.22e4
  • 1.22e4
70.77
  • 70.77
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
1.25e4
  • 1.25e4
70.04
  • 70.04
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000066fully formed stage
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
  • 1.28e4
69.87
  • 69.87
  • 69.31
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:0000061early adult stage
1.26e4
  • 1.26e4
  • 1.57e4
  • 3.30e4
69.86
  • 69.86
  • 62.28
  • 20.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001347white adipose tissue
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
69.23
  • 69.23
AEIR
  • AEIR
UBERON:0001891midbrain
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0007221neonate stage
1.31e4
  • 1.31e4
  • 1.36e4
  • 1.38e4
  • 1.49e4
  • 1.52e4
  • 2.12e4
68.56
  • 68.56
  • 67.44
  • 66.86
  • 64.15
  • 63.43
  • 49.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
1.32e4
  • 1.32e4
  • 1.35e4
  • 1.52e4
68.39
  • 68.39
  • 67.52
  • 63.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • UBERON:0007221neonate stage
1.38e4
  • 1.38e4
  • 1.40e4
  • 1.45e4
  • 1.45e4
  • 1.45e4
  • 1.91e4
66.77
  • 66.77
  • 66.39
  • 65.32
  • 65.26
  • 65.10
  • 54.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.41e4
  • 1.41e4
  • 2.91e4
66.23
  • 66.23
  • 30.20
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000644 month-old stage (mouse)
1.42e4
  • 1.42e4
  • 1.50e4
66.04
  • 66.04
  • 63.92
AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
1.46e4
  • 1.46e4
65.07
  • 65.07
AEIR
  • AEIR
UBERON:0001890forebrain
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000033Theiler stage 24 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:0000028Theiler stage 21 (mouse)
  • UBERON:0007221neonate stage
1.50e4
  • 1.50e4
  • 1.51e4
  • 1.51e4
  • 1.52e4
  • 1.73e4
  • 2.10e4
63.96
  • 63.96
  • 63.75
  • 63.71
  • 63.41
  • 58.52
  • 49.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
1.52e4
  • 1.52e4
  • 2.19e4
  • 3.02e4
63.51
  • 63.51
  • 47.52
  • 27.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
1.62e4
  • 1.62e4
61.20
  • 61.20
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
60.85
  • 60.85
AEIR
  • AEIR
UBERON:0004539right kidney
  • MmusDv:00000622 month-old stage (mouse)
1.65e4
  • 1.65e4
60.52
  • 60.52
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
60.26
  • 60.26
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.71e4
  • 1.71e4
59.01
  • 59.01
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.75e4
  • 1.75e4
57.98
  • 57.98
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
1.86e4
  • 1.86e4
  • 2.00e4
  • 2.91e4
  • 3.01e4
55.36
  • 55.36
  • 51.90
  • 30.28
  • 27.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002435striatum
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
52.70
  • 52.70
AEIR
  • AEIR
UBERON:0000955brain
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000633 month-old stage (mouse)
1.97e4
  • 1.97e4
  • 2.00e4
  • 2.32e4
  • 2.44e4
  • 3.11e4
52.66
  • 52.66
  • 52.05
  • 44.35
  • 41.35
  • 25.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.00e4
  • 2.00e4
52.11
  • 52.11
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
  • 3.58e4
51.86
  • 51.86
  • 14.16
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
2.03e4
  • 2.03e4
51.35
  • 51.35
AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
51.05
  • 51.05
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000066fully formed stage
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
2.06e4
  • 2.06e4
  • 2.27e4
  • 2.29e4
  • 2.47e4
50.67
  • 50.67
  • 45.54
  • 45.12
  • 40.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.07e4
  • 2.07e4
50.23
  • 50.23
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.13e4
  • 2.13e4
48.87
  • 48.87
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
  • 2.71e4
48.34
  • 48.34
  • 35.09
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
47.88
  • 47.88
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
45.18
  • 45.18
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
2.50e4
  • 2.50e4
40.00
  • 40.00
AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000026Theiler stage 19 (mouse)
2.56e4
  • 2.56e4
38.63
  • 38.63
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000066fully formed stage
  • MmusDv:00000528 weeks (mouse)
2.69e4
  • 2.69e4
  • 2.70e4
35.41
  • 35.41
  • 35.31
AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
2.87e4
  • 2.87e4
31.06
  • 31.06
AEIR
  • AEIR
UBERON:0004134proximal tubule
  • MmusDv:00000622 month-old stage (mouse)
3.18e4
  • 3.18e4
23.58
  • 23.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires6 species9 genesCompare expression
Boreoeutheria11 species18 genesCompare expression
Mammalia12 species20 genesCompare expression

Orthology information comes from OMA : ENSMUSG00000101389.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Rodentia3 genesCompare expression

Paralogy information comes from OMA : ENSMUSG00000101389.

Cross-references

CCDSCCDS79692 (CCDS79692.1)
EnsemblENSMUSG00000101389 (Ms4a4a)
MGIMGI:3643932 (Ms4a4a)
EMBLAC125406
Uniprot/SPTREMBLA0A087WRT7, A0A087WRT7_MOUSE

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