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O. anatinus Gene: TMED5 - ENSOANG00000001149 - Ornithorhynchus anatinus (platypus)

General information

Ensembl IDENSOANG00000001149
NameTMED5
Descriptiontransmembrane p24 trafficking protein 5 [Source:HGNC Symbol;Acc:HGNC:24251]
OrganismOrnithorhynchus anatinus (platypus)
Synonym(s)cgi-100, p24g2, p24gamma2
Orthologs(s)32 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.21e3
  • 1.21e3
  • 1.42e3
94.55
  • 94.55
  • 93.59
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0018241prime adult stage
1.99e3
  • 1.99e3
91.05
  • 91.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
3.13e3
  • 3.13e3
85.92
  • 85.92
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
5.54e3
  • 5.54e3
75.04
  • 75.04
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
5.82e3
  • 5.82e3
73.78
  • 73.78
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.90e3
  • 5.90e3
73.43
  • 73.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.72e3
  • 6.72e3
69.75
  • 69.75
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
7.61e3
  • 7.61e3
65.72
  • 65.72
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
52.66
  • 52.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria25 species32 genesCompare expression

Orthology information comes from OMA : ENSOANG00000001149.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression
Opisthokonta3 genesCompare expression

Paralogy information comes from OMA : ENSOANG00000001149.

Cross-references

EnsemblENSOANG00000001149 (TMED5)
HGNCHGNC:24251 (TMED5)
Uniprot/SPTREMBLF6R7L6, F6R7L6_ORNAN

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