O. anatinus Gene: TRIM8 - ENSOANG00000001654 - Ornithorhynchus anatinus (platypus)

General information

Ensembl IDENSOANG00000001654
NameTRIM8
Descriptiontripartite motif containing 8 [Source:HGNC Symbol;Acc:HGNC:15579]
OrganismOrnithorhynchus anatinus (platypus)
Synonym(s)gerp, rnf27
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000057fibroblast
  • UBERON:0018241prime adult stage
1.37e3
  • 1.37e3
93.82
  • 93.82
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.85e3
  • 1.85e3
91.67
  • 91.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.05e3
  • 2.05e3
  • 3.11e3
90.79
  • 90.79
  • 85.98
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.64e3
  • 2.64e3
88.10
  • 88.10
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.87e3
  • 2.87e3
87.06
  • 87.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.88e3
  • 2.88e3
87.04
  • 87.04
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
3.32e3
  • 3.32e3
85.05
  • 85.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.25e3
  • 7.25e3
67.35
  • 67.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSOANG00000001654.

Cross-references

EnsemblENSOANG00000001654 (TRIM8)
HGNCHGNC:15579 (TRIM8)
Uniprot/SPTREMBLF7D087, F7D087_ORNAN

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