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O. anatinus Gene: VEGFA - ENSOANG00000003965 - Ornithorhynchus anatinus (platypus)

General information

Ensembl IDENSOANG00000003965
NameVEGFA
Descriptionvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]
OrganismOrnithorhynchus anatinus (platypus)
Synonym(s)vegf, vegf-a, vpf
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.19e3
  • 2.19e3
90.13
  • 90.13
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.38e3
  • 2.38e3
89.27
  • 89.27
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.60e3
  • 2.60e3
88.31
  • 88.31
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0018241prime adult stage
2.73e3
  • 2.73e3
87.69
  • 87.69
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.27e3
  • 3.27e3
85.30
  • 85.30
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
7.18e3
  • 7.18e3
67.67
  • 67.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
9.87e3
  • 9.87e3
  • 1.17e4
55.53
  • 55.53
  • 47.42
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
32.65
  • 32.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Mammalia6 species6 genesCompare expression
Amniota8 species8 genesCompare expression
Tetrapoda9 species9 genesCompare expression
Euteleostomi10 species10 genesCompare expression

Orthology information comes from OMA : ENSOANG00000003965.

Cross-references

EnsemblENSOANG00000003965 (VEGFA)
HGNCHGNC:12680 (VEGFA)
Uniprot/SPTREMBLF6T3X0, F6T3X0_ORNAN, F6T3X9, F6T3X9_ORNAN

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