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O. anatinus Gene: ATXN2 - ENSOANG00000004796 - Ornithorhynchus anatinus (platypus)

General information

Ensembl IDENSOANG00000004796
NameATXN2
Descriptionataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]
OrganismOrnithorhynchus anatinus (platypus)
Synonym(s)atx2, sca2, tnrc13
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.83e3
  • 2.83e3
  • 5.36e3
87.28
  • 87.28
  • 75.88
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.96e3
  • 2.96e3
86.67
  • 86.67
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.41e3
  • 3.41e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.76e3
  • 3.76e3
83.09
  • 83.09
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
3.85e3
  • 3.85e3
82.65
  • 82.65
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.18e3
  • 4.18e3
81.19
  • 81.19
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0018241prime adult stage
5.45e3
  • 5.45e3
75.46
  • 75.46
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
5.97e3
  • 5.97e3
73.12
  • 73.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSOANG00000004796.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression

Paralogy information comes from OMA : ENSOANG00000004796.

Cross-references

EnsemblENSOANG00000004796 (ATXN2)
HGNCHGNC:10555 (ATXN2)
EMBLAAPN01210573, AAPN01210574
Uniprot/SPTREMBLF7FFP9, F7FFP9_ORNAN

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