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O. anatinus Gene: TCEA1 - ENSOANG00000007284 - Ornithorhynchus anatinus (platypus)

General information

Ensembl IDENSOANG00000007284
NameTCEA1
Descriptiontranscription elongation factor A (SII), 1 [Source:HGNC Symbol;Acc:HGNC:11612]
OrganismOrnithorhynchus anatinus (platypus)
Synonym(s)gtf2s, sii, tcea, tf2s, tfiis
Orthologs(s)19 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.48e3
  • 1.48e3
  • 3.74e3
93.32
  • 93.32
  • 83.17
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0018241prime adult stage
1.78e3
  • 1.78e3
91.99
  • 91.99
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
2.62e3
  • 2.62e3
88.19
  • 88.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
3.92e3
  • 3.92e3
82.36
  • 82.36
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.06e3
  • 6.06e3
72.70
  • 72.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
7.61e3
  • 7.61e3
65.74
  • 65.74
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.13e3
  • 8.13e3
63.39
  • 63.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
8.52e3
  • 8.52e3
61.65
  • 61.65
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
9.68e3
  • 9.68e3
56.39
  • 56.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Mammalia6 species9 genesCompare expression
Amniota8 species11 genesCompare expression
Tetrapoda9 species12 genesCompare expression
Euteleostomi10 species13 genesCompare expression
Bilateria16 species19 genesCompare expression

Orthology information comes from OMA : ENSOANG00000007284.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eumetazoa2 genesCompare expression

Paralogy information comes from OMA : ENSOANG00000007284.

Cross-references

EnsemblENSOANG00000007284 (TCEA1)
HGNCHGNC:11612 (TCEA1)
EMBLAAPN01057157, AAPN01057158
Uniprot/SPTREMBLF7BX76, F7BX76_ORNAN

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