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O. anatinus Gene: SF3B6 - ENSOANG00000007627 - Ornithorhynchus anatinus (platypus)

General information

Ensembl IDENSOANG00000007627
NameSF3B6
Descriptionsplicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]
OrganismOrnithorhynchus anatinus (platypus)
Synonym(s)cgi-110, ht006, p14, sap14a, sf3b14a
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
2.67e3
  • 2.67e3
88.00
  • 88.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
4.29e3
  • 4.29e3
  • 5.86e3
80.68
  • 80.68
  • 73.59
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0018241prime adult stage
4.95e3
  • 4.95e3
77.73
  • 77.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.03e3
  • 5.03e3
77.33
  • 77.33
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
5.40e3
  • 5.40e3
75.67
  • 75.67
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
5.63e3
  • 5.63e3
74.66
  • 74.66
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.85e3
  • 5.85e3
73.67
  • 73.67
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.45e3
  • 6.45e3
70.96
  • 70.96
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.74e3
  • 6.74e3
69.66
  • 69.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSOANG00000007627.

Cross-references

EnsemblENSOANG00000007627 (SF3B6)
HGNCHGNC:30096 (SF3B6)
EMBLAAPN01423599, AAPN01423600
Uniprot/SPTREMBLF7C1W1, F7C1W1_ORNAN

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