O. anatinus Gene: SCN5A - ENSOANG00000014912 - Ornithorhynchus anatinus (platypus)

General information

Ensembl IDENSOANG00000014912
NameSCN5A
Descriptionsodium channel, voltage gated, type V alpha subunit [Source:HGNC Symbol;Acc:HGNC:10593]
OrganismOrnithorhynchus anatinus (platypus)
Synonym(s)cdcd2, cmd1e, cmpd2, hb1, hb2, hbbd, hh1, iccd, ivf, lqt3, nav1.5, pfhb1, sss1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.35e3
  • 2.35e3
89.42521
  • 89.42521
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
31.42611
  • 31.42611
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
24.88288
  • 24.88288
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
23.21776
  • 23.21776
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSOANG00000014912 (SCN5A)
HGNCHGNC:10593 (SCN5A)
Uniprot/SPTREMBLF6V8X9, F6V8X9_ORNAN

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