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O. cuniculus Gene: RBBP5 - ENSOCUG00000000095 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000000095
NameRBBP5
Descriptionretinoblastoma binding protein 5 [Source:HGNC Symbol;Acc:HGNC:9888]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)rbq3, swd1
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
3.42e3
  • 3.42e3
83.35
  • 83.35
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.32e3
  • 4.32e3
78.98
  • 78.98
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.33e3
  • 4.33e3
78.95
  • 78.95
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
4.99e3
  • 4.99e3
  • 5.04e3
  • 6.56e3
75.73
  • 75.73
  • 75.45
  • 68.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.05e3
  • 5.05e3
75.41
  • 75.41
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
5.64e3
  • 5.64e3
72.57
  • 72.57
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.72e3
  • 5.72e3
72.16
  • 72.16
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.08e3
  • 6.08e3
  • 6.80e3
70.43
  • 70.43
  • 66.93
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
6.25e3
  • 6.25e3
69.59
  • 69.59
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.41e3
  • 6.41e3
68.83
  • 68.83
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
6.56e3
  • 6.56e3
68.06
  • 68.06
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
6.90e3
  • 6.90e3
66.43
  • 66.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.97e3
  • 6.97e3
  • 7.13e3
66.07
  • 66.07
  • 65.32
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.37e3
  • 7.37e3
64.12
  • 64.12
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.94e3
  • 7.94e3
61.34
  • 61.34
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.18e3
  • 8.18e3
60.20
  • 60.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.68e3
  • 8.68e3
  • 9.17e3
57.75
  • 57.75
  • 55.38
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000000095.

Cross-references

EnsemblENSOCUG00000000095 (RBBP5)
HGNCHGNC:9888 (RBBP5)
EMBLAAGW02025357
Uniprot/SPTREMBLG1SCK8, G1SCK8_RABIT

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