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O. cuniculus Gene: NTM - ENSOCUG00000000213 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000000213
NameNTM
Descriptionneurotrimin [Source:HGNC Symbol;Acc:HGNC:17941]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)hnt, iglon2, ntri
Orthologs(s)23 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
1.57e3
  • 1.57e3
92.38
  • 92.38
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.68e3
  • 1.68e3
91.81
  • 91.81
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.87e3
  • 1.87e3
90.88
  • 90.88
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
6.56e3
  • 6.56e3
68.09
  • 68.09
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 1.19e4
44.17
  • 44.17
  • 42.01
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
42.25
  • 42.25
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
40.23
  • 40.23
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
40.22
  • 40.22
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.31e4
37.88
  • 37.88
  • 36.13
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
37.64
  • 37.64
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
35.84
  • 35.84
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.33e4
  • 1.33e4
35.05
  • 35.05
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
32.30
  • 32.30
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
1.41e4
  • 1.41e4
31.20
  • 31.20
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.44e4
  • 1.44e4
29.85
  • 29.85
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
29.00
  • 29.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
  • 1.54e4
  • 1.55e4
27.61
  • 27.61
  • 25.27
  • 24.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
23.69
  • 23.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000000213.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata4 genesCompare expression

Paralogy information comes from OMA : ENSOCUG00000000213.

Cross-references

EnsemblENSOCUG00000000213 (NTM)
HGNCHGNC:17941 (NTM)
EMBLAAGW02009833
Uniprot/SPTREMBLG1TK45, G1TK45_RABIT

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