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O. cuniculus Gene: CDH6 - ENSOCUG00000000360 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000000360
NameCDH6
Descriptioncadherin 6, type 2, K-cadherin (fetal kidney) [Source:HGNC Symbol;Acc:HGNC:1765]
OrganismOryctolagus cuniculus (rabbit)
Orthologs(s)17 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.19e3
  • 1.19e3
94.22
  • 94.22
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.76e3
  • 4.76e3
76.83
  • 76.83
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
6.38e3
  • 6.38e3
68.93
  • 68.93
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
7.23e3
  • 7.23e3
64.83
  • 64.83
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
7.86e3
  • 7.86e3
61.72
  • 61.72
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.39e3
  • 8.39e3
59.17
  • 59.17
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
9.00e3
  • 9.00e3
  • 1.17e4
  • 1.48e4
56.21
  • 56.21
  • 43.21
  • 27.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.69e3
  • 9.69e3
52.83
  • 52.83
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
44.67
  • 44.67
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
44.06
  • 44.06
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
42.31
  • 42.31
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
40.74
  • 40.74
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
40.73
  • 40.73
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
39.86
  • 39.86
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
  • 1.51e4
34.62
  • 34.62
  • 26.44
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
  • 1.50e4
28.23
  • 28.23
  • 27.17
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000000360.

Paralogs (same species)

Cross-references

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