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O. cuniculus Gene: SLC39A6 - ENSOCUG00000000692 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000000692
NameSLC39A6
Descriptionsolute carrier family 39 (zinc transporter), member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)liv-1
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.16e3
  • 1.16e3
  • 1.50e3
  • 3.80e3
94.34
  • 94.34
  • 92.72
  • 81.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.31e3
  • 1.31e3
93.64
  • 93.64
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.81e3
  • 1.81e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.24e3
  • 3.24e3
84.26
  • 84.26
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
3.83e3
  • 3.83e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.21e3
  • 4.21e3
79.54
  • 79.54
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
5.04e3
  • 5.04e3
75.47
  • 75.47
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
5.81e3
  • 5.81e3
71.73
  • 71.73
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.88e3
  • 5.88e3
71.41
  • 71.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.99e3
  • 5.99e3
  • 7.56e3
70.84
  • 70.84
  • 63.21
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.37e3
  • 6.37e3
  • 7.88e3
68.99
  • 68.99
  • 61.66
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.83e3
  • 6.83e3
66.76
  • 66.76
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
7.04e3
  • 7.04e3
65.75
  • 65.75
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.06e3
  • 7.06e3
  • 8.31e3
65.63
  • 65.63
  • 59.58
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.16e3
  • 7.16e3
65.16
  • 65.16
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.74e3
  • 8.74e3
57.47
  • 57.47
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
8.74e3
  • 8.74e3
57.47
  • 57.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000000692.

Cross-references

EnsemblENSOCUG00000000692 (SLC39A6)
HGNCHGNC:18607 (SLC39A6)
EMBLAAGW02032078, AAGW02032079
Uniprot/SPTREMBLG1SDV2, G1SDV2_RABIT

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